RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 PANX1Q96RD7 426 aa8.23□□□□□ -1.09
TPM3-213ENST00000368545 ECSITQ9BQ95 431 aa8.23□□□□□ -1.09
TPM3-213ENST00000368545 MIEF1Q9NQG6 463 aa8.23□□□□□ -1.09
TPM3-213ENST00000368545 TMEM131Q92545 1883 aa8.23□□□□□ -1.09
TPM3-213ENST00000368545 URADA6NGE7 173 aa8.23□□□□□ -1.09
TPM3-213ENST00000368545 NVLO15381 856 aaKnown RBP8.23□□□□□ -1.09
TPM3-213ENST00000368545 SCN2BO60939 215 aa8.23□□□□□ -1.09
TPM3-213ENST00000368545 GUCY1B2O75343 617 aa8.23□□□□□ -1.09
TPM3-213ENST00000368545 GBAP04062 536 aa8.23□□□□□ -1.09
TPM3-213ENST00000368545 ANXA6P08133 673 aa8.23□□□□□ -1.09
TPM3-213ENST00000368545 SLC35G6P0C7Q6 338 aa8.23□□□□□ -1.09
TPM3-213ENST00000368545 ZCCHC18P0CG32 403 aa8.23□□□□□ -1.09
TPM3-213ENST00000368545 PIM1P11309 404 aaPredicted RBP8.23□□□□□ -1.09
TPM3-213ENST00000368545 ANPEPP15144 967 aa8.23□□□□□ -1.09
TPM3-213ENST00000368545 DDCP20711 480 aa8.23□□□□□ -1.09
TPM3-213ENST00000368545 MAGP20916 626 aa8.23□□□□□ -1.09
TPM3-213ENST00000368545 PPIBP23284 216 aaKnown RBP8.23□□□□□ -1.09
TPM3-213ENST00000368545 GCKP35557 465 aa8.23□□□□□ -1.09
TPM3-213ENST00000368545 WNT3P56703 355 aa8.23□□□□□ -1.09
TPM3-213ENST00000368545 MTPNP58546 118 aa8.23□□□□□ -1.09
TPM3-213ENST00000368545 MRPS22P82650 360 aaKnown RBP8.23□□□□□ -1.09
TPM3-213ENST00000368545 C2orf80Q0P641 193 aa8.23□□□□□ -1.09
TPM3-213ENST00000368545 MTX3Q5HYI7 312 aa8.23□□□□□ -1.09
TPM3-213ENST00000368545 FIGLAQ6QHK4 219 aa8.23□□□□□ -1.09
TPM3-213ENST00000368545 SPATA24Q86W54 205 aa8.23□□□□□ -1.09
TPM3-213ENST00000368545 AQP12AQ8IXF9 295 aa8.23□□□□□ -1.09
TPM3-213ENST00000368545 NT5CQ8TCD5 201 aa8.23□□□□□ -1.09
TPM3-213ENST00000368545 PYDC1Q8WXC3 89 aa8.23□□□□□ -1.09
TPM3-213ENST00000368545 HTRA1Q92743 480 aa8.23□□□□□ -1.09
TPM3-213ENST00000368545 CPPED1Q9BRF8 314 aaPredicted RBP8.23□□□□□ -1.09
TPM3-213ENST00000368545 TBCDQ9BTW9 1192 aa8.23□□□□□ -1.09
TPM3-213ENST00000368545 THUMPD3Q9BV44 507 aaKnown RBP8.23□□□□□ -1.09
TPM3-213ENST00000368545 PCDHAC1Q9H158 963 aa8.23□□□□□ -1.09
TPM3-213ENST00000368545 TBC1D23Q9NUY8 699 aa8.23□□□□□ -1.09
TPM3-213ENST00000368545 HRASLS2Q9NWW9 162 aa8.23□□□□□ -1.09
TPM3-213ENST00000368545 SLC25A37Q9NYZ2 338 aa8.23□□□□□ -1.09
TPM3-213ENST00000368545 SH3BP4Q9P0V3 963 aa8.23□□□□□ -1.09
TPM3-213ENST00000368545 ZNF282Q9UDV7 671 aaPredicted RBP8.23□□□□□ -1.09
TPM3-213ENST00000368545 CSNK1G3Q9Y6M4 447 aa8.23□□□□□ -1.09
TPM3-213ENST00000368545 ASCC3Q8N3C0 2202 aaKnown RBP8.22□□□□□ -1.09
TPM3-213ENST00000368545 A0A0A6YYD5 115 aa8.22□□□□□ -1.09
TPM3-213ENST00000368545 TCRBV3S1A0A5B6 114 aa8.22□□□□□ -1.09
TPM3-213ENST00000368545 EVPLLA8MZ36 301 aa8.22□□□□□ -1.09
TPM3-213ENST00000368545 FAM220BPB1ANY3 271 aa8.22□□□□□ -1.09
TPM3-213ENST00000368545 ARPC2O15144 300 aa8.22□□□□□ -1.09
TPM3-213ENST00000368545 YY2O15391 372 aa8.22□□□□□ -1.09
TPM3-213ENST00000368545 ERI3O43414 337 aaKnown RBP8.22□□□□□ -1.09
TPM3-213ENST00000368545 GMNNO75496 209 aa8.22□□□□□ -1.09
TPM3-213ENST00000368545 PIAS2O75928 621 aa8.22□□□□□ -1.09
TPM3-213ENST00000368545 IL3P08700 152 aa8.22□□□□□ -1.09
TPM3-213ENST00000368545 LAMP1P11279 417 aa8.22□□□□□ -1.09
TPM3-213ENST00000368545 PTPN6P29350 595 aa8.22□□□□□ -1.09
TPM3-213ENST00000368545 MSX2P35548 267 aaPredicted RBP8.22□□□□□ -1.09
TPM3-213ENST00000368545 PLIN5Q00G26 463 aa8.22□□□□□ -1.09
TPM3-213ENST00000368545 TOR1AIP1Q5JTV8 583 aa8.22□□□□□ -1.09
TPM3-213ENST00000368545 LRRC74BQ6ZQY2 392 aa8.22□□□□□ -1.09
TPM3-213ENST00000368545 ASPGQ86U10 573 aa8.22□□□□□ -1.09
TPM3-213ENST00000368545 ANKRD46Q86W74 232 aa8.22□□□□□ -1.09
TPM3-213ENST00000368545 C17orf82Q86X59 251 aaPredicted RBP8.22□□□□□ -1.09
TPM3-213ENST00000368545 SPPL2CQ8IUH8 684 aa8.22□□□□□ -1.09
TPM3-213ENST00000368545 TMEM126BQ8IUX1 230 aa8.22□□□□□ -1.09
TPM3-213ENST00000368545 MSRB3Q8IXL7 192 aa8.22□□□□□ -1.09
TPM3-213ENST00000368545 ZCCHC7Q8N3Z6 543 aaKnown RBP8.22□□□□□ -1.09
TPM3-213ENST00000368545 ARL14Q8N4G2 192 aa8.22□□□□□ -1.09
TPM3-213ENST00000368545 TRIML2Q8N7C3 387 aa8.22□□□□□ -1.09
TPM3-213ENST00000368545 RSC1A1Q92681 617 aa8.22□□□□□ -1.09
TPM3-213ENST00000368545 POP5Q969H6 163 aaKnown RBP8.22□□□□□ -1.09
TPM3-213ENST00000368545 MS4A6EQ96DS6 147 aa8.22□□□□□ -1.09
TPM3-213ENST00000368545 DUS3LQ96G46 650 aaKnown RBP8.22□□□□□ -1.09
TPM3-213ENST00000368545 EFHD1Q9BUP0 239 aa8.22□□□□□ -1.09
TPM3-213ENST00000368545 FAIM2Q9BWQ8 316 aa8.22□□□□□ -1.09
TPM3-213ENST00000368545 ROGDIQ9GZN7 287 aa8.22□□□□□ -1.09
TPM3-213ENST00000368545 ABCG4Q9H172 646 aa8.22□□□□□ -1.09
TPM3-213ENST00000368545 GAREM1Q9H706 876 aa8.22□□□□□ -1.09
TPM3-213ENST00000368545 LHX9Q9NQ69 397 aa8.22□□□□□ -1.09
TPM3-213ENST00000368545 C6orf203Q9P0P8 240 aaPredicted RBP8.22□□□□□ -1.09
TPM3-213ENST00000368545 POMT2Q9UKY4 750 aa8.22□□□□□ -1.09
TPM3-213ENST00000368545 PCDHGB4Q9UN71 923 aa8.22□□□□□ -1.09
TPM3-213ENST00000368545 GMEB1Q9Y692 573 aa8.22□□□□□ -1.09
TPM3-213ENST00000368545 ZNF462Q96JM2 2506 aa8.22□□□□□ -1.09
TPM3-213ENST00000368545 NOBOXO60393 691 aa8.21□□□□□ -1.09
TPM3-213ENST00000368545 KLHL18O94889 574 aa8.21□□□□□ -1.09
TPM3-213ENST00000368545 ABHD16AO95870 558 aa8.21□□□□□ -1.09
TPM3-213ENST00000368545 ITGA5P08648 1049 aa8.21□□□□□ -1.09
TPM3-213ENST00000368545 ZNF10P21506 573 aaPredicted RBP8.21□□□□□ -1.09
TPM3-213ENST00000368545 HIST1H1TP22492 207 aaPredicted RBP8.21□□□□□ -1.09
TPM3-213ENST00000368545 CDKN2CP42773 168 aa8.21□□□□□ -1.09
TPM3-213ENST00000368545 CAPZBP47756 277 aa8.21□□□□□ -1.09
TPM3-213ENST00000368545 PTDSS1P48651 473 aaKnown RBP8.21□□□□□ -1.09
TPM3-213ENST00000368545 ERFP50548 548 aa8.21□□□□□ -1.09
TPM3-213ENST00000368545 PLA2G16P53816 162 aa8.21□□□□□ -1.09
TPM3-213ENST00000368545 MAZP56270 477 aaKnown RBP8.21□□□□□ -1.09
TPM3-213ENST00000368545 ABHD18Q0P651 414 aa8.21□□□□□ -1.09
TPM3-213ENST00000368545 CR1LQ2VPA4 569 aa8.21□□□□□ -1.09
TPM3-213ENST00000368545 MANEAQ5SRI9 462 aa8.21□□□□□ -1.09
TPM3-213ENST00000368545 PHF19Q5T6S3 580 aa8.21□□□□□ -1.09
TPM3-213ENST00000368545 TRIM73Q86UV7 250 aa8.21□□□□□ -1.09
TPM3-213ENST00000368545 IFNEQ86WN2 208 aa8.21□□□□□ -1.09
TPM3-213ENST00000368545 BCL6BQ8N143 479 aaPredicted RBP8.21□□□□□ -1.09
TPM3-213ENST00000368545 CAMKVQ8NCB2 501 aa8.21□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms