RNA–Protein interactions for RNA: ENST00000368530.6

TPM3-210, Transcript of tropomyosin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TPM3, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-210ENST00000368530 ABHD17CQ6PCB6 329 aa9.31□□□□□ -0.92
TPM3-210ENST00000368530 KIRREL2Q6UWL6 708 aa9.31□□□□□ -0.92
TPM3-210ENST00000368530 OVCH1Q7RTY7 1134 aa9.31□□□□□ -0.92
TPM3-210ENST00000368530 SLC34A3Q8N130 599 aa9.31□□□□□ -0.92
TPM3-210ENST00000368530 KCT2Q8NC54 265 aa9.31□□□□□ -0.92
TPM3-210ENST00000368530 OR2L5Q8NG80 312 aa9.31□□□□□ -0.92
TPM3-210ENST00000368530 GRHL3Q8TE85 626 aa9.31□□□□□ -0.92
TPM3-210ENST00000368530 FAR1Q8WVX9 515 aa9.31□□□□□ -0.92
TPM3-210ENST00000368530 ZNF184Q99676 751 aaPredicted RBP9.31□□□□□ -0.92
TPM3-210ENST00000368530 WDR77Q9BQA1 342 aaPredicted RBP9.31□□□□□ -0.92
TPM3-210ENST00000368530 MESP1Q9BRJ9 268 aa9.31□□□□□ -0.92
TPM3-210ENST00000368530 SLC26A1Q9H2B4 701 aa9.31□□□□□ -0.92
TPM3-210ENST00000368530 DDX31Q9H8H2 851 aaKnown RBP9.31□□□□□ -0.92
TPM3-210ENST00000368530 TPT1P8Q9HAU6 139 aa9.31□□□□□ -0.92
TPM3-210ENST00000368530 PRDM7Q9NQW5 492 aa9.31□□□□□ -0.92
TPM3-210ENST00000368530 NDOR1Q9UHB4 597 aa9.31□□□□□ -0.92
TPM3-210ENST00000368530 GPN3Q9UHW5 284 aaPredicted RBP9.31□□□□□ -0.92
TPM3-210ENST00000368530 FBXL4Q9UKA2 621 aa9.31□□□□□ -0.92
TPM3-210ENST00000368530 FBXW2Q9UKT8 454 aa9.31□□□□□ -0.92
TPM3-210ENST00000368530 SRPK3Q9UPE1 567 aa9.31□□□□□ -0.92
TPM3-210ENST00000368530 LRRC42Q9Y546 428 aa9.31□□□□□ -0.92
TPM3-210ENST00000368530 HS3ST3B1Q9Y662 390 aa9.31□□□□□ -0.92
TPM3-210ENST00000368530 ANKRD17O75179 2603 aaKnown RBP9.3□□□□□ -0.92
TPM3-210ENST00000368530 LOC105369274A0A096LPK9 316 aa9.3□□□□□ -0.92
TPM3-210ENST00000368530 LOC102723532A0A0G2JNH3 316 aa9.3□□□□□ -0.92
TPM3-210ENST00000368530 C1orf226A1L170 272 aa9.3□□□□□ -0.92
TPM3-210ENST00000368530 GLOD5A6NK44 160 aa9.3□□□□□ -0.92
TPM3-210ENST00000368530 SAC3D1A6NKF1 404 aa9.3□□□□□ -0.92
TPM3-210ENST00000368530 PDPK1O15530 556 aa9.3□□□□□ -0.92
TPM3-210ENST00000368530 SCELO95171 688 aa9.3□□□□□ -0.92
TPM3-210ENST00000368530 ALBP02768 609 aa9.3□□□□□ -0.92
TPM3-210ENST00000368530 SLC35G6P0C7Q6 338 aa9.3□□□□□ -0.92
TPM3-210ENST00000368530 HIST1H1TP22492 207 aaPredicted RBP9.3□□□□□ -0.92
TPM3-210ENST00000368530 CHI3L1P36222 383 aaPredicted RBP9.3□□□□□ -0.92
TPM3-210ENST00000368530 TSFMP43897 325 aaKnown RBP9.3□□□□□ -0.92
TPM3-210ENST00000368530 AQP4P55087 323 aa9.3□□□□□ -0.92
TPM3-210ENST00000368530 SNRPNP63162 240 aaKnown RBP9.3□□□□□ -0.92
TPM3-210ENST00000368530 HSPB3Q12988 150 aa9.3□□□□□ -0.92
TPM3-210ENST00000368530 NKG7Q16617 165 aa9.3□□□□□ -0.92
TPM3-210ENST00000368530 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.3□□□□□ -0.92
TPM3-210ENST00000368530 NDUFAF5Q5TEU4 345 aa9.3□□□□□ -0.92
TPM3-210ENST00000368530 FRMPD2BQ6IN97 320 aa9.3□□□□□ -0.92
TPM3-210ENST00000368530 ENPP6Q6UWR7 440 aa9.3□□□□□ -0.92
TPM3-210ENST00000368530 GALNT10Q86SR1 603 aa9.3□□□□□ -0.92
TPM3-210ENST00000368530 PDSS2Q86YH6 399 aa9.3□□□□□ -0.92
TPM3-210ENST00000368530 MCATQ8IVS2 390 aaKnown RBP9.3□□□□□ -0.92
TPM3-210ENST00000368530 ZZZ3Q8IYH5 903 aa9.3□□□□□ -0.92
TPM3-210ENST00000368530 OR4N4Q8N0Y3 316 aa9.3□□□□□ -0.92
TPM3-210ENST00000368530 GALNT4Q8N4A0 578 aa9.3□□□□□ -0.92
TPM3-210ENST00000368530 FAM86B1Q8N7N1 296 aa9.3□□□□□ -0.92
TPM3-210ENST00000368530 ACOT4Q8N9L9 421 aa9.3□□□□□ -0.92
TPM3-210ENST00000368530 ICA1LQ8NDH6 482 aa9.3□□□□□ -0.92
TPM3-210ENST00000368530 ZFP90Q8TF47 636 aa9.3□□□□□ -0.92
TPM3-210ENST00000368530 ZDHHC19Q8WVZ1 309 aaPredicted RBP9.3□□□□□ -0.92
TPM3-210ENST00000368530 TM9SF4Q92544 642 aa9.3□□□□□ -0.92
TPM3-210ENST00000368530 N4BP2L2Q92802 583 aaPredicted RBP9.3□□□□□ -0.92
TPM3-210ENST00000368530 FKBP10Q96AY3 582 aa9.3□□□□□ -0.92
TPM3-210ENST00000368530 REXO5Q96IC2 774 aaKnown RBP9.3□□□□□ -0.92
TPM3-210ENST00000368530 RNF145Q96MT1 663 aa9.3□□□□□ -0.92
TPM3-210ENST00000368530 ZNF285Q96NJ3 590 aa9.3□□□□□ -0.92
TPM3-210ENST00000368530 KCNC2Q96PR1 638 aa9.3□□□□□ -0.92
TPM3-210ENST00000368530 OR2A5Q96R48 311 aa9.3□□□□□ -0.92
TPM3-210ENST00000368530 SLC35A5Q9BS91 424 aa9.3□□□□□ -0.92
TPM3-210ENST00000368530 SARGQ9BW04 601 aa9.3□□□□□ -0.92
TPM3-210ENST00000368530 WDR54Q9H977 334 aa9.3□□□□□ -0.92
TPM3-210ENST00000368530 AGPAT4Q9NRZ5 378 aa9.3□□□□□ -0.92
TPM3-210ENST00000368530 ARMC1Q9NVT9 282 aa9.3□□□□□ -0.92
TPM3-210ENST00000368530 ZNF282Q9UDV7 671 aaPredicted RBP9.3□□□□□ -0.92
TPM3-210ENST00000368530 SNX8Q9Y5X2 465 aa9.3□□□□□ -0.92
TPM3-210ENST00000368530 A0A1W2PR48 441 aa9.29□□□□□ -0.92
TPM3-210ENST00000368530 VSTM2BA6NLU5 285 aa9.29□□□□□ -0.92
TPM3-210ENST00000368530 H0YGG7 62 aa9.29□□□□□ -0.92
TPM3-210ENST00000368530 HNRNPRO43390 633 aaKnown RBP9.29□□□□□ -0.92
TPM3-210ENST00000368530 MED26O95402 600 aa9.29□□□□□ -0.92
TPM3-210ENST00000368530 SERPINA1P01009 418 aa9.29□□□□□ -0.92
TPM3-210ENST00000368530 STSP08842 583 aa9.29□□□□□ -0.92
TPM3-210ENST00000368530 ZCCHC18P0CG32 403 aa9.29□□□□□ -0.92
TPM3-210ENST00000368530 IL1RNP18510 177 aa9.29□□□□□ -0.92
TPM3-210ENST00000368530 ATP6V1C1P21283 382 aa9.29□□□□□ -0.92
TPM3-210ENST00000368530 ALAS2P22557 587 aa9.29□□□□□ -0.92
TPM3-210ENST00000368530 ITGA3P26006 1051 aa9.29□□□□□ -0.92
TPM3-210ENST00000368530 PTGER1P34995 402 aa9.29□□□□□ -0.92
TPM3-210ENST00000368530 CRATP43155 626 aa9.29□□□□□ -0.92
TPM3-210ENST00000368530 MANFP55145 182 aaKnown RBP9.29□□□□□ -0.92
TPM3-210ENST00000368530 ARF3P61204 181 aaPredicted RBP9.29□□□□□ -0.92
TPM3-210ENST00000368530 TRA2BP62995 288 aaKnown RBP9.29□□□□□ -0.92
TPM3-210ENST00000368530 TGM3Q08188 693 aa9.29□□□□□ -0.92
TPM3-210ENST00000368530 LRRC74AQ0VAA2 488 aa9.29□□□□□ -0.92
TPM3-210ENST00000368530 ELOAQ14241 798 aaKnown RBP9.29□□□□□ -0.92
TPM3-210ENST00000368530 VMACQ2NL98 169 aa9.29□□□□□ -0.92
TPM3-210ENST00000368530 LRRC23Q53EV4 343 aaPredicted RBP9.29□□□□□ -0.92
TPM3-210ENST00000368530 COX20Q5RI15 118 aa9.29□□□□□ -0.92
TPM3-210ENST00000368530 C18orf63Q68DL7 685 aa9.29□□□□□ -0.92
TPM3-210ENST00000368530 ZNF324BQ6AW86 544 aaPredicted RBP9.29□□□□□ -0.92
TPM3-210ENST00000368530 TTLL10Q6ZVT0 673 aa9.29□□□□□ -0.92
TPM3-210ENST00000368530 SERPINA11Q86U17 422 aa9.29□□□□□ -0.92
TPM3-210ENST00000368530 GOLM1Q8NBJ4 401 aa9.29□□□□□ -0.92
TPM3-210ENST00000368530 SRFBP1Q8NEF9 429 aaKnown RBP9.29□□□□□ -0.92
TPM3-210ENST00000368530 OR10Q1Q8NGQ4 319 aa9.29□□□□□ -0.92
TPM3-210ENST00000368530 NT5CQ8TCD5 201 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms