RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 PSD2Q9BQI7 771 aa11.3□□□□□ -0.6
USF1-203ENST00000368021 NDC1Q9BTX1 674 aa11.3□□□□□ -0.6
USF1-203ENST00000368021 A4GALTQ9NPC4 353 aa11.3□□□□□ -0.6
USF1-203ENST00000368021 DIABLOQ9NR28 239 aa11.3□□□□□ -0.6
USF1-203ENST00000368021 AGPAT4Q9NRZ5 378 aa11.3□□□□□ -0.6
USF1-203ENST00000368021 HCN3Q9P1Z3 774 aa11.3□□□□□ -0.6
USF1-203ENST00000368021 CDC14AQ9UNH5 594 aa11.3□□□□□ -0.6
USF1-203ENST00000368021 SRPK3Q9UPE1 567 aa11.3□□□□□ -0.6
USF1-203ENST00000368021 N6AMT1Q9Y5N5 214 aa11.3□□□□□ -0.6
USF1-203ENST00000368021 SCN2AQ99250 2005 aa11.3□□□□□ -0.6
USF1-203ENST00000368021 ZFHX4Q86UP3 3567 aa11.29□□□□□ -0.6
USF1-203ENST00000368021 A0A087WV62 115 aa11.29□□□□□ -0.6
USF1-203ENST00000368021 D6RAR5 112 aa11.29□□□□□ -0.6
USF1-203ENST00000368021 HMGN4O00479 90 aa11.29□□□□□ -0.6
USF1-203ENST00000368021 NDUFB5O43674 189 aa11.29□□□□□ -0.6
USF1-203ENST00000368021 CTNSO60931 367 aa11.29□□□□□ -0.6
USF1-203ENST00000368021 DKK1O94907 266 aa11.29□□□□□ -0.6
USF1-203ENST00000368021 SLC35E2P0CK97 266 aa11.29□□□□□ -0.6
USF1-203ENST00000368021 FASP25445 335 aa11.29□□□□□ -0.6
USF1-203ENST00000368021 EIF2B2P49770 351 aaKnown RBP11.29□□□□□ -0.6
USF1-203ENST00000368021 MAPK10P53779 464 aa11.29□□□□□ -0.6
USF1-203ENST00000368021 IGLV3-21P80748 117 aaPredicted RBP11.29□□□□□ -0.6
USF1-203ENST00000368021 BIKQ13323 160 aa11.29□□□□□ -0.6
USF1-203ENST00000368021 ILKQ13418 452 aa11.29□□□□□ -0.6
USF1-203ENST00000368021 TRA2AQ13595 282 aaKnown RBP eCLIP11.29□□□□□ -0.6
USF1-203ENST00000368021 NADK2Q4G0N4 442 aa11.29□□□□□ -0.6
USF1-203ENST00000368021 OGFRL1Q5TC84 451 aaPredicted RBP11.29□□□□□ -0.6
USF1-203ENST00000368021 TTLL10Q6ZVT0 673 aa11.29□□□□□ -0.6
USF1-203ENST00000368021 CBLL1Q75N03 491 aa11.29□□□□□ -0.6
USF1-203ENST00000368021 SLITRK4Q8IW52 837 aa11.29□□□□□ -0.6
USF1-203ENST00000368021 OR4N5Q8IXE1 308 aa11.29□□□□□ -0.6
USF1-203ENST00000368021 OR2L13Q8N349 312 aa11.29□□□□□ -0.6
USF1-203ENST00000368021 ADCY4Q8NFM4 1077 aa11.29□□□□□ -0.6
USF1-203ENST00000368021 OR51Q1Q8NH59 317 aa11.29□□□□□ -0.6
USF1-203ENST00000368021 ANGPTL6Q8NI99 470 aa11.29□□□□□ -0.6
USF1-203ENST00000368021 FBXO30Q8TB52 745 aa11.29□□□□□ -0.6
USF1-203ENST00000368021 GIMAP1Q8WWP7 306 aa11.29□□□□□ -0.6
USF1-203ENST00000368021 LRTOMTQ8WZ04 291 aa11.29□□□□□ -0.6
USF1-203ENST00000368021 COL26A1Q96A83 441 aa11.29□□□□□ -0.6
USF1-203ENST00000368021 PPWD1Q96BP3 646 aaKnown RBP11.29□□□□□ -0.6
USF1-203ENST00000368021 HSPBAP1Q96EW2 488 aa11.29□□□□□ -0.6
USF1-203ENST00000368021 PEX11GQ96HA9 241 aa11.29□□□□□ -0.6
USF1-203ENST00000368021 CCDC74BQ96LY2 380 aa11.29□□□□□ -0.6
USF1-203ENST00000368021 OR1F2PQ96R84 312 aa11.29□□□□□ -0.6
USF1-203ENST00000368021 SEPHS2Q99611 448 aa11.29□□□□□ -0.6
USF1-203ENST00000368021 CHID1Q9BWS9 393 aa11.29□□□□□ -0.6
USF1-203ENST00000368021 CNOT11Q9UKZ1 510 aaKnown RBP11.29□□□□□ -0.6
USF1-203ENST00000368021 ANGPT4Q9Y264 503 aa11.29□□□□□ -0.6
USF1-203ENST00000368021 TMEM184BQ9Y519 407 aaPredicted RBP11.29□□□□□ -0.6
USF1-203ENST00000368021 ZZEF1O43149 2961 aa11.29□□□□□ -0.6
USF1-203ENST00000368021 TPRP12270 2363 aaKnown RBP11.29□□□□□ -0.6
USF1-203ENST00000368021 A0A1B0GX78 115 aa11.28□□□□□ -0.6
USF1-203ENST00000368021 UPK1AO00322 258 aa11.28□□□□□ -0.6
USF1-203ENST00000368021 RGS13O14921 159 aa11.28□□□□□ -0.6
USF1-203ENST00000368021 DSCR3O14972 297 aa11.28□□□□□ -0.6
USF1-203ENST00000368021 ASNA1O43681 348 aa11.28□□□□□ -0.6
USF1-203ENST00000368021 PLOD3O60568 738 aa11.28□□□□□ -0.6
USF1-203ENST00000368021 TIPRLO75663 272 aa11.28□□□□□ -0.6
USF1-203ENST00000368021 PRKD3O94806 890 aa11.28□□□□□ -0.6
USF1-203ENST00000368021 HMGN2P05204 90 aaKnown RBP11.28□□□□□ -0.6
USF1-203ENST00000368021 TFPTP0C1Z6 253 aa11.28□□□□□ -0.6
USF1-203ENST00000368021 MATN1P21941 496 aa11.28□□□□□ -0.6
USF1-203ENST00000368021 PEX2P28328 305 aa11.28□□□□□ -0.6
USF1-203ENST00000368021 KHKP50053 298 aa11.28□□□□□ -0.6
USF1-203ENST00000368021 CASP9P55211 416 aa11.28□□□□□ -0.6
USF1-203ENST00000368021 HSD17B7P56937 341 aa11.28□□□□□ -0.6
USF1-203ENST00000368021 PCBP3P57721 371 aaKnown RBP11.28□□□□□ -0.6
USF1-203ENST00000368021 RPS26P62854 115 aaKnown RBP11.28□□□□□ -0.6
USF1-203ENST00000368021 DSG2Q14126 1118 aa11.28□□□□□ -0.6
USF1-203ENST00000368021 LTB4RQ15722 352 aa11.28□□□□□ -0.6
USF1-203ENST00000368021 ZNF628Q5EBL2 1059 aa11.28□□□□□ -0.6
USF1-203ENST00000368021 CRB2Q5IJ48 1285 aa11.28□□□□□ -0.6
USF1-203ENST00000368021 REEP3Q6NUK4 255 aa11.28□□□□□ -0.6
USF1-203ENST00000368021 TNFAIP8L2Q6P589 184 aaPredicted RBP11.28□□□□□ -0.6
USF1-203ENST00000368021 ENPP6Q6UWR7 440 aa11.28□□□□□ -0.6
USF1-203ENST00000368021 DCDC5Q6ZRR9 648 aa11.28□□□□□ -0.6
USF1-203ENST00000368021 EIF3MQ7L2H7 374 aaKnown RBP11.28□□□□□ -0.6
USF1-203ENST00000368021 SZRD1Q7Z422 152 aa11.28□□□□□ -0.6
USF1-203ENST00000368021 SHISA5Q8N114 240 aa11.28□□□□□ -0.6
USF1-203ENST00000368021 FAM86B1Q8N7N1 296 aa11.28□□□□□ -0.6
USF1-203ENST00000368021 C7orf57Q8NEG2 295 aa11.28□□□□□ -0.6
USF1-203ENST00000368021 NUP43Q8NFH3 380 aa11.28□□□□□ -0.6
USF1-203ENST00000368021 SLC47A1Q96FL8 570 aa11.28□□□□□ -0.6
USF1-203ENST00000368021 PYURFQ96I23 114 aa11.28□□□□□ -0.6
USF1-203ENST00000368021 MS4A4EQ96PG1 132 aa11.28□□□□□ -0.6
USF1-203ENST00000368021 SERHL2Q9H4I8 314 aa11.28□□□□□ -0.6
USF1-203ENST00000368021 DDX18Q9NVP1 670 aaKnown RBP11.28□□□□□ -0.6
USF1-203ENST00000368021 WASF3Q9UPY6 502 aa11.28□□□□□ -0.6
USF1-203ENST00000368021 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.28□□□□□ -0.6
USF1-203ENST00000368021 M0QX08 132 aa11.28□□□□□ -0.6
USF1-203ENST00000368021 GCM2O75603 506 aaPredicted RBP11.28□□□□□ -0.6
USF1-203ENST00000368021 ALAS2P22557 587 aa11.28□□□□□ -0.6
USF1-203ENST00000368021 MAGEA2P43356 314 aa11.28□□□□□ -0.6
USF1-203ENST00000368021 XCR1P46094 333 aa11.28□□□□□ -0.6
USF1-203ENST00000368021 CRYBA2P53672 197 aa11.28□□□□□ -0.6
USF1-203ENST00000368021 MAT1AQ00266 395 aaKnown RBP11.28□□□□□ -0.6
USF1-203ENST00000368021 E2F1Q01094 437 aa11.28□□□□□ -0.6
USF1-203ENST00000368021 RIPPLY1Q0D2K3 151 aa11.28□□□□□ -0.6
USF1-203ENST00000368021 TARDBPQ13148 414 aaKnown RBP eCLIP11.28□□□□□ -0.6
USF1-203ENST00000368021 LASP1Q14847 261 aaKnown RBP11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms