RNA–Protein interactions for RNA: ENST00000366897.5

PRKN-205, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,877 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-205ENST00000366897 HS3ST2Q9Y278 367 aa12.8□□□□□ -0.36
PRKN-205ENST00000366897 NTNG1Q9Y2I2 539 aa12.8□□□□□ -0.36
PRKN-205ENST00000366897 CIB4A0PJX0 185 aa12.8□□□□□ -0.36
PRKN-205ENST00000366897 GABRPO00591 440 aa12.8□□□□□ -0.36
PRKN-205ENST00000366897 ORC5O43913 435 aa12.8□□□□□ -0.36
PRKN-205ENST00000366897 HCN1O60741 890 aa12.8□□□□□ -0.36
PRKN-205ENST00000366897 EPPINO95925 133 aa12.8□□□□□ -0.36
PRKN-205ENST00000366897 TBX6O95947 436 aaPredicted RBP12.8□□□□□ -0.36
PRKN-205ENST00000366897 SOD1P00441 154 aa12.8□□□□□ -0.36
PRKN-205ENST00000366897 TFPIP10646 304 aa12.8□□□□□ -0.36
PRKN-205ENST00000366897 SRP9P49458 86 aaKnown RBP12.8□□□□□ -0.36
PRKN-205ENST00000366897 TPBGQ13641 420 aa12.8□□□□□ -0.36
PRKN-205ENST00000366897 DEFB128Q7Z7B8 93 aa12.8□□□□□ -0.36
PRKN-205ENST00000366897 ANKK1Q8NFD2 765 aa12.8□□□□□ -0.36
PRKN-205ENST00000366897 TMEM163Q8TC26 289 aa12.8□□□□□ -0.36
PRKN-205ENST00000366897 TRMT2BQ96GJ1 504 aaKnown RBP12.8□□□□□ -0.36
PRKN-205ENST00000366897 C19orf43Q9BQ61 176 aa12.8□□□□□ -0.36
PRKN-205ENST00000366897 OR51I1Q9H343 314 aa12.8□□□□□ -0.36
PRKN-205ENST00000366897 NIPAL2Q9H841 368 aa12.8□□□□□ -0.36
PRKN-205ENST00000366897 SLC28A3Q9HAS3 691 aa12.8□□□□□ -0.36
PRKN-205ENST00000366897 SIRT3Q9NTG7 399 aaPredicted RBP12.8□□□□□ -0.36
PRKN-205ENST00000366897 EXTL2Q9UBQ6 330 aa12.8□□□□□ -0.36
PRKN-205ENST00000366897 SPEF1Q9Y4P9 236 aa12.8□□□□□ -0.36
PRKN-205ENST00000366897 INSL5Q9Y5Q6 135 aa12.8□□□□□ -0.36
PRKN-205ENST00000366897 FAM183AA6NL82 134 aa12.79□□□□□ -0.36
PRKN-205ENST00000366897 PDPK1O15530 556 aa12.79□□□□□ -0.36
PRKN-205ENST00000366897 SLC2A10O95528 541 aa12.79□□□□□ -0.36
PRKN-205ENST00000366897 PSMB5P28074 263 aa12.79□□□□□ -0.36
PRKN-205ENST00000366897 VIPR1P32241 457 aa12.79□□□□□ -0.36
PRKN-205ENST00000366897 CCT3P49368 545 aaKnown RBP12.79□□□□□ -0.36
PRKN-205ENST00000366897 EPHB3P54753 998 aa12.79□□□□□ -0.36
PRKN-205ENST00000366897 C3orf38Q5JPI3 329 aa12.79□□□□□ -0.36
PRKN-205ENST00000366897 TOR2AQ5JU69 321 aa12.79□□□□□ -0.36
PRKN-205ENST00000366897 KRT74Q7RTS7 529 aa12.79□□□□□ -0.36
PRKN-205ENST00000366897 DDX53Q86TM3 631 aaKnown RBP12.79□□□□□ -0.36
PRKN-205ENST00000366897 SLC9B2Q86UD5 537 aa12.79□□□□□ -0.36
PRKN-205ENST00000366897 KLBQ86Z14 1044 aa12.79□□□□□ -0.36
PRKN-205ENST00000366897 SLC43A3Q8NBI5 491 aa12.79□□□□□ -0.36
PRKN-205ENST00000366897 GALNT6Q8NCL4 622 aa12.79□□□□□ -0.36
PRKN-205ENST00000366897 IGSF21Q96ID5 467 aa12.79□□□□□ -0.36
PRKN-205ENST00000366897 MACROD1Q9BQ69 325 aa12.79□□□□□ -0.36
PRKN-205ENST00000366897 FUZQ9BT04 418 aa12.79□□□□□ -0.36
PRKN-205ENST00000366897 ZNF222Q9UK12 451 aa12.79□□□□□ -0.36
PRKN-205ENST00000366897 A0A0A6YYJ9 748 aa12.79□□□□□ -0.36
PRKN-205ENST00000366897 ZC3H12DA2A288 527 aaKnown RBP12.79□□□□□ -0.36
PRKN-205ENST00000366897 FOXE1O00358 373 aaPredicted RBP12.79□□□□□ -0.36
PRKN-205ENST00000366897 ACP2P11117 423 aa12.79□□□□□ -0.36
PRKN-205ENST00000366897 TIMP2P16035 220 aa12.79□□□□□ -0.36
PRKN-205ENST00000366897 SELPP16109 830 aa12.79□□□□□ -0.36
PRKN-205ENST00000366897 GABRA5P31644 462 aa12.79□□□□□ -0.36
PRKN-205ENST00000366897 ATP6V1E1P36543 226 aa12.79□□□□□ -0.36
PRKN-205ENST00000366897 RECQLP46063 649 aaPredicted RBP12.79□□□□□ -0.36
PRKN-205ENST00000366897 PRLHRP49683 370 aa12.79□□□□□ -0.36
PRKN-205ENST00000366897 GPR176Q14439 515 aa12.79□□□□□ -0.36
PRKN-205ENST00000366897 ZNF750Q32MQ0 723 aa12.79□□□□□ -0.36
PRKN-205ENST00000366897 MTFR2Q6P444 385 aa12.79□□□□□ -0.36
PRKN-205ENST00000366897 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.79□□□□□ -0.36
PRKN-205ENST00000366897 OR8H3Q8N146 312 aa12.79□□□□□ -0.36
PRKN-205ENST00000366897 C9orf62Q8N4C0 152 aa12.79□□□□□ -0.36
PRKN-205ENST00000366897 DUSP18Q8NEJ0 188 aa12.79□□□□□ -0.36
PRKN-205ENST00000366897 SMPDL3AQ92484 453 aa12.79□□□□□ -0.36
PRKN-205ENST00000366897 FAM46AQ96IP4 442 aaKnown RBP12.79□□□□□ -0.36
PRKN-205ENST00000366897 MARVELD1Q9BSK0 173 aa12.79□□□□□ -0.36
PRKN-205ENST00000366897 BEX1Q9HBH7 125 aa12.79□□□□□ -0.36
PRKN-205ENST00000366897 A4GALTQ9NPC4 353 aa12.79□□□□□ -0.36
PRKN-205ENST00000366897 ATP13A2Q9NQ11 1180 aa12.79□□□□□ -0.36
PRKN-205ENST00000366897 MRPL17Q9NRX2 175 aaKnown RBP12.79□□□□□ -0.36
PRKN-205ENST00000366897 CUEDC1Q9NWM3 386 aaPredicted RBP12.79□□□□□ -0.36
PRKN-205ENST00000366897 SLC25A13Q9UJS0 675 aa12.79□□□□□ -0.36
PRKN-205ENST00000366897 ZFR2Q9UPR6 939 aaKnown RBP12.79□□□□□ -0.36
PRKN-205ENST00000366897 CTSLP07711 333 aa12.79□□□□□ -0.36
PRKN-205ENST00000366897 NNMTP40261 264 aa12.79□□□□□ -0.36
PRKN-205ENST00000366897 SLC1A3P43003 542 aa12.79□□□□□ -0.36
PRKN-205ENST00000366897 KLHL22Q53GT1 634 aa12.79□□□□□ -0.36
PRKN-205ENST00000366897 SPRYD4Q8WW59 207 aaPredicted RBP12.79□□□□□ -0.36
PRKN-205ENST00000366897 AKAP1Q92667 903 aaKnown RBP eCLIP12.79□□□□□ -0.36
PRKN-205ENST00000366897 NACC2Q96BF6 587 aa12.79□□□□□ -0.36
PRKN-205ENST00000366897 TM4SF18Q96CE8 201 aa12.79□□□□□ -0.36
PRKN-205ENST00000366897 ZG16BQ96DA0 208 aa12.79□□□□□ -0.36
PRKN-205ENST00000366897 SOSTQ9BQB4 213 aa12.79□□□□□ -0.36
PRKN-205ENST00000366897 BACE2Q9Y5Z0 518 aa12.79□□□□□ -0.36
PRKN-205ENST00000366897 CDH10Q9Y6N8 788 aa12.79□□□□□ -0.36
PRKN-205ENST00000366897 PRODHO43272 600 aa12.78□□□□□ -0.36
PRKN-205ENST00000366897 TMPRSS11DO60235 418 aa12.78□□□□□ -0.36
PRKN-205ENST00000366897 LZTS3O60299 673 aaPredicted RBP12.78□□□□□ -0.36
PRKN-205ENST00000366897 SRPRAP08240 638 aaKnown RBP12.78□□□□□ -0.36
PRKN-205ENST00000366897 ZNF250P15622 560 aa12.78□□□□□ -0.36
PRKN-205ENST00000366897 SSTR2P30874 369 aa12.78□□□□□ -0.36
PRKN-205ENST00000366897 SMSP52788 366 aa12.78□□□□□ -0.36
PRKN-205ENST00000366897 CDH11P55287 796 aa12.78□□□□□ -0.36
PRKN-205ENST00000366897 POLR2LP62875 67 aaKnown RBP12.78□□□□□ -0.36
PRKN-205ENST00000366897 CDK5Q00535 292 aa12.78□□□□□ -0.36
PRKN-205ENST00000366897 POU4F3Q15319 338 aa12.78□□□□□ -0.36
PRKN-205ENST00000366897 TMEM215Q68D42 235 aa12.78□□□□□ -0.36
PRKN-205ENST00000366897 PRICKLE2Q7Z3G6 844 aa12.78□□□□□ -0.36
PRKN-205ENST00000366897 MORN4Q8NDC4 146 aa12.78□□□□□ -0.36
PRKN-205ENST00000366897 OR11H4Q8NGC9 324 aa12.78□□□□□ -0.36
PRKN-205ENST00000366897 OR9A1PQ8NGU1 263 aa12.78□□□□□ -0.36
PRKN-205ENST00000366897 FGF11Q92914 225 aa12.78□□□□□ -0.36
PRKN-205ENST00000366897 BADQ92934 168 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms