RNA–Protein interactions for RNA: ENST00000366814.3

H3F3A-202, Transcript of H3 histone family member 3A, humanhuman

TSL 2 BASIC

Gene H3F3A, Length 1,863 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-202ENST00000366814 B4DGG1 531 aa10.21□□□□□ -0.77
H3F3A-202ENST00000366814 H0YGG7 62 aa10.21□□□□□ -0.77
H3F3A-202ENST00000366814 CASC3O15234 703 aaKnown RBP10.21□□□□□ -0.77
H3F3A-202ENST00000366814 P2RX6O15547 441 aa10.21□□□□□ -0.77
H3F3A-202ENST00000366814 MRPS14O60783 128 aaKnown RBP10.21□□□□□ -0.77
H3F3A-202ENST00000366814 OXSR1O95747 527 aaPredicted RBP10.21□□□□□ -0.77
H3F3A-202ENST00000366814 ALPPL2P10696 532 aa10.21□□□□□ -0.77
H3F3A-202ENST00000366814 JUNBP17275 347 aaPredicted RBP10.21□□□□□ -0.77
H3F3A-202ENST00000366814 POLR2IP36954 125 aaKnown RBP10.21□□□□□ -0.77
H3F3A-202ENST00000366814 MC3RP41968 323 aa10.21□□□□□ -0.77
H3F3A-202ENST00000366814 XKP51811 444 aa10.21□□□□□ -0.77
H3F3A-202ENST00000366814 LIM2P55344 173 aa10.21□□□□□ -0.77
H3F3A-202ENST00000366814 ARF3P61204 181 aaPredicted RBP10.21□□□□□ -0.77
H3F3A-202ENST00000366814 RPP38P78345 283 aaKnown RBP10.21□□□□□ -0.77
H3F3A-202ENST00000366814 ROR2Q01974 943 aaKnown RBP10.21□□□□□ -0.77
H3F3A-202ENST00000366814 FOXC1Q12948 553 aa10.21□□□□□ -0.77
H3F3A-202ENST00000366814 PMS2P3Q13401 168 aa10.21□□□□□ -0.77
H3F3A-202ENST00000366814 DYNC1I2Q13409 638 aaKnown RBP10.21□□□□□ -0.77
H3F3A-202ENST00000366814 C1orf61Q13536 156 aa10.21□□□□□ -0.77
H3F3A-202ENST00000366814 GANABQ14697 944 aaKnown RBP10.21□□□□□ -0.77
H3F3A-202ENST00000366814 RAB39AQ14964 217 aa10.21□□□□□ -0.77
H3F3A-202ENST00000366814 GPR19Q15760 415 aa10.21□□□□□ -0.77
H3F3A-202ENST00000366814 CYP27C1Q4G0S4 372 aa10.21□□□□□ -0.77
H3F3A-202ENST00000366814 TSEN54Q7Z6J9 526 aaKnown RBP10.21□□□□□ -0.77
H3F3A-202ENST00000366814 ZNF605Q86T29 641 aa10.21□□□□□ -0.77
H3F3A-202ENST00000366814 P3H2Q8IVL5 708 aa10.21□□□□□ -0.77
H3F3A-202ENST00000366814 SLC5A8Q8N695 610 aa10.21□□□□□ -0.77
H3F3A-202ENST00000366814 OR9A2Q8NGT5 310 aa10.21□□□□□ -0.77
H3F3A-202ENST00000366814 MPP4Q96JB8 637 aa10.21□□□□□ -0.77
H3F3A-202ENST00000366814 HRASLS5Q96KN8 279 aa10.21□□□□□ -0.77
H3F3A-202ENST00000366814 ZNF681Q96N22 645 aa10.21□□□□□ -0.77
H3F3A-202ENST00000366814 ALPK1Q96QP1 1244 aa10.21□□□□□ -0.77
H3F3A-202ENST00000366814 LRRC61Q9BV99 259 aa10.21□□□□□ -0.77
H3F3A-202ENST00000366814 ACTRT3Q9BYD9 372 aa10.21□□□□□ -0.77
H3F3A-202ENST00000366814 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.21□□□□□ -0.77
H3F3A-202ENST00000366814 SEMA6CQ9H3T2 930 aa10.21□□□□□ -0.77
H3F3A-202ENST00000366814 SERHL2Q9H4I8 314 aa10.21□□□□□ -0.77
H3F3A-202ENST00000366814 ACER3Q9NUN7 267 aa10.21□□□□□ -0.77
H3F3A-202ENST00000366814 PCDHGB2Q9Y5G2 931 aa10.21□□□□□ -0.77
H3F3A-202ENST00000366814 ARHGEF17Q96PE2 2063 aaPredicted RBP10.21□□□□□ -0.77
H3F3A-202ENST00000366814 J3KTA2 159 aa10.21□□□□□ -0.78
H3F3A-202ENST00000366814 FLRT2O43155 660 aa10.21□□□□□ -0.78
H3F3A-202ENST00000366814 B4GAT1O43505 415 aa10.21□□□□□ -0.78
H3F3A-202ENST00000366814 SLITRK5O94991 958 aa10.21□□□□□ -0.78
H3F3A-202ENST00000366814 CELA2BP08218 269 aaPredicted RBP10.21□□□□□ -0.78
H3F3A-202ENST00000366814 CDH3P22223 829 aa10.21□□□□□ -0.78
H3F3A-202ENST00000366814 LSAMPQ13449 338 aa10.21□□□□□ -0.78
H3F3A-202ENST00000366814 MAD2L1BPQ15013 274 aaPredicted RBP10.21□□□□□ -0.78
H3F3A-202ENST00000366814 DCST1Q5T197 706 aa10.21□□□□□ -0.78
H3F3A-202ENST00000366814 DEF8Q6ZN54 512 aa10.21□□□□□ -0.78
H3F3A-202ENST00000366814 C16orf62Q7Z3J2 963 aa10.21□□□□□ -0.78
H3F3A-202ENST00000366814 ERI1Q8IV48 349 aaKnown RBP10.21□□□□□ -0.78
H3F3A-202ENST00000366814 SVOPQ8N4V2 548 aa10.21□□□□□ -0.78
H3F3A-202ENST00000366814 LINC00471Q8N535 108 aa10.21□□□□□ -0.78
H3F3A-202ENST00000366814 CSNK1A1LQ8N752 337 aa10.21□□□□□ -0.78
H3F3A-202ENST00000366814 CNIH3Q8TBE1 160 aa10.21□□□□□ -0.78
H3F3A-202ENST00000366814 ADAMTS15Q8TE58 950 aa10.21□□□□□ -0.78
H3F3A-202ENST00000366814 NR4A3Q92570 626 aa10.21□□□□□ -0.78
H3F3A-202ENST00000366814 MS4A4EQ96PG1 132 aa10.21□□□□□ -0.78
H3F3A-202ENST00000366814 ELF4Q99607 663 aaPredicted RBP10.21□□□□□ -0.78
H3F3A-202ENST00000366814 PINK1Q9BXM7 581 aa10.21□□□□□ -0.78
H3F3A-202ENST00000366814 CCDC90BQ9GZT6 254 aa10.21□□□□□ -0.78
H3F3A-202ENST00000366814 KLHL25Q9H0H3 589 aa10.21□□□□□ -0.78
H3F3A-202ENST00000366814 SYNPO2LQ9H987 977 aa10.21□□□□□ -0.78
H3F3A-202ENST00000366814 FANCEQ9HB96 536 aa10.21□□□□□ -0.78
H3F3A-202ENST00000366814 TMEM9Q9P0T7 183 aa10.21□□□□□ -0.78
H3F3A-202ENST00000366814 PTGFRNQ9P2B2 879 aa10.21□□□□□ -0.78
H3F3A-202ENST00000366814 KCND3Q9UK17 655 aa10.21□□□□□ -0.78
H3F3A-202ENST00000366814 POMT2Q9UKY4 750 aa10.21□□□□□ -0.78
H3F3A-202ENST00000366814 SLC22A7Q9Y694 548 aa10.21□□□□□ -0.78
H3F3A-202ENST00000366814 LOC105369274A0A096LPK9 316 aa10.2□□□□□ -0.78
H3F3A-202ENST00000366814 LOC102723532A0A0G2JNH3 316 aa10.2□□□□□ -0.78
H3F3A-202ENST00000366814 A0A1B0GTQ1 180 aa10.2□□□□□ -0.78
H3F3A-202ENST00000366814 PRAMEF25A6NGN4 478 aa10.2□□□□□ -0.78
H3F3A-202ENST00000366814 WASHC1A8K0Z3 465 aa10.2□□□□□ -0.78
H3F3A-202ENST00000366814 PTGES3LE9PB15 166 aa10.2□□□□□ -0.78
H3F3A-202ENST00000366814 FAAHO00519 579 aa10.2□□□□□ -0.78
H3F3A-202ENST00000366814 FAM20BO75063 409 aa10.2□□□□□ -0.78
H3F3A-202ENST00000366814 TRMUO75648 421 aaKnown RBP10.2□□□□□ -0.78
H3F3A-202ENST00000366814 UGT2B17O75795 530 aa10.2□□□□□ -0.78
H3F3A-202ENST00000366814 CSF2P04141 144 aa10.2□□□□□ -0.78
H3F3A-202ENST00000366814 H1F0P07305 194 aaKnown RBP10.2□□□□□ -0.78
H3F3A-202ENST00000366814 PVRP15151 417 aa10.2□□□□□ -0.78
H3F3A-202ENST00000366814 NME1P15531 152 aaKnown RBP10.2□□□□□ -0.78
H3F3A-202ENST00000366814 PORP16435 677 aaPredicted RBP10.2□□□□□ -0.78
H3F3A-202ENST00000366814 AGXTP21549 392 aa10.2□□□□□ -0.78
H3F3A-202ENST00000366814 IFNA8P32881 189 aa10.2□□□□□ -0.78
H3F3A-202ENST00000366814 ARRB1P49407 418 aaPredicted RBP10.2□□□□□ -0.78
H3F3A-202ENST00000366814 PPM1FP49593 454 aaPredicted RBP10.2□□□□□ -0.78
H3F3A-202ENST00000366814 MAPK10P53779 464 aa10.2□□□□□ -0.78
H3F3A-202ENST00000366814 NXPH1P58417 271 aa10.2□□□□□ -0.78
H3F3A-202ENST00000366814 ZNF750Q32MQ0 723 aa10.2□□□□□ -0.78
H3F3A-202ENST00000366814 FGD3Q5JSP0 725 aa10.2□□□□□ -0.78
H3F3A-202ENST00000366814 FRMPD2BQ6IN97 320 aa10.2□□□□□ -0.78
H3F3A-202ENST00000366814 NIPAL1Q6NVV3 410 aa10.2□□□□□ -0.78
H3F3A-202ENST00000366814 USP53Q70EK8 1073 aa10.2□□□□□ -0.78
H3F3A-202ENST00000366814 SPARTQ8N0X7 666 aa10.2□□□□□ -0.78
H3F3A-202ENST00000366814 OR4N4Q8N0Y3 316 aa10.2□□□□□ -0.78
H3F3A-202ENST00000366814 PARP8Q8N3A8 854 aa10.2□□□□□ -0.78
H3F3A-202ENST00000366814 GPR32P1Q8NGA4 272 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms