RNA–Protein interactions for RNA: ENST00000365287.1

RNU4-11P-201, Transcript of RNA, U4 small nuclear 11, pseudogene, humanhuman

BASIC

Gene RNU4-11P, Length 132 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-11P-201ENST00000365287 SOHLH2Q9NX45 425 aa0.06□□□□□ -2.4
RNU4-11P-201ENST00000365287 CPSF2Q9P2I0 782 aaKnown RBP0.06□□□□□ -2.4
RNU4-11P-201ENST00000365287 ZNF391Q9UJN7 358 aa0.06□□□□□ -2.4
RNU4-11P-201ENST00000365287 ANGPTL2Q9UKU9 493 aa0.06□□□□□ -2.4
RNU4-11P-201ENST00000365287 TP53TG5Q9Y2B4 290 aa0.06□□□□□ -2.4
RNU4-11P-201ENST00000365287 COL11A1P12107 1806 aaPredicted RBP0.06□□□□□ -2.4
RNU4-11P-201ENST00000365287 PRRC2BQ5JSZ5 2229 aaKnown RBP0.05□□□□□ -2.4
RNU4-11P-201ENST00000365287 IGKV2-24A0A0C4DH68 120 aa0.05□□□□□ -2.4
RNU4-11P-201ENST00000365287 GJE1A6NN92 205 aa0.05□□□□□ -2.4
RNU4-11P-201ENST00000365287 DHRS7CA6NNS2 312 aa0.05□□□□□ -2.4
RNU4-11P-201ENST00000365287 MEI4A8MW99 385 aa0.05□□□□□ -2.4
RNU4-11P-201ENST00000365287 J3QRE1 110 aa0.05□□□□□ -2.4
RNU4-11P-201ENST00000365287 ACSL4O60488 711 aa0.05□□□□□ -2.4
RNU4-11P-201ENST00000365287 CSF2P04141 144 aa0.05□□□□□ -2.4
RNU4-11P-201ENST00000365287 CSH1P0DML2 217 aa0.05□□□□□ -2.4
RNU4-11P-201ENST00000365287 CSH2P0DML3 217 aa0.05□□□□□ -2.4
RNU4-11P-201ENST00000365287 PSMA3P25788 255 aa0.05□□□□□ -2.4
RNU4-11P-201ENST00000365287 GDI1P31150 447 aa0.05□□□□□ -2.4
RNU4-11P-201ENST00000365287 NF2P35240 595 aa0.05□□□□□ -2.4
RNU4-11P-201ENST00000365287 METAP1P53582 386 aa0.05□□□□□ -2.4
RNU4-11P-201ENST00000365287 NOP14P78316 857 aaKnown RBP0.05□□□□□ -2.4
RNU4-11P-201ENST00000365287 PUDPQ08623 228 aa0.05□□□□□ -2.4
RNU4-11P-201ENST00000365287 IL18R1Q13478 541 aa0.05□□□□□ -2.4
RNU4-11P-201ENST00000365287 P2RY14Q15391 338 aa0.05□□□□□ -2.4
RNU4-11P-201ENST00000365287 COX19Q49B96 90 aa0.05□□□□□ -2.4
RNU4-11P-201ENST00000365287 LGSNQ5TDP6 509 aa0.05□□□□□ -2.4
RNU4-11P-201ENST00000365287 CYP4V2Q6ZWL3 525 aaPredicted RBP0.05□□□□□ -2.4
RNU4-11P-201ENST00000365287 NAA40Q86UY6 237 aa0.05□□□□□ -2.4
RNU4-11P-201ENST00000365287 C12orf56Q8IXR9 622 aa0.05□□□□□ -2.4
RNU4-11P-201ENST00000365287 SMYD1Q8NB12 490 aa0.05□□□□□ -2.4
RNU4-11P-201ENST00000365287 CCDC197Q8NCU1 140 aa0.05□□□□□ -2.4
RNU4-11P-201ENST00000365287 OR9A1PQ8NGU1 263 aa0.05□□□□□ -2.4
RNU4-11P-201ENST00000365287 EXT2Q93063 718 aa0.05□□□□□ -2.4
RNU4-11P-201ENST00000365287 C5orf30Q96GV9 206 aa0.05□□□□□ -2.4
RNU4-11P-201ENST00000365287 LINC00615Q96LM1 132 aaPredicted RBP0.05□□□□□ -2.4
RNU4-11P-201ENST00000365287 SPAG8Q99932 426 aaPredicted RBP0.05□□□□□ -2.4
RNU4-11P-201ENST00000365287 TM2D1Q9BX74 207 aa0.05□□□□□ -2.4
RNU4-11P-201ENST00000365287 GPR174Q9BXC1 333 aa0.05□□□□□ -2.4
RNU4-11P-201ENST00000365287 NUSAP1Q9BXS6 441 aaKnown RBP0.05□□□□□ -2.4
RNU4-11P-201ENST00000365287 ZDHHC11Q9H8X9 412 aa0.05□□□□□ -2.4
RNU4-11P-201ENST00000365287 SH2D2AQ9NP31 389 aa0.05□□□□□ -2.4
RNU4-11P-201ENST00000365287 EXD2Q9NVH0 621 aa0.05□□□□□ -2.4
RNU4-11P-201ENST00000365287 PLEK2Q9NYT0 353 aa0.05□□□□□ -2.4
RNU4-11P-201ENST00000365287 C6orf203Q9P0P8 240 aaPredicted RBP0.05□□□□□ -2.4
RNU4-11P-201ENST00000365287 NUFIP1Q9UHK0 495 aaKnown RBP0.05□□□□□ -2.4
RNU4-11P-201ENST00000365287 EMCNQ9ULC0 261 aa0.05□□□□□ -2.4
RNU4-11P-201ENST00000365287 ITM2BQ9Y287 266 aa0.05□□□□□ -2.4
RNU4-11P-201ENST00000365287 FBN2P35556 2912 aa0.05□□□□□ -2.4
RNU4-11P-201ENST00000365287 COL5A3P25940 1745 aaPredicted RBP0.04□□□□□ -2.4
RNU4-11P-201ENST00000365287 DOCK9Q9BZ29 2069 aa0.04□□□□□ -2.4
RNU4-11P-201ENST00000365287 A0A0A6YYD4 124 aa0.04□□□□□ -2.4
RNU4-11P-201ENST00000365287 C7orf66A4D0T2 115 aa0.04□□□□□ -2.4
RNU4-11P-201ENST00000365287 RBMY1BA6NDE4 496 aaKnown RBP0.04□□□□□ -2.4
RNU4-11P-201ENST00000365287 RBMY1EA6NEQ0 496 aaKnown RBP0.04□□□□□ -2.4
RNU4-11P-201ENST00000365287 C11orf94C9JXX5 98 aa0.04□□□□□ -2.4
RNU4-11P-201ENST00000365287 TSPAN2O60636 221 aa0.04□□□□□ -2.4
RNU4-11P-201ENST00000365287 SLITRK3O94933 977 aa0.04□□□□□ -2.4
RNU4-11P-201ENST00000365287 IGHV3-48P01763 117 aa0.04□□□□□ -2.4
RNU4-11P-201ENST00000365287 GLAP06280 429 aa0.04□□□□□ -2.4
RNU4-11P-201ENST00000365287 RBMY1DP0C7P1 496 aaKnown RBP0.04□□□□□ -2.4
RNU4-11P-201ENST00000365287 PRDX3P30048 256 aaKnown RBP0.04□□□□□ -2.4
RNU4-11P-201ENST00000365287 HOXA9P31269 272 aa0.04□□□□□ -2.4
RNU4-11P-201ENST00000365287 EIF2DP41214 584 aaKnown RBP0.04□□□□□ -2.4
RNU4-11P-201ENST00000365287 BTDP43251 543 aa0.04□□□□□ -2.4
RNU4-11P-201ENST00000365287 MAGEB1P43366 347 aa0.04□□□□□ -2.4
RNU4-11P-201ENST00000365287 NSFP46459 744 aaKnown RBP0.04□□□□□ -2.4
RNU4-11P-201ENST00000365287 RAG2P55895 527 aa0.04□□□□□ -2.4
RNU4-11P-201ENST00000365287 ZNF85Q03923 595 aa0.04□□□□□ -2.4
RNU4-11P-201ENST00000365287 CHAF1BQ13112 559 aa0.04□□□□□ -2.4
RNU4-11P-201ENST00000365287 ALCAMQ13740 583 aa0.04□□□□□ -2.4
RNU4-11P-201ENST00000365287 PSMD6Q15008 389 aa0.04□□□□□ -2.4
RNU4-11P-201ENST00000365287 IRF4Q15306 451 aa0.04□□□□□ -2.4
RNU4-11P-201ENST00000365287 CDKN3Q16667 212 aa0.04□□□□□ -2.4
RNU4-11P-201ENST00000365287 LRRC36Q1X8D7 754 aa0.04□□□□□ -2.4
RNU4-11P-201ENST00000365287 MEDAGQ5VYS4 303 aa0.04□□□□□ -2.4
RNU4-11P-201ENST00000365287 NANOGP8Q6NSW7 305 aa0.04□□□□□ -2.4
RNU4-11P-201ENST00000365287 SHISA6Q6ZSJ9 500 aa0.04□□□□□ -2.4
RNU4-11P-201ENST00000365287 ITIH5Q86UX2 942 aa0.04□□□□□ -2.4
RNU4-11P-201ENST00000365287 MEX3DQ86XN8 651 aaKnown RBP0.04□□□□□ -2.4
RNU4-11P-201ENST00000365287 WDR49Q8IV35 697 aa0.04□□□□□ -2.4
RNU4-11P-201ENST00000365287 TAGAPQ8N103 731 aa0.04□□□□□ -2.4
RNU4-11P-201ENST00000365287 DNAJA4Q8WW22 397 aaPredicted RBP0.04□□□□□ -2.4
RNU4-11P-201ENST00000365287 C18orf25Q96B23 403 aaPredicted RBP0.04□□□□□ -2.4
RNU4-11P-201ENST00000365287 RMDN2Q96LZ7 410 aa0.04□□□□□ -2.4
RNU4-11P-201ENST00000365287 GCNAQ96QF7 691 aa0.04□□□□□ -2.4
RNU4-11P-201ENST00000365287 OR2M2Q96R28 347 aa0.04□□□□□ -2.4
RNU4-11P-201ENST00000365287 COQ7Q99807 217 aa0.04□□□□□ -2.4
RNU4-11P-201ENST00000365287 LZTS2Q9BRK4 669 aa0.04□□□□□ -2.4
RNU4-11P-201ENST00000365287 CXXC4Q9H2H0 198 aa0.04□□□□□ -2.4
RNU4-11P-201ENST00000365287 MINDY3Q9H8M7 445 aa0.04□□□□□ -2.4
RNU4-11P-201ENST00000365287 TMED7Q9Y3B3 224 aa0.04□□□□□ -2.4
RNU4-11P-201ENST00000365287 BAHCC1Q9P281 2608 aa0.04□□□□□ -2.4
RNU4-11P-201ENST00000365287 MROH7-TTC4A0A0A0MT08 1334 aa0.04□□□□□ -2.4
RNU4-11P-201ENST00000365287 A0A1B0GW55 424 aa0.03□□□□□ -2.4
RNU4-11P-201ENST00000365287 ATP6AP2A0A1C7CYW4 349 aa0.03□□□□□ -2.4
RNU4-11P-201ENST00000365287 hCG_1809904A0A1W2PP81 198 aa0.03□□□□□ -2.4
RNU4-11P-201ENST00000365287 A0A1W2PPE2 198 aa0.03□□□□□ -2.4
RNU4-11P-201ENST00000365287 A0A1W2PR64 198 aa0.03□□□□□ -2.4
RNU4-11P-201ENST00000365287 TRBC2A0A5B9 178 aa0.03□□□□□ -2.4
RNU4-11P-201ENST00000365287 GTPBP10A4D1E9 387 aaKnown RBP0.03□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms