RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 SLC22A16Q86VW1 577 aa3.02□□□□□ -1.93
RNU4-28P-201ENST00000364739 TGIF2LYQ8IUE0 185 aa3.02□□□□□ -1.93
RNU4-28P-201ENST00000364739 SFRP1Q8N474 314 aa3.02□□□□□ -1.93
RNU4-28P-201ENST00000364739 TMCO5AQ8N6Q1 288 aa3.02□□□□□ -1.93
RNU4-28P-201ENST00000364739 NKAIN3Q8N8D7 197 aa3.02□□□□□ -1.93
RNU4-28P-201ENST00000364739 LPCAT1Q8NF37 534 aa3.02□□□□□ -1.93
RNU4-28P-201ENST00000364739 SLC25A38Q96DW6 304 aa3.02□□□□□ -1.93
RNU4-28P-201ENST00000364739 DEFB118Q96PH6 123 aa3.02□□□□□ -1.93
RNU4-28P-201ENST00000364739 KIR2DL4Q99706 377 aa3.02□□□□□ -1.93
RNU4-28P-201ENST00000364739 HCAR1Q9BXC0 346 aa3.02□□□□□ -1.93
RNU4-28P-201ENST00000364739 ELOVL4Q9GZR5 314 aa3.02□□□□□ -1.93
RNU4-28P-201ENST00000364739 ALG9Q9H6U8 611 aa3.02□□□□□ -1.93
RNU4-28P-201ENST00000364739 IL1RAPL2Q9NP60 686 aa3.02□□□□□ -1.93
RNU4-28P-201ENST00000364739 GTF3C1Q12789 2109 aa3.02□□□□□ -1.93
RNU4-28P-201ENST00000364739 CCDC69A6NI79 296 aa3.01□□□□□ -1.93
RNU4-28P-201ENST00000364739 SLC17A2O00624 439 aa3.01□□□□□ -1.93
RNU4-28P-201ENST00000364739 NPY2RP49146 381 aa3.01□□□□□ -1.93
RNU4-28P-201ENST00000364739 DIO3P55073 304 aa3.01□□□□□ -1.93
RNU4-28P-201ENST00000364739 OVGP1Q12889 678 aa3.01□□□□□ -1.93
RNU4-28P-201ENST00000364739 CMPK2Q5EBM0 449 aa3.01□□□□□ -1.93
RNU4-28P-201ENST00000364739 B3GLCTQ6Y288 498 aa3.01□□□□□ -1.93
RNU4-28P-201ENST00000364739 BNIPLQ7Z465 357 aa3.01□□□□□ -1.93
RNU4-28P-201ENST00000364739 FNDC8Q8TC99 324 aa3.01□□□□□ -1.93
RNU4-28P-201ENST00000364739 SLCO4A1Q96BD0 722 aa3.01□□□□□ -1.93
RNU4-28P-201ENST00000364739 FAM122AQ96E09 287 aa3.01□□□□□ -1.93
RNU4-28P-201ENST00000364739 TSSK1BQ9BXA7 367 aa3.01□□□□□ -1.93
RNU4-28P-201ENST00000364739 ZNF702PQ9H963 129 aa3.01□□□□□ -1.93
RNU4-28P-201ENST00000364739 AKAP7Q9P0M2 348 aaPredicted RBP3.01□□□□□ -1.93
RNU4-28P-201ENST00000364739 DPM3Q9P2X0 92 aa3.01□□□□□ -1.93
RNU4-28P-201ENST00000364739 APOBEC3BQ9UH17 382 aaKnown RBP3.01□□□□□ -1.93
RNU4-28P-201ENST00000364739 ENTPD4Q9Y227 616 aa3.01□□□□□ -1.93
RNU4-28P-201ENST00000364739 MRPS2Q9Y399 296 aaKnown RBP3.01□□□□□ -1.93
RNU4-28P-201ENST00000364739 ZNF175Q9Y473 711 aa3.01□□□□□ -1.93
RNU4-28P-201ENST00000364739 NPC1L1Q9UHC9 1359 aa3□□□□□ -1.93
RNU4-28P-201ENST00000364739 NPIPA5A0A0B4J1W7 369 aa3□□□□□ -1.93
RNU4-28P-201ENST00000364739 A0A1W2PRQ8 180 aa3□□□□□ -1.93
RNU4-28P-201ENST00000364739 A0A1W2PRV1 198 aa3□□□□□ -1.93
RNU4-28P-201ENST00000364739 NPIPA5E9PKD4 350 aa3□□□□□ -1.93
RNU4-28P-201ENST00000364739 HIST1H2AGP0C0S8 130 aaPredicted RBP3□□□□□ -1.93
RNU4-28P-201ENST00000364739 MUTP22033 750 aa3□□□□□ -1.93
RNU4-28P-201ENST00000364739 IGFBP5P24593 272 aa3□□□□□ -1.93
RNU4-28P-201ENST00000364739 PTBP1P26599 531 aaKnown RBP eCLIP3□□□□□ -1.93
RNU4-28P-201ENST00000364739 NSFP46459 744 aaKnown RBP3□□□□□ -1.93
RNU4-28P-201ENST00000364739 NT5C2P49902 561 aa3□□□□□ -1.93
RNU4-28P-201ENST00000364739 ZNF133P52736 654 aaPredicted RBP3□□□□□ -1.93
RNU4-28P-201ENST00000364739 KIAA1024LP59773 190 aa3□□□□□ -1.93
RNU4-28P-201ENST00000364739 GNB2P62879 340 aa3□□□□□ -1.93
RNU4-28P-201ENST00000364739 GALK2Q01415 458 aa3□□□□□ -1.93
RNU4-28P-201ENST00000364739 IL18R1Q13478 541 aa3□□□□□ -1.93
RNU4-28P-201ENST00000364739 SHROOM1Q2M3G4 852 aaPredicted RBP3□□□□□ -1.93
RNU4-28P-201ENST00000364739 SMU1Q2TAY7 513 aa3□□□□□ -1.93
RNU4-28P-201ENST00000364739 DCAF4L1Q3SXM0 396 aa3□□□□□ -1.93
RNU4-28P-201ENST00000364739 GLYR1Q49A26 553 aaPredicted RBP3□□□□□ -1.93
RNU4-28P-201ENST00000364739 PAGE2BQ5JRK9 111 aa3□□□□□ -1.93
RNU4-28P-201ENST00000364739 LCE1CQ5T751 118 aa3□□□□□ -1.93
RNU4-28P-201ENST00000364739 LCE1BQ5T7P3 118 aa3□□□□□ -1.93
RNU4-28P-201ENST00000364739 PRAMEF7Q5VXH5 474 aa3□□□□□ -1.93
RNU4-28P-201ENST00000364739 HIST2H2AA3Q6FI13 130 aa3□□□□□ -1.93
RNU4-28P-201ENST00000364739 HIST2H2ABQ8IUE6 130 aaPredicted RBP3□□□□□ -1.93
RNU4-28P-201ENST00000364739 CCDC170Q8IYT3 715 aa3□□□□□ -1.93
RNU4-28P-201ENST00000364739 MCOLN2Q8IZK6 566 aa3□□□□□ -1.93
RNU4-28P-201ENST00000364739 HIST1H2ACQ93077 130 aa3□□□□□ -1.93
RNU4-28P-201ENST00000364739 C5orf30Q96GV9 206 aa3□□□□□ -1.93
RNU4-28P-201ENST00000364739 COPS7AQ9UBW8 275 aa3□□□□□ -1.93
RNU4-28P-201ENST00000364739 CCPG1Q9ULG6 757 aa3□□□□□ -1.93
RNU4-28P-201ENST00000364739 RAD54L2Q9Y4B4 1467 aa3□□□□□ -1.93
RNU4-28P-201ENST00000364739 CHEK1O14757 476 aa2.99□□□□□ -1.93
RNU4-28P-201ENST00000364739 CFLARO15519 480 aa2.99□□□□□ -1.93
RNU4-28P-201ENST00000364739 FMO6PO60774 539 aa2.99□□□□□ -1.93
RNU4-28P-201ENST00000364739 PROS1P07225 676 aa2.99□□□□□ -1.93
RNU4-28P-201ENST00000364739 HMOX1P09601 288 aa2.99□□□□□ -1.93
RNU4-28P-201ENST00000364739 IGHV1-2P23083 117 aa2.99□□□□□ -1.93
RNU4-28P-201ENST00000364739 ACVR1BP36896 505 aa2.99□□□□□ -1.93
RNU4-28P-201ENST00000364739 SMC1AQ14683 1233 aaKnown RBP2.99□□□□□ -1.93
RNU4-28P-201ENST00000364739 ZNF674Q2M3X9 581 aa2.99□□□□□ -1.93
RNU4-28P-201ENST00000364739 SBK1Q52WX2 424 aa2.99□□□□□ -1.93
RNU4-28P-201ENST00000364739 IYDQ6PHW0 289 aa2.99□□□□□ -1.93
RNU4-28P-201ENST00000364739 TSEN54Q7Z6J9 526 aaKnown RBP2.99□□□□□ -1.93
RNU4-28P-201ENST00000364739 ADGRD2Q7Z7M1 963 aa2.99□□□□□ -1.93
RNU4-28P-201ENST00000364739 ERICH1Q86X53 443 aa2.99□□□□□ -1.93
RNU4-28P-201ENST00000364739 C14orf178Q8N769 122 aaPredicted RBP2.99□□□□□ -1.93
RNU4-28P-201ENST00000364739 RNF138Q8WVD3 245 aa2.99□□□□□ -1.93
RNU4-28P-201ENST00000364739 TMEM37Q8WXS4 190 aa2.99□□□□□ -1.93
RNU4-28P-201ENST00000364739 PTP4A1Q93096 173 aa2.99□□□□□ -1.93
RNU4-28P-201ENST00000364739 C11orf24Q96F05 449 aaPredicted RBP2.99□□□□□ -1.93
RNU4-28P-201ENST00000364739 TM2D1Q9BX74 207 aa2.99□□□□□ -1.93
RNU4-28P-201ENST00000364739 HES7Q9BYE0 225 aa2.99□□□□□ -1.93
RNU4-28P-201ENST00000364739 KCNMB3Q9NPA1 279 aa2.99□□□□□ -1.93
RNU4-28P-201ENST00000364739 MEPEQ9NQ76 525 aaPredicted RBP2.99□□□□□ -1.93
RNU4-28P-201ENST00000364739 PIGVQ9NUD9 493 aa2.99□□□□□ -1.93
RNU4-28P-201ENST00000364739 NACAE9PAV3 2078 aa2.99□□□□□ -1.93
RNU4-28P-201ENST00000364739 H3BMH7 237 aa2.98□□□□□ -1.93
RNU4-28P-201ENST00000364739 PDLIM1O00151 329 aa2.98□□□□□ -1.93
RNU4-28P-201ENST00000364739 TLR4O00206 839 aa2.98□□□□□ -1.93
RNU4-28P-201ENST00000364739 LATO43561 262 aa2.98□□□□□ -1.93
RNU4-28P-201ENST00000364739 IGSF6O95976 241 aa2.98□□□□□ -1.93
RNU4-28P-201ENST00000364739 SERPINF2P08697 491 aa2.98□□□□□ -1.93
RNU4-28P-201ENST00000364739 CYP11B1P15538 503 aa2.98□□□□□ -1.93
RNU4-28P-201ENST00000364739 PSMB1P20618 241 aaKnown RBP2.98□□□□□ -1.93
RNU4-28P-201ENST00000364739 SGSHP51688 502 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms