RNA–Protein interactions for RNA: ENST00000364007.1

RNU6-560P-201, Transcript of RNA, U6 small nuclear 560, pseudogene, humanhuman

BASIC

Gene RNU6-560P, Length 108 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-560P-201ENST00000364007 RFC2P35250 354 aa3.23□□□□□ -1.89
RNU6-560P-201ENST00000364007 NME3Q13232 169 aa3.23□□□□□ -1.89
RNU6-560P-201ENST00000364007 PPP1R3AQ16821 1122 aa3.23□□□□□ -1.89
RNU6-560P-201ENST00000364007 ZSWIM7Q19AV6 140 aa3.23□□□□□ -1.89
RNU6-560P-201ENST00000364007 TATDN1Q6P1N9 297 aa3.23□□□□□ -1.89
RNU6-560P-201ENST00000364007 FAM159AQ6UWV7 190 aa3.23□□□□□ -1.89
RNU6-560P-201ENST00000364007 STOX1Q6ZVD7 989 aa3.23□□□□□ -1.89
RNU6-560P-201ENST00000364007 SERINC5Q86VE9 423 aa3.23□□□□□ -1.89
RNU6-560P-201ENST00000364007 GPBP1Q86WP2 473 aa3.23□□□□□ -1.89
RNU6-560P-201ENST00000364007 ELMOD2Q8IZ81 293 aa3.23□□□□□ -1.89
RNU6-560P-201ENST00000364007 ZPLD1Q8TCW7 415 aa3.23□□□□□ -1.89
RNU6-560P-201ENST00000364007 SPXQ9BT56 116 aa3.23□□□□□ -1.89
RNU6-560P-201ENST00000364007 TRIM9Q9C026 710 aa3.23□□□□□ -1.89
RNU6-560P-201ENST00000364007 RAI14Q9P0K7 980 aa3.23□□□□□ -1.89
RNU6-560P-201ENST00000364007 MBD2Q9UBB5 411 aa3.23□□□□□ -1.89
RNU6-560P-201ENST00000364007 PURGQ9UJV8 347 aaKnown RBP3.23□□□□□ -1.89
RNU6-560P-201ENST00000364007 FKBP7Q9Y680 259 aa3.23□□□□□ -1.89
RNU6-560P-201ENST00000364007 IMPA2O14732 288 aa3.22□□□□□ -1.89
RNU6-560P-201ENST00000364007 TSC22D2O75157 780 aa3.22□□□□□ -1.89
RNU6-560P-201ENST00000364007 IGSF6O95976 241 aa3.22□□□□□ -1.89
RNU6-560P-201ENST00000364007 MT-ATP6P00846 226 aa3.22□□□□□ -1.89
RNU6-560P-201ENST00000364007 PVRP15151 417 aa3.22□□□□□ -1.89
RNU6-560P-201ENST00000364007 MAGEA4P43358 317 aa3.22□□□□□ -1.89
RNU6-560P-201ENST00000364007 RABIFP47224 123 aa3.22□□□□□ -1.89
RNU6-560P-201ENST00000364007 RPL34P49207 117 aaKnown RBP3.22□□□□□ -1.89
RNU6-560P-201ENST00000364007 MYBPC1Q00872 1141 aa3.22□□□□□ -1.89
RNU6-560P-201ENST00000364007 PAX2Q02962 417 aa3.22□□□□□ -1.89
RNU6-560P-201ENST00000364007 SLC10A1Q14973 349 aa3.22□□□□□ -1.89
RNU6-560P-201ENST00000364007 LRIT3Q3SXY7 679 aa3.22□□□□□ -1.89
RNU6-560P-201ENST00000364007 IL23RQ5VWK5 629 aa3.22□□□□□ -1.89
RNU6-560P-201ENST00000364007 PRR5LQ6MZQ0 368 aa3.22□□□□□ -1.89
RNU6-560P-201ENST00000364007 PNCKQ6P2M8 343 aa3.22□□□□□ -1.89
RNU6-560P-201ENST00000364007 NEK5Q6P3R8 708 aa3.22□□□□□ -1.89
RNU6-560P-201ENST00000364007 RANBP3LQ86VV4 465 aaPredicted RBP3.22□□□□□ -1.89
RNU6-560P-201ENST00000364007 FBXL16Q8N461 479 aa3.22□□□□□ -1.89
RNU6-560P-201ENST00000364007 CD177Q8N6Q3 437 aa3.22□□□□□ -1.89
RNU6-560P-201ENST00000364007 WDR36Q8NI36 951 aaKnown RBP3.22□□□□□ -1.89
RNU6-560P-201ENST00000364007 CCDC47Q96A33 483 aaKnown RBP3.22□□□□□ -1.89
RNU6-560P-201ENST00000364007 DNAJA3Q96EY1 480 aa3.22□□□□□ -1.89
RNU6-560P-201ENST00000364007 CCT8L2Q96SF2 557 aa3.22□□□□□ -1.89
RNU6-560P-201ENST00000364007 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.22□□□□□ -1.89
RNU6-560P-201ENST00000364007 FAM114A2Q9NRY5 505 aa3.22□□□□□ -1.89
RNU6-560P-201ENST00000364007 NINJ2Q9NZG7 142 aa3.22□□□□□ -1.89
RNU6-560P-201ENST00000364007 RSPH14Q9UHP6 348 aa3.22□□□□□ -1.89
RNU6-560P-201ENST00000364007 FZR1Q9UM11 496 aa3.22□□□□□ -1.89
RNU6-560P-201ENST00000364007 RNF115Q9Y4L5 304 aa3.22□□□□□ -1.89
RNU6-560P-201ENST00000364007 IGLV3-10A0A075B6K4 115 aa3.21□□□□□ -1.9
RNU6-560P-201ENST00000364007 MFSD2BA6NFX1 497 aa3.21□□□□□ -1.9
RNU6-560P-201ENST00000364007 PDLIM1O00151 329 aa3.21□□□□□ -1.9
RNU6-560P-201ENST00000364007 BUB1O43683 1085 aa3.21□□□□□ -1.9
RNU6-560P-201ENST00000364007 SEC22BO75396 215 aa3.21□□□□□ -1.9
RNU6-560P-201ENST00000364007 TOXO94900 526 aa3.21□□□□□ -1.9
RNU6-560P-201ENST00000364007 PRAMEF12O95522 483 aa3.21□□□□□ -1.9
RNU6-560P-201ENST00000364007 TGFAP01135 160 aa3.21□□□□□ -1.9
RNU6-560P-201ENST00000364007 SNRPCP09234 159 aaKnown RBP3.21□□□□□ -1.9
RNU6-560P-201ENST00000364007 ALPIP09923 528 aa3.21□□□□□ -1.9
RNU6-560P-201ENST00000364007 RPA1P27694 616 aa3.21□□□□□ -1.9
RNU6-560P-201ENST00000364007 PRDX2P32119 198 aa3.21□□□□□ -1.9
RNU6-560P-201ENST00000364007 NOP14P78316 857 aaKnown RBP3.21□□□□□ -1.9
RNU6-560P-201ENST00000364007 FUT7Q11130 342 aa3.21□□□□□ -1.9
RNU6-560P-201ENST00000364007 BNIP1Q12981 228 aa3.21□□□□□ -1.9
RNU6-560P-201ENST00000364007 GAMTQ14353 236 aa3.21□□□□□ -1.9
RNU6-560P-201ENST00000364007 SMC1AQ14683 1233 aaKnown RBP3.21□□□□□ -1.9
RNU6-560P-201ENST00000364007 ZIC1Q15915 447 aa3.21□□□□□ -1.9
RNU6-560P-201ENST00000364007 ACSF3Q4G176 576 aaPredicted RBP3.21□□□□□ -1.9
RNU6-560P-201ENST00000364007 GOLGA7Q7Z5G4 137 aa3.21□□□□□ -1.9
RNU6-560P-201ENST00000364007 ADCK1Q86TW2 530 aa3.21□□□□□ -1.9
RNU6-560P-201ENST00000364007 HSCBQ8IWL3 235 aa3.21□□□□□ -1.9
RNU6-560P-201ENST00000364007 CENPSQ8N2Z9 138 aa3.21□□□□□ -1.9
RNU6-560P-201ENST00000364007 ARFGAP2Q8N6H7 521 aa3.21□□□□□ -1.9
RNU6-560P-201ENST00000364007 RFESDQ8TAC1 157 aa3.21□□□□□ -1.9
RNU6-560P-201ENST00000364007 GTSF1Q8WW33 167 aa3.21□□□□□ -1.9
RNU6-560P-201ENST00000364007 TIGARQ9NQ88 270 aa3.21□□□□□ -1.9
RNU6-560P-201ENST00000364007 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP3.21□□□□□ -1.9
RNU6-560P-201ENST00000364007 ABCD2Q9UBJ2 740 aa3.21□□□□□ -1.9
RNU6-560P-201ENST00000364007 Q9UF83 564 aa3.21□□□□□ -1.9
RNU6-560P-201ENST00000364007 PLA2G4CQ9UP65 541 aa3.21□□□□□ -1.9
RNU6-560P-201ENST00000364007 UBE4BO95155 1302 aa3.2□□□□□ -1.9
RNU6-560P-201ENST00000364007 ZNF318Q5VUA4 2279 aa3.2□□□□□ -1.9
RNU6-560P-201ENST00000364007 LRIT2A6NDA9 550 aa3.2□□□□□ -1.9
RNU6-560P-201ENST00000364007 EFCAB7A8K855 629 aa3.2□□□□□ -1.9
RNU6-560P-201ENST00000364007 C11orf98E9PRG8 122 aa3.2□□□□□ -1.9
RNU6-560P-201ENST00000364007 GIG44P09565 113 aaPredicted RBP3.2□□□□□ -1.9
RNU6-560P-201ENST00000364007 SLC35E2P0CK97 266 aa3.2□□□□□ -1.9
RNU6-560P-201ENST00000364007 GHRP10912 638 aa3.2□□□□□ -1.9
RNU6-560P-201ENST00000364007 LAMP1P11279 417 aa3.2□□□□□ -1.9
RNU6-560P-201ENST00000364007 PGAM2P15259 253 aa3.2□□□□□ -1.9
RNU6-560P-201ENST00000364007 GAP43P17677 238 aa3.2□□□□□ -1.9
RNU6-560P-201ENST00000364007 FASP25445 335 aa3.2□□□□□ -1.9
RNU6-560P-201ENST00000364007 ARHGDIBP52566 201 aa3.2□□□□□ -1.9
RNU6-560P-201ENST00000364007 ATXN3P54252 364 aaPredicted RBP3.2□□□□□ -1.9
RNU6-560P-201ENST00000364007 SLC26A5P58743 744 aa3.2□□□□□ -1.9
RNU6-560P-201ENST00000364007 GABPB1Q06547 395 aaPredicted RBP3.2□□□□□ -1.9
RNU6-560P-201ENST00000364007 KARSQ15046 597 aaKnown RBP3.2□□□□□ -1.9
RNU6-560P-201ENST00000364007 PKN2Q16513 984 aaKnown RBP3.2□□□□□ -1.9
RNU6-560P-201ENST00000364007 MICAQ29983 383 aa3.2□□□□□ -1.9
RNU6-560P-201ENST00000364007 PARP6Q2NL67 630 aa3.2□□□□□ -1.9
RNU6-560P-201ENST00000364007 LDLRAP1Q5SW96 308 aa3.2□□□□□ -1.9
RNU6-560P-201ENST00000364007 MARC1Q5VT66 337 aa3.2□□□□□ -1.9
RNU6-560P-201ENST00000364007 CGB2Q6NT52 195 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms