RNA–Protein interactions for RNA: ENST00000361716.7

VAMP1-201, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 3,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-201ENST00000361716 OSMP13725 252 aa12.01□□□□□ -0.49
VAMP1-201ENST00000361716 CAPZA2P47755 286 aa12.01□□□□□ -0.49
VAMP1-201ENST00000361716 PTSQ03393 145 aa12.01□□□□□ -0.49
VAMP1-201ENST00000361716 DOC2AQ14183 400 aa12.01□□□□□ -0.49
VAMP1-201ENST00000361716 SEC23BQ15437 767 aa12.01□□□□□ -0.49
VAMP1-201ENST00000361716 ST3GAL2Q16842 350 aa12.01□□□□□ -0.49
VAMP1-201ENST00000361716 SLC5A12Q1EHB4 618 aa12.01□□□□□ -0.49
VAMP1-201ENST00000361716 PLK5Q496M5 336 aa12.01□□□□□ -0.49
VAMP1-201ENST00000361716 CEACAM20Q6UY09 585 aa12.01□□□□□ -0.49
VAMP1-201ENST00000361716 TMEM91Q6ZNR0 172 aa12.01□□□□□ -0.49
VAMP1-201ENST00000361716 RRM2BQ7LG56 351 aa12.01□□□□□ -0.49
VAMP1-201ENST00000361716 ZNF467Q7Z7K2 595 aaPredicted RBP12.01□□□□□ -0.49
VAMP1-201ENST00000361716 PLPP6Q8IY26 295 aa12.01□□□□□ -0.49
VAMP1-201ENST00000361716 ZNF683Q8IZ20 524 aa12.01□□□□□ -0.49
VAMP1-201ENST00000361716 NXPE1Q8N323 547 aa12.01□□□□□ -0.49
VAMP1-201ENST00000361716 RELL2Q8NC24 303 aaPredicted RBP12.01□□□□□ -0.49
VAMP1-201ENST00000361716 DBF4BQ8NFT6 615 aa12.01□□□□□ -0.49
VAMP1-201ENST00000361716 GTF3C2Q8WUA4 911 aaPredicted RBP12.01□□□□□ -0.49
VAMP1-201ENST00000361716 XAGE5Q8WWM1 108 aa12.01□□□□□ -0.49
VAMP1-201ENST00000361716 GINS4Q9BRT9 223 aa12.01□□□□□ -0.49
VAMP1-201ENST00000361716 FUZQ9BT04 418 aa12.01□□□□□ -0.49
VAMP1-201ENST00000361716 HTATIP2Q9BUP3 242 aa12.01□□□□□ -0.49
VAMP1-201ENST00000361716 MTG2Q9H4K7 406 aa12.01□□□□□ -0.49
VAMP1-201ENST00000361716 SZT2Q5T011 3432 aa12.01□□□□□ -0.49
VAMP1-201ENST00000361716 XIRP2A4UGR9 3374 aa12□□□□□ -0.49
VAMP1-201ENST00000361716 HEPACAM2A8MVW5 462 aa12□□□□□ -0.49
VAMP1-201ENST00000361716 RAB3BP20337 219 aa12□□□□□ -0.49
VAMP1-201ENST00000361716 SERPINA4P29622 427 aa12□□□□□ -0.49
VAMP1-201ENST00000361716 RNF144AP50876 292 aaPredicted RBP12□□□□□ -0.49
VAMP1-201ENST00000361716 AKR1C2P52895 323 aa12□□□□□ -0.49
VAMP1-201ENST00000361716 AKR1C1Q04828 323 aa12□□□□□ -0.49
VAMP1-201ENST00000361716 ARL9Q6T311 187 aa12□□□□□ -0.49
VAMP1-201ENST00000361716 SIAH3Q8IW03 269 aa12□□□□□ -0.49
VAMP1-201ENST00000361716 LINC00469Q8N7U9 141 aa12□□□□□ -0.49
VAMP1-201ENST00000361716 EMC7Q9NPA0 242 aa12□□□□□ -0.49
VAMP1-201ENST00000361716 RASD1Q9Y272 281 aa12□□□□□ -0.49
VAMP1-201ENST00000361716 ENPP4Q9Y6X5 453 aa12□□□□□ -0.49
VAMP1-201ENST00000361716 FAM74A7A6NL05 159 aa12□□□□□ -0.49
VAMP1-201ENST00000361716 GABRPO00591 440 aa12□□□□□ -0.49
VAMP1-201ENST00000361716 BET1O15155 118 aa12□□□□□ -0.49
VAMP1-201ENST00000361716 INPPL1O15357 1258 aa12□□□□□ -0.49
VAMP1-201ENST00000361716 GCM2O75603 506 aaPredicted RBP12□□□□□ -0.49
VAMP1-201ENST00000361716 ATG12O94817 140 aa12□□□□□ -0.49
VAMP1-201ENST00000361716 IFNA14P01570 189 aa12□□□□□ -0.49
VAMP1-201ENST00000361716 KLK1P06870 262 aa12□□□□□ -0.49
VAMP1-201ENST00000361716 PRKAR2AP13861 404 aaKnown RBP12□□□□□ -0.49
VAMP1-201ENST00000361716 ACRV1P26436 265 aa12□□□□□ -0.49
VAMP1-201ENST00000361716 ACSL1P33121 698 aa12□□□□□ -0.49
VAMP1-201ENST00000361716 NSG1P42857 185 aa12□□□□□ -0.49
VAMP1-201ENST00000361716 CSNK1DP48730 415 aa12□□□□□ -0.49
VAMP1-201ENST00000361716 SCRN3Q0VDG4 424 aa12□□□□□ -0.49
VAMP1-201ENST00000361716 RIN1Q13671 783 aa12□□□□□ -0.49
VAMP1-201ENST00000361716 ZNF169Q14929 603 aaPredicted RBP12□□□□□ -0.49
VAMP1-201ENST00000361716 FAM74A3Q4VXF1 159 aa12□□□□□ -0.49
VAMP1-201ENST00000361716 TRIM40Q6P9F5 258 aa12□□□□□ -0.49
VAMP1-201ENST00000361716 SLC24A5Q71RS6 500 aa12□□□□□ -0.49
VAMP1-201ENST00000361716 SYT9Q86SS6 491 aa12□□□□□ -0.49
VAMP1-201ENST00000361716 MMP21Q8N119 569 aa12□□□□□ -0.49
VAMP1-201ENST00000361716 ZNF454Q8N9F8 522 aa12□□□□□ -0.49
VAMP1-201ENST00000361716 FBXO22Q8NEZ5 403 aa12□□□□□ -0.49
VAMP1-201ENST00000361716 RPLP0P6Q8NHW5 317 aa12□□□□□ -0.49
VAMP1-201ENST00000361716 HUS1BQ8NHY5 278 aa12□□□□□ -0.49
VAMP1-201ENST00000361716 TBC1D20Q96BZ9 403 aa12□□□□□ -0.49
VAMP1-201ENST00000361716 PPCDCQ96CD2 204 aa12□□□□□ -0.49
VAMP1-201ENST00000361716 FUBP3Q96I24 572 aaKnown RBP eCLIP12□□□□□ -0.49
VAMP1-201ENST00000361716 SECISBP2Q96T21 854 aaKnown RBP12□□□□□ -0.49
VAMP1-201ENST00000361716 SLC6A17Q9H1V8 727 aa12□□□□□ -0.49
VAMP1-201ENST00000361716 RC3H2Q9HBD1 1191 aaKnown RBP12□□□□□ -0.49
VAMP1-201ENST00000361716 PDFQ9HBH1 243 aa12□□□□□ -0.49
VAMP1-201ENST00000361716 FAM120CQ9NX05 1096 aaKnown RBP12□□□□□ -0.49
VAMP1-201ENST00000361716 CFAP97Q9P2B7 532 aa12□□□□□ -0.49
VAMP1-201ENST00000361716 FTSJ1Q9UET6 329 aa12□□□□□ -0.49
VAMP1-201ENST00000361716 LSM2Q9Y333 95 aaKnown RBP12□□□□□ -0.49
VAMP1-201ENST00000361716 PIKFYVEQ9Y2I7 2098 aa12□□□□□ -0.49
VAMP1-201ENST00000361716 ASCC3Q8N3C0 2202 aaKnown RBP11.99□□□□□ -0.49
VAMP1-201ENST00000361716 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.99□□□□□ -0.49
VAMP1-201ENST00000361716 EIF4EP06730 217 aaKnown RBP11.99□□□□□ -0.49
VAMP1-201ENST00000361716 ZP3P21754 424 aa11.99□□□□□ -0.49
VAMP1-201ENST00000361716 WNT3P56703 355 aa11.99□□□□□ -0.49
VAMP1-201ENST00000361716 OR10A3P58181 314 aa11.99□□□□□ -0.49
VAMP1-201ENST00000361716 SLC3A1Q07837 685 aa11.99□□□□□ -0.49
VAMP1-201ENST00000361716 MELKQ14680 651 aa11.99□□□□□ -0.49
VAMP1-201ENST00000361716 C11orf88Q6PI97 169 aa11.99□□□□□ -0.49
VAMP1-201ENST00000361716 NCEH1Q6PIU2 408 aa11.99□□□□□ -0.49
VAMP1-201ENST00000361716 Q6ZVL8 140 aa11.99□□□□□ -0.49
VAMP1-201ENST00000361716 IQCHQ86VS3 1027 aa11.99□□□□□ -0.49
VAMP1-201ENST00000361716 BBS10Q8TAM1 723 aa11.99□□□□□ -0.49
VAMP1-201ENST00000361716 ING5Q8WYH8 240 aa11.99□□□□□ -0.49
VAMP1-201ENST00000361716 ZNF436Q9C0F3 470 aaPredicted RBP11.99□□□□□ -0.49
VAMP1-201ENST00000361716 ZSWIM8A7E2V4 1837 aa11.99□□□□□ -0.49
VAMP1-201ENST00000361716 IGLV3-10A0A075B6K4 115 aa11.99□□□□□ -0.49
VAMP1-201ENST00000361716 SHISA3A0PJX4 238 aa11.99□□□□□ -0.49
VAMP1-201ENST00000361716 KHNYNO15037 678 aaKnown RBP11.99□□□□□ -0.49
VAMP1-201ENST00000361716 SCAMP1O15126 338 aa11.99□□□□□ -0.49
VAMP1-201ENST00000361716 HPXP02790 462 aa11.99□□□□□ -0.49
VAMP1-201ENST00000361716 RD3LP0DJH9 198 aa11.99□□□□□ -0.49
VAMP1-201ENST00000361716 RAB3AP20336 220 aa11.99□□□□□ -0.49
VAMP1-201ENST00000361716 ITGB7P26010 798 aa11.99□□□□□ -0.49
VAMP1-201ENST00000361716 CTSOP43234 321 aaPredicted RBP11.99□□□□□ -0.49
VAMP1-201ENST00000361716 MVDP53602 400 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms