RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 A6NLC8 198 aa12.62□□□□□ -0.39
SRGAP3-201ENST00000360413 SOBPA7XYQ1 873 aa12.62□□□□□ -0.39
SRGAP3-201ENST00000360413 B4DGG1 531 aa12.62□□□□□ -0.39
SRGAP3-201ENST00000360413 NIPSNAP2O75323 286 aa12.62□□□□□ -0.39
SRGAP3-201ENST00000360413 CDK4P11802 303 aa12.62□□□□□ -0.39
SRGAP3-201ENST00000360413 ATP1B2P14415 290 aaPredicted RBP12.62□□□□□ -0.39
SRGAP3-201ENST00000360413 M6PRP20645 277 aa12.62□□□□□ -0.39
SRGAP3-201ENST00000360413 IDO2Q6ZQW0 420 aa12.62□□□□□ -0.39
SRGAP3-201ENST00000360413 TRMT10AQ8TBZ6 339 aaKnown RBP12.62□□□□□ -0.39
SRGAP3-201ENST00000360413 NAALAD2Q9Y3Q0 740 aa12.62□□□□□ -0.39
SRGAP3-201ENST00000360413 SALL3Q9BXA9 1300 aa12.62□□□□□ -0.39
SRGAP3-201ENST00000360413 PNPP00491 289 aa12.62□□□□□ -0.39
SRGAP3-201ENST00000360413 IL4RP24394 825 aa12.62□□□□□ -0.39
SRGAP3-201ENST00000360413 MC3RP41968 323 aa12.62□□□□□ -0.39
SRGAP3-201ENST00000360413 SUOXP51687 545 aa12.62□□□□□ -0.39
SRGAP3-201ENST00000360413 RPS21P63220 83 aaKnown RBP12.62□□□□□ -0.39
SRGAP3-201ENST00000360413 ADGRF1Q5T601 910 aa12.62□□□□□ -0.39
SRGAP3-201ENST00000360413 PIM3Q86V86 326 aa12.62□□□□□ -0.39
SRGAP3-201ENST00000360413 NPAS3Q8IXF0 933 aa12.62□□□□□ -0.39
SRGAP3-201ENST00000360413 FBXW11Q9UKB1 542 aa12.62□□□□□ -0.39
SRGAP3-201ENST00000360413 TRPM6Q9BX84 2022 aa12.62□□□□□ -0.39
SRGAP3-201ENST00000360413 RNF212BA8MTL3 300 aa12.62□□□□□ -0.39
SRGAP3-201ENST00000360413 PRSS44E7EML9 344 aa12.62□□□□□ -0.39
SRGAP3-201ENST00000360413 ZNF701M0R085 212 aaPredicted RBP12.62□□□□□ -0.39
SRGAP3-201ENST00000360413 SPATA31C1P0DKV0 1188 aa12.62□□□□□ -0.39
SRGAP3-201ENST00000360413 SLC2A5P22732 501 aa12.62□□□□□ -0.39
SRGAP3-201ENST00000360413 RBMS1P29558 406 aaKnown RBP12.62□□□□□ -0.39
SRGAP3-201ENST00000360413 GGT2P36268 569 aa12.62□□□□□ -0.39
SRGAP3-201ENST00000360413 GGT5P36269 586 aa12.62□□□□□ -0.39
SRGAP3-201ENST00000360413 RPS27AP62979 156 aaKnown RBP12.62□□□□□ -0.39
SRGAP3-201ENST00000360413 UBA52P62987 128 aaKnown RBP12.62□□□□□ -0.39
SRGAP3-201ENST00000360413 TIGD5Q53EQ6 642 aa12.62□□□□□ -0.39
SRGAP3-201ENST00000360413 AVPI1Q5T686 147 aa12.62□□□□□ -0.39
SRGAP3-201ENST00000360413 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.62□□□□□ -0.39
SRGAP3-201ENST00000360413 SLC5A11Q8WWX8 675 aa12.62□□□□□ -0.39
SRGAP3-201ENST00000360413 TAAR8Q969N4 342 aa12.62□□□□□ -0.39
SRGAP3-201ENST00000360413 NT5C3BQ969T7 300 aa12.62□□□□□ -0.39
SRGAP3-201ENST00000360413 LRIG1Q96JA1 1093 aa12.62□□□□□ -0.39
SRGAP3-201ENST00000360413 KCNA7Q96RP8 456 aa12.62□□□□□ -0.39
SRGAP3-201ENST00000360413 TMEM248Q9NWD8 314 aa12.62□□□□□ -0.39
SRGAP3-201ENST00000360413 MAS1P04201 325 aa12.61□□□□□ -0.39
SRGAP3-201ENST00000360413 F7P08709 466 aaPredicted RBP12.61□□□□□ -0.39
SRGAP3-201ENST00000360413 TGM4P49221 684 aa12.61□□□□□ -0.39
SRGAP3-201ENST00000360413 ZNF763Q0D2J5 394 aa12.61□□□□□ -0.39
SRGAP3-201ENST00000360413 PPA1Q15181 289 aa12.61□□□□□ -0.39
SRGAP3-201ENST00000360413 DDIT4LQ96D03 193 aa12.61□□□□□ -0.39
SRGAP3-201ENST00000360413 BCO2Q9BYV7 579 aa12.61□□□□□ -0.39
SRGAP3-201ENST00000360413 GLIS2Q9BZE0 524 aaPredicted RBP12.61□□□□□ -0.39
SRGAP3-201ENST00000360413 CD9P21926 228 aa12.61□□□□□ -0.39
SRGAP3-201ENST00000360413 TMIGD1Q6UXZ0 262 aa12.61□□□□□ -0.39
SRGAP3-201ENST00000360413 THAP4Q8WY91 577 aa12.61□□□□□ -0.39
SRGAP3-201ENST00000360413 SLCO2A1Q92959 643 aa12.61□□□□□ -0.39
SRGAP3-201ENST00000360413 DAZAP1Q96EP5 407 aaKnown RBP12.61□□□□□ -0.39
SRGAP3-201ENST00000360413 POLDIP3Q9BY77 421 aaKnown RBP12.61□□□□□ -0.39
SRGAP3-201ENST00000360413 C2orf42Q9NWW7 574 aa12.61□□□□□ -0.39
SRGAP3-201ENST00000360413 ACSL6Q9UKU0 697 aa12.61□□□□□ -0.39
SRGAP3-201ENST00000360413 RFXAPO00287 272 aa12.61□□□□□ -0.39
SRGAP3-201ENST00000360413 PTHP01270 115 aa12.61□□□□□ -0.39
SRGAP3-201ENST00000360413 ATP4BP51164 291 aa12.61□□□□□ -0.39
SRGAP3-201ENST00000360413 SF3A2Q15428 464 aaKnown RBP12.61□□□□□ -0.39
SRGAP3-201ENST00000360413 CERS5Q8N5B7 392 aa12.61□□□□□ -0.39
SRGAP3-201ENST00000360413 ZFP41Q8N8Y5 198 aa12.61□□□□□ -0.39
SRGAP3-201ENST00000360413 SYT14Q8NB59 555 aa12.61□□□□□ -0.39
SRGAP3-201ENST00000360413 KREMEN2Q8NCW0 462 aa12.61□□□□□ -0.39
SRGAP3-201ENST00000360413 WDR77Q9BQA1 342 aaPredicted RBP12.61□□□□□ -0.39
SRGAP3-201ENST00000360413 PINK1Q9BXM7 581 aa12.61□□□□□ -0.39
SRGAP3-201ENST00000360413 KCNH6Q9H252 994 aa12.61□□□□□ -0.39
SRGAP3-201ENST00000360413 BCAS3Q9H6U6 928 aa12.61□□□□□ -0.39
SRGAP3-201ENST00000360413 DTLQ9NZJ0 730 aa12.61□□□□□ -0.39
SRGAP3-201ENST00000360413 REV1Q9UBZ9 1251 aa12.61□□□□□ -0.39
SRGAP3-201ENST00000360413 C20orf202A1L168 122 aa12.61□□□□□ -0.39
SRGAP3-201ENST00000360413 ADAP00813 363 aa12.61□□□□□ -0.39
SRGAP3-201ENST00000360413 EIF4EP06730 217 aaKnown RBP12.61□□□□□ -0.39
SRGAP3-201ENST00000360413 FAM163BP0C2L3 166 aa12.61□□□□□ -0.39
SRGAP3-201ENST00000360413 SSTR4P31391 388 aa12.61□□□□□ -0.39
SRGAP3-201ENST00000360413 TLE1Q04724 770 aa12.61□□□□□ -0.39
SRGAP3-201ENST00000360413 RNASE10Q5GAN6 216 aaKnown RBP12.61□□□□□ -0.39
SRGAP3-201ENST00000360413 GOLGA7Q7Z5G4 137 aa12.61□□□□□ -0.39
SRGAP3-201ENST00000360413 OR8J3Q8NGG0 315 aa12.61□□□□□ -0.39
SRGAP3-201ENST00000360413 OR5H2Q8NGV7 314 aa12.61□□□□□ -0.39
SRGAP3-201ENST00000360413 RANGRFQ9HD47 186 aaPredicted RBP12.61□□□□□ -0.39
SRGAP3-201ENST00000360413 DUOX1Q9NRD9 1551 aa12.61□□□□□ -0.39
SRGAP3-201ENST00000360413 OR51F1A6NGY5 319 aa12.61□□□□□ -0.39
SRGAP3-201ENST00000360413 CAPNS1P04632 268 aa12.61□□□□□ -0.39
SRGAP3-201ENST00000360413 EMX2Q04743 252 aa12.61□□□□□ -0.39
SRGAP3-201ENST00000360413 ZNF585AQ6P3V2 769 aa12.61□□□□□ -0.39
SRGAP3-201ENST00000360413 TRIM46Q7Z4K8 759 aa12.61□□□□□ -0.39
SRGAP3-201ENST00000360413 PRSS58Q8IYP2 241 aa12.61□□□□□ -0.39
SRGAP3-201ENST00000360413 OR4F6Q8NGB9 312 aa12.61□□□□□ -0.39
SRGAP3-201ENST00000360413 PSMG2Q969U7 264 aa12.61□□□□□ -0.39
SRGAP3-201ENST00000360413 PIP5K1AQ99755 562 aa12.61□□□□□ -0.39
SRGAP3-201ENST00000360413 TMEM181Q9P2C4 612 aa12.61□□□□□ -0.39
SRGAP3-201ENST00000360413 PCDHGA5Q9Y5G8 931 aa12.61□□□□□ -0.39
SRGAP3-201ENST00000360413 TEX264Q9Y6I9 313 aa12.61□□□□□ -0.39
SRGAP3-201ENST00000360413 LMO7Q8WWI1 1683 aa12.61□□□□□ -0.39
SRGAP3-201ENST00000360413 A8MVM7 634 aa12.61□□□□□ -0.39
SRGAP3-201ENST00000360413 C4BPAP04003 597 aaKnown RBP12.61□□□□□ -0.39
SRGAP3-201ENST00000360413 CAV2P51636 162 aa12.61□□□□□ -0.39
SRGAP3-201ENST00000360413 PPP1R3AQ16821 1122 aa12.61□□□□□ -0.39
SRGAP3-201ENST00000360413 EEF1DP3Q658K8 133 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms