RNA–Protein interactions for RNA: ENST00000358181.8

CHD3-202, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD3, Length 7,286 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-202ENST00000358181 OLIG2Q13516 323 aa9.31□□□□□ -0.92
CHD3-202ENST00000358181 TEX44Q53QW1 395 aa9.31□□□□□ -0.92
CHD3-202ENST00000358181 PAPD4Q6PIY7 484 aaKnown RBP9.31□□□□□ -0.92
CHD3-202ENST00000358181 SLC46A3Q7Z3Q1 461 aa9.31□□□□□ -0.92
CHD3-202ENST00000358181 OR5L2Q8NGL0 311 aa9.31□□□□□ -0.92
CHD3-202ENST00000358181 CREB3L4Q8TEY5 395 aa9.31□□□□□ -0.92
CHD3-202ENST00000358181 CLEC4DQ8WXI8 215 aa9.31□□□□□ -0.92
CHD3-202ENST00000358181 ULBP3Q9BZM4 244 aa9.31□□□□□ -0.92
CHD3-202ENST00000358181 PRODH2Q9UF12 536 aa9.31□□□□□ -0.92
CHD3-202ENST00000358181 MYH7P12883 1935 aa9.31□□□□□ -0.92
CHD3-202ENST00000358181 M0QX08 132 aa9.31□□□□□ -0.92
CHD3-202ENST00000358181 VIPR2P41587 438 aa9.31□□□□□ -0.92
CHD3-202ENST00000358181 NKX6-1P78426 367 aaPredicted RBP9.31□□□□□ -0.92
CHD3-202ENST00000358181 IRF9Q00978 393 aa9.31□□□□□ -0.92
CHD3-202ENST00000358181 CRYZQ08257 329 aaKnown RBP9.31□□□□□ -0.92
CHD3-202ENST00000358181 DSC1Q08554 894 aa9.31□□□□□ -0.92
CHD3-202ENST00000358181 MZT1Q08AG7 82 aa9.31□□□□□ -0.92
CHD3-202ENST00000358181 PHF13Q86YI8 300 aaPredicted RBP9.31□□□□□ -0.92
CHD3-202ENST00000358181 IL17RDQ8NFM7 739 aa9.31□□□□□ -0.92
CHD3-202ENST00000358181 OR56A3Q8NH54 315 aa9.31□□□□□ -0.92
CHD3-202ENST00000358181 SLC35F5Q8WV83 523 aa9.31□□□□□ -0.92
CHD3-202ENST00000358181 SPOCK2Q92563 424 aa9.31□□□□□ -0.92
CHD3-202ENST00000358181 FAM46BQ96A09 425 aa9.31□□□□□ -0.92
CHD3-202ENST00000358181 FBXL18Q96ME1 805 aa9.31□□□□□ -0.92
CHD3-202ENST00000358181 TSNAXQ99598 290 aaKnown RBP9.31□□□□□ -0.92
CHD3-202ENST00000358181 MEIOCA2RUB1 952 aa9.31□□□□□ -0.92
CHD3-202ENST00000358181 D6RAR5 112 aa9.31□□□□□ -0.92
CHD3-202ENST00000358181 STMND1H3BQB6 276 aa9.31□□□□□ -0.92
CHD3-202ENST00000358181 KCNK5O95279 499 aa9.31□□□□□ -0.92
CHD3-202ENST00000358181 HOXA9P31269 272 aa9.31□□□□□ -0.92
CHD3-202ENST00000358181 UGT2B10P36537 528 aa9.31□□□□□ -0.92
CHD3-202ENST00000358181 MEOX1P50221 254 aa9.31□□□□□ -0.92
CHD3-202ENST00000358181 RPS21P63220 83 aaKnown RBP9.31□□□□□ -0.92
CHD3-202ENST00000358181 PRAMEF8Q5VWM4 474 aa9.31□□□□□ -0.92
CHD3-202ENST00000358181 PRAMEF7Q5VXH5 474 aa9.31□□□□□ -0.92
CHD3-202ENST00000358181 OR5M10Q6IEU7 315 aa9.31□□□□□ -0.92
CHD3-202ENST00000358181 LCTLQ6UWM7 567 aa9.31□□□□□ -0.92
CHD3-202ENST00000358181 GSG1LQ6UXU4 331 aa9.31□□□□□ -0.92
CHD3-202ENST00000358181 CMTM1Q8IZ96 169 aa9.31□□□□□ -0.92
CHD3-202ENST00000358181 KDM1BQ8NB78 822 aa9.31□□□□□ -0.92
CHD3-202ENST00000358181 CRB3Q9BUF7 120 aa9.31□□□□□ -0.92
CHD3-202ENST00000358181 HCAR1Q9BXC0 346 aa9.31□□□□□ -0.92
CHD3-202ENST00000358181 FOLH1BQ9HBA9 442 aa9.31□□□□□ -0.92
CHD3-202ENST00000358181 CUTCQ9NTM9 273 aa9.31□□□□□ -0.92
CHD3-202ENST00000358181 SMPD3Q9NY59 655 aaPredicted RBP9.31□□□□□ -0.92
CHD3-202ENST00000358181 ROBO1Q9Y6N7 1651 aa9.31□□□□□ -0.92
CHD3-202ENST00000358181 A0A1W2PPH5 198 aa9.31□□□□□ -0.92
CHD3-202ENST00000358181 A8MVM7 634 aa9.31□□□□□ -0.92
CHD3-202ENST00000358181 SERPINE2P07093 398 aa9.31□□□□□ -0.92
CHD3-202ENST00000358181 CD72P21854 359 aa9.31□□□□□ -0.92
CHD3-202ENST00000358181 DNASE1P24855 282 aa9.31□□□□□ -0.92
CHD3-202ENST00000358181 F2RL1P55085 397 aa9.31□□□□□ -0.92
CHD3-202ENST00000358181 RPS18P62269 152 aaKnown RBP9.31□□□□□ -0.92
CHD3-202ENST00000358181 HERVK_113P63132 956 aa9.31□□□□□ -0.92
CHD3-202ENST00000358181 ERVK-8P63133 956 aa9.31□□□□□ -0.92
CHD3-202ENST00000358181 KCNC3Q14003 757 aa9.31□□□□□ -0.92
CHD3-202ENST00000358181 OR7A5Q15622 319 aa9.31□□□□□ -0.92
CHD3-202ENST00000358181 TCEAL8Q8IYN2 117 aa9.31□□□□□ -0.92
CHD3-202ENST00000358181 hCG_1809904A0A1W2PP81 198 aa9.31□□□□□ -0.92
CHD3-202ENST00000358181 A0A1W2PPE2 198 aa9.31□□□□□ -0.92
CHD3-202ENST00000358181 A0A1W2PR64 198 aa9.31□□□□□ -0.92
CHD3-202ENST00000358181 EXOSC2Q13868 293 aaKnown RBP9.31□□□□□ -0.92
CHD3-202ENST00000358181 LYSMD4Q5XG99 296 aa9.31□□□□□ -0.92
CHD3-202ENST00000358181 SPARTQ8N0X7 666 aa9.31□□□□□ -0.92
CHD3-202ENST00000358181 FAM3CQ92520 227 aa9.31□□□□□ -0.92
CHD3-202ENST00000358181 SAV1Q9H4B6 383 aaPredicted RBP9.31□□□□□ -0.92
CHD3-202ENST00000358181 GPN2Q9H9Y4 310 aaPredicted RBP9.31□□□□□ -0.92
CHD3-202ENST00000358181 CALHM2Q9HA72 323 aa9.31□□□□□ -0.92
CHD3-202ENST00000358181 COQ3Q9NZJ6 369 aa9.31□□□□□ -0.92
CHD3-202ENST00000358181 FLRT1Q9NZU1 646 aa9.31□□□□□ -0.92
CHD3-202ENST00000358181 SUSD2Q9UGT4 822 aa9.31□□□□□ -0.92
CHD3-202ENST00000358181 UNC119BA6NIH7 251 aa9.3□□□□□ -0.92
CHD3-202ENST00000358181 SYT7O43581 403 aa9.3□□□□□ -0.92
CHD3-202ENST00000358181 OR2T1O43869 369 aa9.3□□□□□ -0.92
CHD3-202ENST00000358181 CT45A6P0DMU7 189 aa9.3□□□□□ -0.92
CHD3-202ENST00000358181 CT45A5P0DMU8 189 aa9.3□□□□□ -0.92
CHD3-202ENST00000358181 CT45A7P0DMV0 189 aa9.3□□□□□ -0.92
CHD3-202ENST00000358181 CT45A8P0DMV1 189 aa9.3□□□□□ -0.92
CHD3-202ENST00000358181 CT45A9P0DMV2 189 aa9.3□□□□□ -0.92
CHD3-202ENST00000358181 PRPS2P11908 318 aa9.3□□□□□ -0.92
CHD3-202ENST00000358181 DNAJB1P25685 340 aa9.3□□□□□ -0.92
CHD3-202ENST00000358181 TACR3P29371 465 aa9.3□□□□□ -0.92
CHD3-202ENST00000358181 ALKBH6Q3KRA9 238 aa9.3□□□□□ -0.92
CHD3-202ENST00000358181 CT45A2Q5DJT8 189 aa9.3□□□□□ -0.92
CHD3-202ENST00000358181 CT45A1Q5HYN5 189 aa9.3□□□□□ -0.92
CHD3-202ENST00000358181 C3P1Q6ZMU1 363 aa9.3□□□□□ -0.92
CHD3-202ENST00000358181 S100A7AQ86SG5 101 aa9.3□□□□□ -0.92
CHD3-202ENST00000358181 ASPGQ86U10 573 aa9.3□□□□□ -0.92
CHD3-202ENST00000358181 PLXDC1Q8IUK5 500 aa9.3□□□□□ -0.92
CHD3-202ENST00000358181 CSNK1A1LQ8N752 337 aa9.3□□□□□ -0.92
CHD3-202ENST00000358181 CT45A3Q8NHU0 189 aa9.3□□□□□ -0.92
CHD3-202ENST00000358181 HSD17B8Q92506 261 aa9.3□□□□□ -0.92
CHD3-202ENST00000358181 TSPAN10Q9H1Z9 355 aaPredicted RBP9.3□□□□□ -0.92
CHD3-202ENST00000358181 MAGEH1Q9H213 219 aa9.3□□□□□ -0.92
CHD3-202ENST00000358181 RNF39Q9H2S5 420 aa9.3□□□□□ -0.92
CHD3-202ENST00000358181 RHOJQ9H4E5 214 aa9.3□□□□□ -0.92
CHD3-202ENST00000358181 TFB2MQ9H5Q4 396 aaKnown RBP9.3□□□□□ -0.92
CHD3-202ENST00000358181 XPNPEP1Q9NQW7 623 aa9.3□□□□□ -0.92
CHD3-202ENST00000358181 OR1A2Q9Y585 309 aa9.3□□□□□ -0.92
CHD3-202ENST00000358181 K7EPI3 171 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms