RNA–Protein interactions for RNA: ENST00000357654.7

BRCA1-203, Transcript of BRCA1, DNA repair associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRCA1, Length 7,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-203ENST00000357654 SOCS5O75159 536 aa5.53□□□□□ -1.52
BRCA1-203ENST00000357654 RNASE1P07998 156 aaKnown RBP5.53□□□□□ -1.52
BRCA1-203ENST00000357654 IL1RNP18510 177 aa5.53□□□□□ -1.52
BRCA1-203ENST00000357654 CCNHP51946 323 aaPredicted RBP5.53□□□□□ -1.52
BRCA1-203ENST00000357654 SMSP52788 366 aa5.53□□□□□ -1.52
BRCA1-203ENST00000357654 RAB11BQ15907 218 aa5.53□□□□□ -1.52
BRCA1-203ENST00000357654 TPGS2Q68CL5 300 aa5.53□□□□□ -1.52
BRCA1-203ENST00000357654 BORAQ6PGQ7 559 aa5.53□□□□□ -1.52
BRCA1-203ENST00000357654 FJX1Q86VR8 437 aa5.53□□□□□ -1.52
BRCA1-203ENST00000357654 CMTM1Q8IZ96 169 aa5.53□□□□□ -1.52
BRCA1-203ENST00000357654 OR5AS1Q8N127 324 aa5.53□□□□□ -1.52
BRCA1-203ENST00000357654 JOSD2Q8TAC2 188 aa5.53□□□□□ -1.52
BRCA1-203ENST00000357654 HAS2Q92819 552 aa5.53□□□□□ -1.52
BRCA1-203ENST00000357654 KCTD7Q96MP8 289 aa5.53□□□□□ -1.52
BRCA1-203ENST00000357654 TRIB1Q96RU8 372 aa5.53□□□□□ -1.52
BRCA1-203ENST00000357654 TMEM109Q9BVC6 243 aa5.53□□□□□ -1.52
BRCA1-203ENST00000357654 MAF1Q9H063 256 aa5.53□□□□□ -1.52
BRCA1-203ENST00000357654 VPS29Q9UBQ0 182 aa5.53□□□□□ -1.52
BRCA1-203ENST00000357654 ACSL5Q9ULC5 683 aa5.53□□□□□ -1.52
BRCA1-203ENST00000357654 PRR36Q9H6K5 1346 aa5.53□□□□□ -1.52
BRCA1-203ENST00000357654 MYO3AQ8NEV4 1616 aa5.53□□□□□ -1.52
BRCA1-203ENST00000357654 ZC3H13Q5T200 1668 aaKnown RBP5.53□□□□□ -1.52
BRCA1-203ENST00000357654 CPS1P31327 1500 aa5.53□□□□□ -1.52
BRCA1-203ENST00000357654 C4orf47A7E2U8 309 aa5.53□□□□□ -1.52
BRCA1-203ENST00000357654 TXNL1O43396 289 aa5.53□□□□□ -1.52
BRCA1-203ENST00000357654 LIASO43766 372 aa5.53□□□□□ -1.52
BRCA1-203ENST00000357654 MRPL33O75394 65 aaKnown RBP5.53□□□□□ -1.52
BRCA1-203ENST00000357654 HMGN1P05114 100 aa5.53□□□□□ -1.52
BRCA1-203ENST00000357654 SERPINA5P05154 406 aa5.53□□□□□ -1.52
BRCA1-203ENST00000357654 ZNF182P17025 639 aaPredicted RBP5.53□□□□□ -1.52
BRCA1-203ENST00000357654 MAKP20794 623 aa5.53□□□□□ -1.52
BRCA1-203ENST00000357654 SERPINA2P20848 420 aa5.53□□□□□ -1.52
BRCA1-203ENST00000357654 KCNQ1P51787 676 aa5.53□□□□□ -1.52
BRCA1-203ENST00000357654 NR1H2P55055 460 aa5.53□□□□□ -1.52
BRCA1-203ENST00000357654 HADHBP55084 474 aaKnown RBP5.53□□□□□ -1.52
BRCA1-203ENST00000357654 COL28A1Q2UY09 1125 aa5.53□□□□□ -1.52
BRCA1-203ENST00000357654 PAMR1Q6UXH9 720 aa5.53□□□□□ -1.52
BRCA1-203ENST00000357654 BEST3Q8N1M1 668 aa5.53□□□□□ -1.52
BRCA1-203ENST00000357654 FAM83FQ8NEG4 500 aaPredicted RBP5.53□□□□□ -1.52
BRCA1-203ENST00000357654 DEFB108BQ8NET1 73 aa5.53□□□□□ -1.52
BRCA1-203ENST00000357654 NUP43Q8NFH3 380 aa5.53□□□□□ -1.52
BRCA1-203ENST00000357654 OR10X1Q8NGY0 326 aa5.53□□□□□ -1.52
BRCA1-203ENST00000357654 UCN3Q969E3 161 aa5.53□□□□□ -1.52
BRCA1-203ENST00000357654 TOE1Q96GM8 510 aaKnown RBP5.53□□□□□ -1.52
BRCA1-203ENST00000357654 ZNF514Q96K75 400 aaPredicted RBP5.53□□□□□ -1.52
BRCA1-203ENST00000357654 AGAP2Q99490 1192 aa5.53□□□□□ -1.52
BRCA1-203ENST00000357654 SMIM3Q9BZL3 60 aa5.53□□□□□ -1.52
BRCA1-203ENST00000357654 RNF39Q9H2S5 420 aa5.53□□□□□ -1.52
BRCA1-203ENST00000357654 CLK4Q9HAZ1 481 aaKnown RBP5.53□□□□□ -1.52
BRCA1-203ENST00000357654 NAGKQ9UJ70 344 aa5.53□□□□□ -1.52
BRCA1-203ENST00000357654 SSUH2Q9Y2M2 353 aa5.53□□□□□ -1.52
BRCA1-203ENST00000357654 INSL5Q9Y5Q6 135 aa5.53□□□□□ -1.52
BRCA1-203ENST00000357654 ZNF609O15014 1411 aa5.53□□□□□ -1.52
BRCA1-203ENST00000357654 C2orf78A6NCI8 922 aa5.53□□□□□ -1.52
BRCA1-203ENST00000357654 MEIS3P1A6NDR6 274 aa5.53□□□□□ -1.52
BRCA1-203ENST00000357654 OR2T1O43869 369 aa5.53□□□□□ -1.52
BRCA1-203ENST00000357654 GJB5O95377 273 aa5.53□□□□□ -1.52
BRCA1-203ENST00000357654 PRPS2P11908 318 aa5.53□□□□□ -1.52
BRCA1-203ENST00000357654 EPCAMP16422 314 aa5.53□□□□□ -1.52
BRCA1-203ENST00000357654 HNF1AP20823 631 aa5.53□□□□□ -1.52
BRCA1-203ENST00000357654 IL3RAP26951 378 aa5.53□□□□□ -1.52
BRCA1-203ENST00000357654 MC3RP41968 323 aa5.53□□□□□ -1.52
BRCA1-203ENST00000357654 GABRB2P47870 512 aa5.53□□□□□ -1.52
BRCA1-203ENST00000357654 OR1E2P47887 323 aa5.53□□□□□ -1.52
BRCA1-203ENST00000357654 RRADP55042 308 aa5.53□□□□□ -1.52
BRCA1-203ENST00000357654 CLDN2P57739 230 aa5.53□□□□□ -1.52
BRCA1-203ENST00000357654 RPL7AP62424 266 aaKnown RBP5.53□□□□□ -1.52
BRCA1-203ENST00000357654 HOXA4Q00056 320 aaPredicted RBP5.53□□□□□ -1.52
BRCA1-203ENST00000357654 TAF9Q16594 264 aa5.53□□□□□ -1.52
BRCA1-203ENST00000357654 PTF1AQ7RTS3 328 aa5.53□□□□□ -1.52
BRCA1-203ENST00000357654 YTHDF3Q7Z739 585 aaKnown RBP5.53□□□□□ -1.52
BRCA1-203ENST00000357654 LINC00471Q8N535 108 aa5.53□□□□□ -1.52
BRCA1-203ENST00000357654 ASB11Q8WXH4 323 aa5.53□□□□□ -1.52
BRCA1-203ENST00000357654 PINX1Q96BK5 328 aaKnown RBP5.53□□□□□ -1.52
BRCA1-203ENST00000357654 MOCOSQ96EN8 888 aa5.53□□□□□ -1.52
BRCA1-203ENST00000357654 CDC6Q99741 560 aa5.53□□□□□ -1.52
BRCA1-203ENST00000357654 GAREM1Q9H706 876 aa5.53□□□□□ -1.52
BRCA1-203ENST00000357654 ANKRA2Q9H9E1 313 aa5.53□□□□□ -1.52
BRCA1-203ENST00000357654 SGK494L7N484 410 aa5.53□□□□□ -1.52
BRCA1-203ENST00000357654 CDRT1O95170 752 aa5.53□□□□□ -1.52
BRCA1-203ENST00000357654 GDF5P43026 501 aa5.53□□□□□ -1.52
BRCA1-203ENST00000357654 ERVK-25P63136 954 aa5.53□□□□□ -1.52
BRCA1-203ENST00000357654 GPLD1P80108 840 aa5.53□□□□□ -1.52
BRCA1-203ENST00000357654 MAMDC4Q6UXC1 1216 aa5.53□□□□□ -1.52
BRCA1-203ENST00000357654 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.53□□□□□ -1.52
BRCA1-203ENST00000357654 ADGRA1Q86SQ6 560 aa5.53□□□□□ -1.52
BRCA1-203ENST00000357654 LGI4Q8N135 537 aa5.53□□□□□ -1.52
BRCA1-203ENST00000357654 PQLC1Q8N2U9 271 aa5.53□□□□□ -1.52
BRCA1-203ENST00000357654 PRELID2Q8N945 189 aa5.53□□□□□ -1.52
BRCA1-203ENST00000357654 OR56A3Q8NH54 315 aa5.53□□□□□ -1.52
BRCA1-203ENST00000357654 IL31RAQ8NI17 732 aa5.53□□□□□ -1.52
BRCA1-203ENST00000357654 HDAC2Q92769 488 aaKnown RBP5.53□□□□□ -1.52
BRCA1-203ENST00000357654 IL17FQ96PD4 163 aa5.53□□□□□ -1.52
BRCA1-203ENST00000357654 OR6C1Q96RD1 312 aa5.53□□□□□ -1.52
BRCA1-203ENST00000357654 ZNF347Q96SE7 839 aa5.53□□□□□ -1.52
BRCA1-203ENST00000357654 PINK1Q9BXM7 581 aa5.53□□□□□ -1.52
BRCA1-203ENST00000357654 ERVK-6Q9BXR3 956 aa5.53□□□□□ -1.52
BRCA1-203ENST00000357654 PECRQ9BY49 303 aa5.53□□□□□ -1.52
BRCA1-203ENST00000357654 LACRTQ9GZZ8 138 aa5.53□□□□□ -1.52
BRCA1-203ENST00000357654 MAGEE1Q9HCI5 957 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms