RNA–Protein interactions for RNA: ENST00000357450.8

SMC1B-201, Transcript of structural maintenance of chromosomes 1B, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMC1B, Length 4,201 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1B-201ENST00000357450 NCCRP1Q6ZVX7 275 aaPredicted RBP3.52□□□□□ -1.85
SMC1B-201ENST00000357450 SLC46A3Q7Z3Q1 461 aa3.52□□□□□ -1.85
SMC1B-201ENST00000357450 GPR180Q86V85 440 aa3.52□□□□□ -1.85
SMC1B-201ENST00000357450 SPPL2CQ8IUH8 684 aa3.52□□□□□ -1.85
SMC1B-201ENST00000357450 CHERPQ8IWX8 916 aaKnown RBP3.52□□□□□ -1.85
SMC1B-201ENST00000357450 ZNF740Q8NDX6 193 aa3.52□□□□□ -1.85
SMC1B-201ENST00000357450 LINC01560Q8TB33 94 aa3.52□□□□□ -1.85
SMC1B-201ENST00000357450 RHBDF1Q96CC6 855 aa3.52□□□□□ -1.85
SMC1B-201ENST00000357450 SECISBP2Q96T21 854 aaKnown RBP3.52□□□□□ -1.85
SMC1B-201ENST00000357450 EBF4Q9BQW3 602 aa3.52□□□□□ -1.85
SMC1B-201ENST00000357450 SLC12A9Q9BXP2 914 aa3.52□□□□□ -1.85
SMC1B-201ENST00000357450 TRIM8Q9BZR9 551 aa3.52□□□□□ -1.85
SMC1B-201ENST00000357450 ADAM19Q9H013 955 aa3.52□□□□□ -1.85
SMC1B-201ENST00000357450 PIF1Q9H611 641 aa3.52□□□□□ -1.85
SMC1B-201ENST00000357450 LPAR2Q9HBW0 351 aa3.52□□□□□ -1.85
SMC1B-201ENST00000357450 PAK1IP1Q9NWT1 392 aaPredicted RBP3.52□□□□□ -1.85
SMC1B-201ENST00000357450 TAS2R10Q9NYW0 307 aa3.52□□□□□ -1.85
SMC1B-201ENST00000357450 PRODH2Q9UF12 536 aa3.52□□□□□ -1.85
SMC1B-201ENST00000357450 GTF2A1LQ9UNN4 478 aa3.52□□□□□ -1.85
SMC1B-201ENST00000357450 FANCMQ8IYD8 2048 aa3.52□□□□□ -1.85
SMC1B-201ENST00000357450 SERTM1A2A2V5 107 aa3.52□□□□□ -1.85
SMC1B-201ENST00000357450 GAPDHSO14556 408 aaPredicted RBP3.52□□□□□ -1.85
SMC1B-201ENST00000357450 CLDN9O95484 217 aa3.52□□□□□ -1.85
SMC1B-201ENST00000357450 C1orf105O95561 183 aa3.52□□□□□ -1.85
SMC1B-201ENST00000357450 SNRPAP09012 282 aaKnown RBP3.52□□□□□ -1.85
SMC1B-201ENST00000357450 GSTM1P09488 218 aa3.52□□□□□ -1.85
SMC1B-201ENST00000357450 C1GALT1C1LP0DN25 315 aa3.52□□□□□ -1.85
SMC1B-201ENST00000357450 WT1P19544 449 aaPredicted RBP3.52□□□□□ -1.85
SMC1B-201ENST00000357450 CD247P20963 164 aa3.52□□□□□ -1.85
SMC1B-201ENST00000357450 PCMT1P22061 227 aa3.52□□□□□ -1.85
SMC1B-201ENST00000357450 SESN3P58005 492 aa3.52□□□□□ -1.85
SMC1B-201ENST00000357450 EEF1A1P68104 462 aaKnown RBP3.52□□□□□ -1.85
SMC1B-201ENST00000357450 GSTM4Q03013 218 aa3.52□□□□□ -1.85
SMC1B-201ENST00000357450 GPR68Q15743 365 aa3.52□□□□□ -1.85
SMC1B-201ENST00000357450 RBM20Q5T481 1227 aaKnown RBP3.52□□□□□ -1.85
SMC1B-201ENST00000357450 GARNL3Q5VVW2 1013 aa3.52□□□□□ -1.85
SMC1B-201ENST00000357450 TMEM225Q6GV28 225 aa3.52□□□□□ -1.85
SMC1B-201ENST00000357450 SLC16A12Q6ZSM3 486 aa3.52□□□□□ -1.85
SMC1B-201ENST00000357450 NRROSQ86YC3 692 aa3.52□□□□□ -1.85
SMC1B-201ENST00000357450 VRK3Q8IV63 474 aa3.52□□□□□ -1.85
SMC1B-201ENST00000357450 LMNTD2Q8IXW0 634 aa3.52□□□□□ -1.85
SMC1B-201ENST00000357450 C4orf33Q8N1A6 199 aa3.52□□□□□ -1.85
SMC1B-201ENST00000357450 TCAIMQ8N3R3 496 aa3.52□□□□□ -1.85
SMC1B-201ENST00000357450 FNDC5Q8NAU1 212 aa3.52□□□□□ -1.85
SMC1B-201ENST00000357450 TIMP4Q99727 224 aa3.52□□□□□ -1.85
SMC1B-201ENST00000357450 VN1R1Q9GZP7 353 aa3.52□□□□□ -1.85
SMC1B-201ENST00000357450 C1orf21Q9H246 121 aa3.52□□□□□ -1.85
SMC1B-201ENST00000357450 SLC6A15Q9H2J7 730 aa3.52□□□□□ -1.85
SMC1B-201ENST00000357450 TNFRSF19Q9NS68 423 aa3.52□□□□□ -1.85
SMC1B-201ENST00000357450 MS4A12Q9NXJ0 267 aa3.52□□□□□ -1.85
SMC1B-201ENST00000357450 ZFP69BQ9UJL9 534 aa3.52□□□□□ -1.85
SMC1B-201ENST00000357450 YARS2Q9Y2Z4 477 aaKnown RBP3.52□□□□□ -1.85
SMC1B-201ENST00000357450 ATP23Q9Y6H3 246 aa3.52□□□□□ -1.85
SMC1B-201ENST00000357450 TNRC6AQ8NDV7 1962 aaKnown RBP3.52□□□□□ -1.85
SMC1B-201ENST00000357450 HEATR5BQ9P2D3 2071 aa3.52□□□□□ -1.85
SMC1B-201ENST00000357450 GTF3C1Q12789 2109 aa3.52□□□□□ -1.85
SMC1B-201ENST00000357450 TRBV5-3A0A0A0MS03 114 aa3.52□□□□□ -1.85
SMC1B-201ENST00000357450 ZNF487B1APH4 448 aa3.52□□□□□ -1.85
SMC1B-201ENST00000357450 NTN3O00634 580 aaPredicted RBP3.52□□□□□ -1.85
SMC1B-201ENST00000357450 OTCP00480 354 aa3.52□□□□□ -1.85
SMC1B-201ENST00000357450 HPP00738 406 aa3.52□□□□□ -1.85
SMC1B-201ENST00000357450 FUCA1P04066 466 aa3.52□□□□□ -1.85
SMC1B-201ENST00000357450 HEXAP06865 529 aa3.52□□□□□ -1.85
SMC1B-201ENST00000357450 FGF5P12034 268 aa3.52□□□□□ -1.85
SMC1B-201ENST00000357450 CD99P14209 185 aa3.52□□□□□ -1.85
SMC1B-201ENST00000357450 DCDC1P59894 354 aa3.52□□□□□ -1.85
SMC1B-201ENST00000357450 RPL38P63173 70 aaKnown RBP3.52□□□□□ -1.85
SMC1B-201ENST00000357450 GNGT1P63211 74 aa3.52□□□□□ -1.85
SMC1B-201ENST00000357450 ZFP36L1Q07352 338 aaKnown RBP3.52□□□□□ -1.85
SMC1B-201ENST00000357450 PWP1Q13610 501 aa3.52□□□□□ -1.85
SMC1B-201ENST00000357450 GGTLC2Q14390 218 aa3.52□□□□□ -1.85
SMC1B-201ENST00000357450 KRTCAP3Q53RY4 240 aa3.52□□□□□ -1.85
SMC1B-201ENST00000357450 C1orf94Q6P1W5 598 aa3.52□□□□□ -1.85
SMC1B-201ENST00000357450 KIRREL2Q6UWL6 708 aa3.52□□□□□ -1.85
SMC1B-201ENST00000357450 RPTNQ6XPR3 784 aa3.52□□□□□ -1.85
SMC1B-201ENST00000357450 C20orf204Q6ZNR8 217 aa3.52□□□□□ -1.85
SMC1B-201ENST00000357450 PDSS2Q86YH6 399 aa3.52□□□□□ -1.85
SMC1B-201ENST00000357450 CENPLQ8N0S6 344 aaPredicted RBP3.52□□□□□ -1.85
SMC1B-201ENST00000357450 PLD6Q8N2A8 252 aaKnown RBP3.52□□□□□ -1.85
SMC1B-201ENST00000357450 BOLLQ8N9W6 283 aaKnown RBP3.52□□□□□ -1.85
SMC1B-201ENST00000357450 LSM14AQ8ND56 463 aaKnown RBP3.52□□□□□ -1.85
SMC1B-201ENST00000357450 PSD4Q8NDX1 1056 aa3.52□□□□□ -1.85
SMC1B-201ENST00000357450 OR6N1Q8NGY5 312 aa3.52□□□□□ -1.85
SMC1B-201ENST00000357450 PUM2Q8TB72 1066 aaKnown RBP eCLIP3.52□□□□□ -1.85
SMC1B-201ENST00000357450 EFHD2Q96C19 240 aaPredicted RBP3.52□□□□□ -1.85
SMC1B-201ENST00000357450 ZNF501Q96CX3 271 aaPredicted RBP3.52□□□□□ -1.85
SMC1B-201ENST00000357450 ECHDC3Q96DC8 303 aa3.52□□□□□ -1.85
SMC1B-201ENST00000357450 ARL5BQ96KC2 179 aa3.52□□□□□ -1.85
SMC1B-201ENST00000357450 RBM24Q9BX46 236 aaKnown RBP3.52□□□□□ -1.85
SMC1B-201ENST00000357450 KCNN2Q9H2S1 579 aa3.52□□□□□ -1.85
SMC1B-201ENST00000357450 EML4Q9HC35 981 aaKnown RBP3.52□□□□□ -1.85
SMC1B-201ENST00000357450 ZCCHC3Q9NUD5 404 aaKnown RBP3.52□□□□□ -1.85
SMC1B-201ENST00000357450 MARCOQ9UEW3 520 aaPredicted RBP3.52□□□□□ -1.85
SMC1B-201ENST00000357450 ZNF490Q9ULM2 529 aaPredicted RBP3.52□□□□□ -1.85
SMC1B-201ENST00000357450 SOX13Q9UN79 622 aa3.52□□□□□ -1.85
SMC1B-201ENST00000357450 PROCRQ9UNN8 238 aa3.52□□□□□ -1.85
SMC1B-201ENST00000357450 ZNF232Q9UNY5 417 aa3.52□□□□□ -1.85
SMC1B-201ENST00000357450 LAMP3Q9UQV4 416 aa3.52□□□□□ -1.85
SMC1B-201ENST00000357450 TIMM22Q9Y584 194 aa3.52□□□□□ -1.85
SMC1B-201ENST00000357450 DOCK10Q96BY6 2186 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms