RNA–Protein interactions for RNA: ENST00000354291.8

DDX55-202, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 1,004 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-202ENST00000354291 CR1P17927 2039 aa14.34□□□□□ -0.11
DDX55-202ENST00000354291 LRRC14BA6NHZ5 514 aa14.33□□□□□ -0.12
DDX55-202ENST00000354291 OR6C76A6NM76 312 aa14.33□□□□□ -0.12
DDX55-202ENST00000354291 KLF4O43474 513 aa14.33□□□□□ -0.12
DDX55-202ENST00000354291 GPRIN2O60269 458 aa14.33□□□□□ -0.12
DDX55-202ENST00000354291 TGFB1P01137 390 aa14.33□□□□□ -0.12
DDX55-202ENST00000354291 C2P06681 752 aa14.33□□□□□ -0.12
DDX55-202ENST00000354291 PCNAP12004 261 aa14.33□□□□□ -0.12
DDX55-202ENST00000354291 MTHFD2P13995 350 aa14.33□□□□□ -0.12
DDX55-202ENST00000354291 PHBP35232 272 aa14.33□□□□□ -0.12
DDX55-202ENST00000354291 BIKQ13323 160 aa14.33□□□□□ -0.12
DDX55-202ENST00000354291 ACAP2Q15057 778 aa14.33□□□□□ -0.12
DDX55-202ENST00000354291 ETFDHQ16134 617 aa14.33□□□□□ -0.12
DDX55-202ENST00000354291 KLC3Q6P597 504 aa14.33□□□□□ -0.12
DDX55-202ENST00000354291 CHMP1BQ7LBR1 199 aa14.33□□□□□ -0.12
DDX55-202ENST00000354291 ZNF610Q8N9Z0 462 aa14.33□□□□□ -0.12
DDX55-202ENST00000354291 KCTD4Q8WVF5 259 aa14.33□□□□□ -0.12
DDX55-202ENST00000354291 GTPBP3Q969Y2 492 aaKnown RBP14.33□□□□□ -0.12
DDX55-202ENST00000354291 KCNK17Q96T54 332 aa14.33□□□□□ -0.12
DDX55-202ENST00000354291 CENPKQ9BS16 269 aa14.33□□□□□ -0.12
DDX55-202ENST00000354291 LRRC1Q9BTT6 524 aa14.33□□□□□ -0.12
DDX55-202ENST00000354291 LRTM1Q9HBL6 345 aa14.33□□□□□ -0.12
DDX55-202ENST00000354291 ZDHHC18Q9NUE0 388 aa14.33□□□□□ -0.12
DDX55-202ENST00000354291 RYDENQ9NUL5 291 aaKnown RBP14.33□□□□□ -0.12
DDX55-202ENST00000354291 ANGPTL3Q9Y5C1 460 aa14.33□□□□□ -0.12
DDX55-202ENST00000354291 ESYT3A0FGR9 886 aa14.32□□□□□ -0.12
DDX55-202ENST00000354291 ADAM11O75078 769 aa14.32□□□□□ -0.12
DDX55-202ENST00000354291 SCELO95171 688 aa14.32□□□□□ -0.12
DDX55-202ENST00000354291 CRHP06850 196 aa14.32□□□□□ -0.12
DDX55-202ENST00000354291 KRT15P19012 456 aa14.32□□□□□ -0.12
DDX55-202ENST00000354291 TBXA2RP21731 343 aa14.32□□□□□ -0.12
DDX55-202ENST00000354291 HIST1H1TP22492 207 aaPredicted RBP14.32□□□□□ -0.12
DDX55-202ENST00000354291 PIK3CBP42338 1070 aa14.32□□□□□ -0.12
DDX55-202ENST00000354291 KIR2DL2P43627 348 aaPredicted RBP14.32□□□□□ -0.12
DDX55-202ENST00000354291 TMED10P49755 219 aaKnown RBP14.32□□□□□ -0.12
DDX55-202ENST00000354291 ALDH18A1P54886 795 aaKnown RBP14.32□□□□□ -0.12
DDX55-202ENST00000354291 NRG3P56975 720 aa14.32□□□□□ -0.12
DDX55-202ENST00000354291 SLAMF1Q13291 335 aa14.32□□□□□ -0.12
DDX55-202ENST00000354291 EXOC3L2Q2M3D2 409 aa14.32□□□□□ -0.12
DDX55-202ENST00000354291 DEPDC1Q5TB30 811 aa14.32□□□□□ -0.12
DDX55-202ENST00000354291 KHDRBS2Q5VWX1 349 aaKnown RBP14.32□□□□□ -0.12
DDX55-202ENST00000354291 LIPJQ5W064 366 aa14.32□□□□□ -0.12
DDX55-202ENST00000354291 OR4C11Q6IEV9 310 aa14.32□□□□□ -0.12
DDX55-202ENST00000354291 OR2A2Q6IF42 318 aa14.32□□□□□ -0.12
DDX55-202ENST00000354291 GRHL2Q6ISB3 625 aa14.32□□□□□ -0.12
DDX55-202ENST00000354291 ST13P4Q8IZP2 240 aaPredicted RBP14.32□□□□□ -0.12
DDX55-202ENST00000354291 CENPLQ8N0S6 344 aaPredicted RBP14.32□□□□□ -0.12
DDX55-202ENST00000354291 TEX9Q8N6V9 391 aa14.32□□□□□ -0.12
DDX55-202ENST00000354291 AKAP1Q92667 903 aaKnown RBP eCLIP14.32□□□□□ -0.12
DDX55-202ENST00000354291 TANKQ92844 425 aa14.32□□□□□ -0.12
DDX55-202ENST00000354291 TP53INP1Q96A56 240 aa14.32□□□□□ -0.12
DDX55-202ENST00000354291 RGMAQ96B86 450 aa14.32□□□□□ -0.12
DDX55-202ENST00000354291 CTHRC1Q96CG8 243 aa14.32□□□□□ -0.12
DDX55-202ENST00000354291 MRRFQ96E11 262 aaKnown RBP14.32□□□□□ -0.12
DDX55-202ENST00000354291 PLPPR2Q96GM1 343 aa14.32□□□□□ -0.12
DDX55-202ENST00000354291 ZNF845Q96IR2 970 aaPredicted RBP14.32□□□□□ -0.12
DDX55-202ENST00000354291 TSPYL1Q9H0U9 437 aa14.32□□□□□ -0.12
DDX55-202ENST00000354291 SLCO5A1Q9H2Y9 848 aa14.32□□□□□ -0.12
DDX55-202ENST00000354291 MS4A12Q9NXJ0 267 aa14.32□□□□□ -0.12
DDX55-202ENST00000354291 TSC22D4Q9Y3Q8 395 aa14.32□□□□□ -0.12
DDX55-202ENST00000354291 PCDHGA11Q9Y5H2 935 aa14.32□□□□□ -0.12
DDX55-202ENST00000354291 FRG2CA6NGY1 282 aa14.31□□□□□ -0.12
DDX55-202ENST00000354291 WASHC1A8K0Z3 465 aa14.31□□□□□ -0.12
DDX55-202ENST00000354291 SAP18O00422 153 aaKnown RBP14.31□□□□□ -0.12
DDX55-202ENST00000354291 PRKRAO75569 313 aaKnown RBP14.31□□□□□ -0.12
DDX55-202ENST00000354291 KLHL2O95198 593 aa14.31□□□□□ -0.12
DDX55-202ENST00000354291 CLPSP04118 112 aa14.31□□□□□ -0.12
DDX55-202ENST00000354291 THBDP07204 575 aa14.31□□□□□ -0.12
DDX55-202ENST00000354291 GFAPP14136 432 aa14.31□□□□□ -0.12
DDX55-202ENST00000354291 TCEA1P23193 301 aaKnown RBP14.31□□□□□ -0.12
DDX55-202ENST00000354291 TYK2P29597 1187 aa14.31□□□□□ -0.12
DDX55-202ENST00000354291 SSTR4P31391 388 aa14.31□□□□□ -0.12
DDX55-202ENST00000354291 CDKN1AP38936 164 aa14.31□□□□□ -0.12
DDX55-202ENST00000354291 SSR2P43308 183 aa14.31□□□□□ -0.12
DDX55-202ENST00000354291 LHX2P50458 406 aa14.31□□□□□ -0.12
DDX55-202ENST00000354291 ARFIP1P53367 373 aa14.31□□□□□ -0.12
DDX55-202ENST00000354291 RPS13P62277 151 aaKnown RBP14.31□□□□□ -0.12
DDX55-202ENST00000354291 IRF9Q00978 393 aa14.31□□□□□ -0.12
DDX55-202ENST00000354291 FUT7Q11130 342 aa14.31□□□□□ -0.12
DDX55-202ENST00000354291 UAP1Q16222 522 aaPredicted RBP14.31□□□□□ -0.12
DDX55-202ENST00000354291 PFKFB4Q16877 469 aa14.31□□□□□ -0.12
DDX55-202ENST00000354291 C18orf63Q68DL7 685 aa14.31□□□□□ -0.12
DDX55-202ENST00000354291 DESI1Q6ICB0 168 aa14.31□□□□□ -0.12
DDX55-202ENST00000354291 METTL2BQ6P1Q9 378 aaKnown RBP14.31□□□□□ -0.12
DDX55-202ENST00000354291 IFNEQ86WN2 208 aa14.31□□□□□ -0.12
DDX55-202ENST00000354291 HUS1BQ8NHY5 278 aa14.31□□□□□ -0.12
DDX55-202ENST00000354291 REPS1Q96D71 796 aa14.31□□□□□ -0.12
DDX55-202ENST00000354291 SORBS1Q9BX66 1292 aaKnown RBP14.31□□□□□ -0.12
DDX55-202ENST00000354291 ACTR8Q9H981 624 aa14.31□□□□□ -0.12
DDX55-202ENST00000354291 GALNT9Q9HCQ5 603 aa14.31□□□□□ -0.12
DDX55-202ENST00000354291 TAS2R10Q9NYW0 307 aa14.31□□□□□ -0.12
DDX55-202ENST00000354291 HEY2Q9UBP5 337 aa14.31□□□□□ -0.12
DDX55-202ENST00000354291 DLGAP4Q9Y2H0 992 aa14.31□□□□□ -0.12
DDX55-202ENST00000354291 TNPO3Q9Y5L0 923 aaKnown RBP14.31□□□□□ -0.12
DDX55-202ENST00000354291 ALPK2Q86TB3 2170 aa14.3□□□□□ -0.12
DDX55-202ENST00000354291 A0A096LPK6 155 aa14.3□□□□□ -0.12
DDX55-202ENST00000354291 HMX2A2RU54 273 aa14.3□□□□□ -0.12
DDX55-202ENST00000354291 SLC22A20A6NK97 555 aa14.3□□□□□ -0.12
DDX55-202ENST00000354291 UGDHO60701 494 aa14.3□□□□□ -0.12
DDX55-202ENST00000354291 ICOSLGO75144 302 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms