RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 CTNNA2P26232 953 aa1.43□□□□□ -2.18
BRCA1-202ENST00000354071 LAP3P28838 519 aa1.43□□□□□ -2.18
BRCA1-202ENST00000354071 USP8P40818 1118 aa1.43□□□□□ -2.18
BRCA1-202ENST00000354071 ACADVLP49748 655 aa1.43□□□□□ -2.18
BRCA1-202ENST00000354071 TPMTP51580 245 aa1.43□□□□□ -2.18
BRCA1-202ENST00000354071 AP3M2P53677 418 aa1.43□□□□□ -2.18
BRCA1-202ENST00000354071 MLLT10P55197 1068 aa1.43□□□□□ -2.18
BRCA1-202ENST00000354071 LIM2P55344 173 aa1.43□□□□□ -2.18
BRCA1-202ENST00000354071 LINC01547P58512 204 aaPredicted RBP1.43□□□□□ -2.18
BRCA1-202ENST00000354071 CDKN3Q16667 212 aa1.43□□□□□ -2.18
BRCA1-202ENST00000354071 ACCSLQ4AC99 568 aa1.43□□□□□ -2.18
BRCA1-202ENST00000354071 CT45A2Q5DJT8 189 aa1.43□□□□□ -2.18
BRCA1-202ENST00000354071 SEL1L2Q5TEA6 688 aa1.43□□□□□ -2.18
BRCA1-202ENST00000354071 SLC22A10Q63ZE4 541 aa1.43□□□□□ -2.18
BRCA1-202ENST00000354071 ZNF771Q7L3S4 317 aaPredicted RBP1.43□□□□□ -2.18
BRCA1-202ENST00000354071 ZNF575Q86XF7 245 aa1.43□□□□□ -2.18
BRCA1-202ENST00000354071 LINC00518Q8N0U6 118 aa1.43□□□□□ -2.18
BRCA1-202ENST00000354071 POC1AQ8NBT0 407 aa1.43□□□□□ -2.18
BRCA1-202ENST00000354071 CCDC148Q8NFR7 591 aa1.43□□□□□ -2.18
BRCA1-202ENST00000354071 OR5L2Q8NGL0 311 aa1.43□□□□□ -2.18
BRCA1-202ENST00000354071 PIGCQ92535 297 aa1.43□□□□□ -2.18
BRCA1-202ENST00000354071 PNPLA2Q96AD5 504 aa1.43□□□□□ -2.18
BRCA1-202ENST00000354071 RTP4Q96DX8 246 aa1.43□□□□□ -2.18
BRCA1-202ENST00000354071 PELI1Q96FA3 418 aa1.43□□□□□ -2.18
BRCA1-202ENST00000354071 NSL1Q96IY1 281 aa1.43□□□□□ -2.18
BRCA1-202ENST00000354071 NPY6RQ99463 290 aa1.43□□□□□ -2.18
BRCA1-202ENST00000354071 ZBTB18Q99592 522 aa1.43□□□□□ -2.18
BRCA1-202ENST00000354071 BCL7BQ9BQE9 202 aa1.43□□□□□ -2.18
BRCA1-202ENST00000354071 APOOQ9BUR5 198 aa1.43□□□□□ -2.18
BRCA1-202ENST00000354071 FNDC4Q9H6D8 234 aaPredicted RBP1.43□□□□□ -2.18
BRCA1-202ENST00000354071 AZI2Q9H6S1 392 aa1.43□□□□□ -2.18
BRCA1-202ENST00000354071 NRN1Q9NPD7 142 aa1.43□□□□□ -2.18
BRCA1-202ENST00000354071 CHST11Q9NPF2 352 aa1.43□□□□□ -2.18
BRCA1-202ENST00000354071 IL1RAPQ9NPH3 570 aa1.43□□□□□ -2.18
BRCA1-202ENST00000354071 ETNK2Q9NVF9 386 aa1.43□□□□□ -2.18
BRCA1-202ENST00000354071 SPHK1Q9NYA1 384 aa1.43□□□□□ -2.18
BRCA1-202ENST00000354071 PTTG3PQ9NZH4 202 aa1.43□□□□□ -2.18
BRCA1-202ENST00000354071 COX16Q9P0S2 106 aa1.43□□□□□ -2.18
BRCA1-202ENST00000354071 TRIP12Q14669 1992 aaPredicted RBP1.43□□□□□ -2.18
BRCA1-202ENST00000354071 ARID2Q68CP9 1835 aa1.43□□□□□ -2.18
BRCA1-202ENST00000354071 DNAH3Q8TD57 4116 aa1.43□□□□□ -2.18
BRCA1-202ENST00000354071 TENM4Q6N022 2769 aa1.43□□□□□ -2.18
BRCA1-202ENST00000354071 A0A1W2PPI3 338 aa1.42□□□□□ -2.18
BRCA1-202ENST00000354071 CLEC18AA5D8T8 446 aa1.42□□□□□ -2.18
BRCA1-202ENST00000354071 CCDC169A6NNP5 214 aa1.42□□□□□ -2.18
BRCA1-202ENST00000354071 CASKO14936 926 aa1.42□□□□□ -2.18
BRCA1-202ENST00000354071 ATP6V0E1O15342 81 aa1.42□□□□□ -2.18
BRCA1-202ENST00000354071 SYNGR3O43761 229 aa1.42□□□□□ -2.18
BRCA1-202ENST00000354071 GAGE7O76087 117 aa1.42□□□□□ -2.18
BRCA1-202ENST00000354071 GAGE12FP0CL80 117 aa1.42□□□□□ -2.18
BRCA1-202ENST00000354071 GAGE12GP0CL81 117 aa1.42□□□□□ -2.18
BRCA1-202ENST00000354071 GAGE12IP0CL82 117 aa1.42□□□□□ -2.18
BRCA1-202ENST00000354071 CETN2P41208 172 aa1.42□□□□□ -2.18
BRCA1-202ENST00000354071 OR3A2P47893 321 aa1.42□□□□□ -2.18
BRCA1-202ENST00000354071 CSRP3P50461 194 aa1.42□□□□□ -2.18
BRCA1-202ENST00000354071 PRMT2P55345 433 aa1.42□□□□□ -2.18
BRCA1-202ENST00000354071 DCDC1P59894 354 aa1.42□□□□□ -2.18
BRCA1-202ENST00000354071 GAGE1Q13065 139 aa1.42□□□□□ -2.18
BRCA1-202ENST00000354071 GAGE4Q13068 117 aa1.42□□□□□ -2.18
BRCA1-202ENST00000354071 KIR2DS3Q14952 304 aa1.42□□□□□ -2.18
BRCA1-202ENST00000354071 HLFQ16534 295 aa1.42□□□□□ -2.18
BRCA1-202ENST00000354071 TRNP1Q6NT89 227 aa1.42□□□□□ -2.18
BRCA1-202ENST00000354071 SLC25A47Q6Q0C1 308 aa1.42□□□□□ -2.18
BRCA1-202ENST00000354071 PRSS57Q6UWY2 283 aa1.42□□□□□ -2.18
BRCA1-202ENST00000354071 LRRC70Q7Z2Q7 622 aa1.42□□□□□ -2.18
BRCA1-202ENST00000354071 DHDDSQ86SQ9 333 aa1.42□□□□□ -2.18
BRCA1-202ENST00000354071 FAM228AQ86W67 206 aa1.42□□□□□ -2.18
BRCA1-202ENST00000354071 GPC2Q8N158 579 aa1.42□□□□□ -2.18
BRCA1-202ENST00000354071 PRSS35Q8N3Z0 413 aa1.42□□□□□ -2.18
BRCA1-202ENST00000354071 ANKFN1Q8N957 763 aa1.42□□□□□ -2.18
BRCA1-202ENST00000354071 CLEC18CQ8NCF0 446 aa1.42□□□□□ -2.18
BRCA1-202ENST00000354071 CNIH3Q8TBE1 160 aa1.42□□□□□ -2.18
BRCA1-202ENST00000354071 CCT7Q99832 543 aa1.42□□□□□ -2.18
BRCA1-202ENST00000354071 TBCDQ9BTW9 1192 aa1.42□□□□□ -2.18
BRCA1-202ENST00000354071 NDUFAF3Q9BU61 184 aa1.42□□□□□ -2.18
BRCA1-202ENST00000354071 LRRC40Q9H9A6 602 aa1.42□□□□□ -2.18
BRCA1-202ENST00000354071 UBTD1Q9HAC8 227 aa1.42□□□□□ -2.18
BRCA1-202ENST00000354071 ZFP14Q9HCL3 533 aa1.42□□□□□ -2.18
BRCA1-202ENST00000354071 ERVK-18Q9QC07 812 aa1.42□□□□□ -2.18
BRCA1-202ENST00000354071 CRLS1Q9UJA2 301 aa1.42□□□□□ -2.18
BRCA1-202ENST00000354071 ERVK-19Q9WJR5 959 aa1.42□□□□□ -2.18
BRCA1-202ENST00000354071 MAB21L2Q9Y586 359 aa1.42□□□□□ -2.18
BRCA1-202ENST00000354071 RGPD8O14715 1765 aaPredicted RBP1.42□□□□□ -2.18
BRCA1-202ENST00000354071 RGPD5Q99666 1765 aa1.42□□□□□ -2.18
BRCA1-202ENST00000354071 ARFGEF1Q9Y6D6 1849 aa1.42□□□□□ -2.18
BRCA1-202ENST00000354071 CFAP54Q96N23 3096 aa1.42□□□□□ -2.18
BRCA1-202ENST00000354071 E9PBE3 544 aa1.42□□□□□ -2.18
BRCA1-202ENST00000354071 STX7O15400 261 aaKnown RBP1.42□□□□□ -2.18
BRCA1-202ENST00000354071 ZNF264O43296 627 aa1.42□□□□□ -2.18
BRCA1-202ENST00000354071 ZNF749O43361 778 aa1.42□□□□□ -2.18
BRCA1-202ENST00000354071 RANBP6O60518 1105 aaKnown RBP1.42□□□□□ -2.18
BRCA1-202ENST00000354071 ECI2O75521 394 aa1.42□□□□□ -2.18
BRCA1-202ENST00000354071 IDH1O75874 414 aaKnown RBP1.42□□□□□ -2.18
BRCA1-202ENST00000354071 PDE9AO76083 593 aa1.42□□□□□ -2.18
BRCA1-202ENST00000354071 HOXC6P09630 235 aa1.42□□□□□ -2.18
BRCA1-202ENST00000354071 RPL35AP18077 110 aaKnown RBP1.42□□□□□ -2.18
BRCA1-202ENST00000354071 TNNI3P19429 210 aa1.42□□□□□ -2.18
BRCA1-202ENST00000354071 FBLP22087 321 aaKnown RBP1.42□□□□□ -2.18
BRCA1-202ENST00000354071 HOXD3P31249 432 aaPredicted RBP1.42□□□□□ -2.18
BRCA1-202ENST00000354071 STIP1P31948 543 aaKnown RBP1.42□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms