RNA–Protein interactions for RNA: ENST00000348987.4

SCARF1-202, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARF1, Length 2,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-202ENST00000348987 VSX2P58304 361 aaPredicted RBP17.6■□□□□ 0.41
SCARF1-202ENST00000348987 LRRC74AQ0VAA2 488 aa17.6■□□□□ 0.41
SCARF1-202ENST00000348987 RAB33AQ14088 237 aa17.6■□□□□ 0.41
SCARF1-202ENST00000348987 NTRK2Q16620 822 aa17.6■□□□□ 0.41
SCARF1-202ENST00000348987 MARCH9Q86YJ5 346 aa17.6■□□□□ 0.41
SCARF1-202ENST00000348987 SRFBP1Q8NEF9 429 aaKnown RBP17.6■□□□□ 0.41
SCARF1-202ENST00000348987 OR52H1Q8NGJ2 320 aa17.6■□□□□ 0.41
SCARF1-202ENST00000348987 HSD17B8Q92506 261 aa17.6■□□□□ 0.41
SCARF1-202ENST00000348987 OTULINQ96BN8 352 aa17.6■□□□□ 0.41
SCARF1-202ENST00000348987 TMEM169Q96HH4 297 aa17.6■□□□□ 0.41
SCARF1-202ENST00000348987 WRAP53Q9BUR4 548 aaKnown RBP17.6■□□□□ 0.41
SCARF1-202ENST00000348987 RNF32Q9H0A6 362 aa17.6■□□□□ 0.41
SCARF1-202ENST00000348987 TMEM38AQ9H6F2 299 aa17.6■□□□□ 0.41
SCARF1-202ENST00000348987 SPATA6Q9NWH7 488 aaPredicted RBP17.6■□□□□ 0.41
SCARF1-202ENST00000348987 PPIEQ9UNP9 301 aaKnown RBP17.6■□□□□ 0.41
SCARF1-202ENST00000348987 KCNMB2Q9Y691 235 aa17.6■□□□□ 0.41
SCARF1-202ENST00000348987 SERTM1A2A2V5 107 aa17.6■□□□□ 0.41
SCARF1-202ENST00000348987 E7EQ34 232 aa17.6■□□□□ 0.41
SCARF1-202ENST00000348987 SGTAO43765 313 aa17.6■□□□□ 0.41
SCARF1-202ENST00000348987 NAT2P11245 290 aa17.6■□□□□ 0.41
SCARF1-202ENST00000348987 KELP23276 732 aa17.6■□□□□ 0.41
SCARF1-202ENST00000348987 SNRPD1P62314 119 aaKnown RBP17.6■□□□□ 0.41
SCARF1-202ENST00000348987 C22orf39Q6P5X5 142 aa17.6■□□□□ 0.41
SCARF1-202ENST00000348987 CD200R1LQ6Q8B3 271 aa17.6■□□□□ 0.41
SCARF1-202ENST00000348987 FAM26EQ8N5C1 309 aa17.6■□□□□ 0.41
SCARF1-202ENST00000348987 BEST4Q8NFU0 473 aa17.6■□□□□ 0.41
SCARF1-202ENST00000348987 RC3H2Q9HBD1 1191 aaKnown RBP17.6■□□□□ 0.41
SCARF1-202ENST00000348987 MRPL17Q9NRX2 175 aaKnown RBP17.6■□□□□ 0.41
SCARF1-202ENST00000348987 TAS2R7Q9NYW3 318 aa17.6■□□□□ 0.41
SCARF1-202ENST00000348987 MGAT4BQ9UQ53 548 aa17.6■□□□□ 0.41
SCARF1-202ENST00000348987 CCL26Q9Y258 94 aa17.6■□□□□ 0.41
SCARF1-202ENST00000348987 ZNF106Q9H2Y7 1883 aaKnown RBP17.59■□□□□ 0.41
SCARF1-202ENST00000348987 TEX13CA0A0J9YWL9 993 aa17.59■□□□□ 0.41
SCARF1-202ENST00000348987 TRDV1A0A1B0GX56 115 aa17.59■□□□□ 0.41
SCARF1-202ENST00000348987 A0A1W2PRU2 124 aa17.59■□□□□ 0.41
SCARF1-202ENST00000348987 PIPSLA2A3N6 862 aa17.59■□□□□ 0.41
SCARF1-202ENST00000348987 NDUFA2O43678 99 aa17.59■□□□□ 0.41
SCARF1-202ENST00000348987 C8GP07360 202 aa17.59■□□□□ 0.41
SCARF1-202ENST00000348987 ASMTP46597 345 aa17.59■□□□□ 0.41
SCARF1-202ENST00000348987 PCBP3P57721 371 aaKnown RBP17.59■□□□□ 0.41
SCARF1-202ENST00000348987 DOC2AQ14183 400 aa17.59■□□□□ 0.41
SCARF1-202ENST00000348987 RPS26P11Q5JNZ5 115 aaPredicted RBP17.59■□□□□ 0.41
SCARF1-202ENST00000348987 CD276Q5ZPR3 534 aa17.59■□□□□ 0.41
SCARF1-202ENST00000348987 ACSM5Q6NUN0 579 aa17.59■□□□□ 0.41
SCARF1-202ENST00000348987 KANSL1Q7Z3B3 1105 aa17.59■□□□□ 0.41
SCARF1-202ENST00000348987 LHFPL3Q86UP9 236 aa17.59■□□□□ 0.41
SCARF1-202ENST00000348987 RBM45Q8IUH3 476 aaKnown RBP17.59■□□□□ 0.41
SCARF1-202ENST00000348987 LMNTD1Q8N9Z9 388 aa17.59■□□□□ 0.41
SCARF1-202ENST00000348987 OR6M1Q8NGM8 313 aa17.59■□□□□ 0.41
SCARF1-202ENST00000348987 RFT1Q96AA3 541 aa17.59■□□□□ 0.41
SCARF1-202ENST00000348987 WBP1Q96G27 269 aa17.59■□□□□ 0.41
SCARF1-202ENST00000348987 NLNQ9BYT8 704 aa17.59■□□□□ 0.41
SCARF1-202ENST00000348987 SEMA3GQ9NS98 782 aa17.59■□□□□ 0.41
SCARF1-202ENST00000348987 IMP3Q9NV31 184 aaKnown RBP17.59■□□□□ 0.41
SCARF1-202ENST00000348987 ZNF624Q9P2J8 865 aaPredicted RBP17.59■□□□□ 0.41
SCARF1-202ENST00000348987 ATP6V1HQ9UI12 483 aa17.59■□□□□ 0.41
SCARF1-202ENST00000348987 LSM7Q9UK45 103 aaKnown RBP17.59■□□□□ 0.41
SCARF1-202ENST00000348987 DVL2O14641 736 aa17.59■□□□□ 0.41
SCARF1-202ENST00000348987 GAS1P54826 345 aa17.59■□□□□ 0.41
SCARF1-202ENST00000348987 ARHGAP15Q53QZ3 475 aa17.59■□□□□ 0.41
SCARF1-202ENST00000348987 NDUFAF5Q5TEU4 345 aa17.59■□□□□ 0.41
SCARF1-202ENST00000348987 PGBD2Q6P3X8 592 aa17.59■□□□□ 0.41
SCARF1-202ENST00000348987 TRIM40Q6P9F5 258 aa17.59■□□□□ 0.41
SCARF1-202ENST00000348987 SLC30A8Q8IWU4 369 aa17.59■□□□□ 0.41
SCARF1-202ENST00000348987 PIAS4Q8N2W9 510 aaPredicted RBP17.59■□□□□ 0.41
SCARF1-202ENST00000348987 ENAMQ9NRM1 1142 aa17.59■□□□□ 0.41
SCARF1-202ENST00000348987 PTTG3PQ9NZH4 202 aa17.59■□□□□ 0.41
SCARF1-202ENST00000348987 CACNG2Q9Y698 323 aa17.59■□□□□ 0.41
SCARF1-202ENST00000348987 CD8B2A6NJW9 211 aa17.58■□□□□ 0.41
SCARF1-202ENST00000348987 EEF1E1O43324 174 aaKnown RBP17.58■□□□□ 0.41
SCARF1-202ENST00000348987 FKTNO75072 461 aa17.58■□□□□ 0.41
SCARF1-202ENST00000348987 CD8BP10966 210 aa17.58■□□□□ 0.41
SCARF1-202ENST00000348987 ZP3P21754 424 aa17.58■□□□□ 0.41
SCARF1-202ENST00000348987 VEGFBP49765 207 aa17.58■□□□□ 0.41
SCARF1-202ENST00000348987 HNMTP50135 292 aa17.58■□□□□ 0.41
SCARF1-202ENST00000348987 MC1RQ01726 317 aa17.58■□□□□ 0.41
SCARF1-202ENST00000348987 CDKL4Q5MAI5 379 aa17.58■□□□□ 0.41
SCARF1-202ENST00000348987 IL20RBQ6UXL0 311 aa17.58■□□□□ 0.41
SCARF1-202ENST00000348987 Q6ZVL8 140 aa17.58■□□□□ 0.41
SCARF1-202ENST00000348987 HTR3DQ70Z44 454 aa17.58■□□□□ 0.41
SCARF1-202ENST00000348987 CAMKMTQ7Z624 323 aa17.58■□□□□ 0.41
SCARF1-202ENST00000348987 TCEAL8Q8IYN2 117 aa17.58■□□□□ 0.41
SCARF1-202ENST00000348987 OXR1Q8N573 874 aa17.58■□□□□ 0.41
SCARF1-202ENST00000348987 RNFT2Q96EX2 444 aa17.58■□□□□ 0.41
SCARF1-202ENST00000348987 SIPA1Q96FS4 1042 aa17.58■□□□□ 0.41
SCARF1-202ENST00000348987 C19orf43Q9BQ61 176 aa17.58■□□□□ 0.41
SCARF1-202ENST00000348987 RSPO3Q9BXY4 272 aaPredicted RBP17.58■□□□□ 0.41
SCARF1-202ENST00000348987 SAP130Q9H0E3 1048 aa17.58■□□□□ 0.41
SCARF1-202ENST00000348987 ADAM30Q9UKF2 790 aa17.58■□□□□ 0.41
SCARF1-202ENST00000348987 KIAA0100Q14667 2235 aaKnown RBP17.58■□□□□ 0.4
SCARF1-202ENST00000348987 hCG_1807616A0A1W2PRN6 198 aa17.58■□□□□ 0.4
SCARF1-202ENST00000348987 CELP19835 753 aa17.58■□□□□ 0.4
SCARF1-202ENST00000348987 ZNF273Q14593 569 aa17.58■□□□□ 0.4
SCARF1-202ENST00000348987 GINS1Q14691 196 aa17.58■□□□□ 0.4
SCARF1-202ENST00000348987 ZNF630Q2M218 657 aaPredicted RBP17.58■□□□□ 0.4
SCARF1-202ENST00000348987 IDNKQ5T6J7 187 aa17.58■□□□□ 0.4
SCARF1-202ENST00000348987 TCTN3Q6NUS6 607 aa17.58■□□□□ 0.4
SCARF1-202ENST00000348987 DEF8Q6ZN54 512 aa17.58■□□□□ 0.4
SCARF1-202ENST00000348987 HSD11B1LQ7Z5J1 315 aa17.58■□□□□ 0.4
SCARF1-202ENST00000348987 MED8Q96G25 268 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms