RNA–Protein interactions for RNA: ENST00000346495.6

TSPAN3-202, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-202ENST00000346495 ALPLP05186 524 aa20.03■□□□□ 0.8
TSPAN3-202ENST00000346495 TRA2AQ13595 282 aaKnown RBP eCLIP20.03■□□□□ 0.8
TSPAN3-202ENST00000346495 CYP27C1Q4G0S4 372 aa20.03■□□□□ 0.8
TSPAN3-202ENST00000346495 PHF19Q5T6S3 580 aa20.03■□□□□ 0.8
TSPAN3-202ENST00000346495 ARHGAP40Q5TG30 622 aa20.03■□□□□ 0.8
TSPAN3-202ENST00000346495 RHBDD2Q6NTF9 364 aa20.03■□□□□ 0.8
TSPAN3-202ENST00000346495 SLITRK4Q8IW52 837 aa20.03■□□□□ 0.8
TSPAN3-202ENST00000346495 OR52R1Q8NGF1 315 aa20.03■□□□□ 0.8
TSPAN3-202ENST00000346495 EPYCQ99645 322 aa20.03■□□□□ 0.8
TSPAN3-202ENST00000346495 OSBPL10Q9BXB5 764 aa20.03■□□□□ 0.8
TSPAN3-202ENST00000346495 GABARAPL1Q9H0R8 117 aa20.03■□□□□ 0.8
TSPAN3-202ENST00000346495 SLC38A1Q9H2H9 487 aa20.03■□□□□ 0.8
TSPAN3-202ENST00000346495 SAMHD1Q9Y3Z3 626 aaKnown RBP20.03■□□□□ 0.8
TSPAN3-202ENST00000346495 MAGED1Q9Y5V3 778 aaPredicted RBP20.03■□□□□ 0.8
TSPAN3-202ENST00000346495 ENPP4Q9Y6X5 453 aa20.03■□□□□ 0.8
TSPAN3-202ENST00000346495 DSPPQ9NZW4 1301 aa20.03■□□□□ 0.8
TSPAN3-202ENST00000346495 COL5A1P20908 1838 aaPredicted RBP20.02■□□□□ 0.8
TSPAN3-202ENST00000346495 LNP1A1A4G5 178 aa20.02■□□□□ 0.8
TSPAN3-202ENST00000346495 PRAMEF25A6NGN4 478 aa20.02■□□□□ 0.8
TSPAN3-202ENST00000346495 A8MVJ9 347 aa20.02■□□□□ 0.8
TSPAN3-202ENST00000346495 D6RAR5 112 aa20.02■□□□□ 0.8
TSPAN3-202ENST00000346495 HYAL3O43820 417 aaPredicted RBP20.02■□□□□ 0.8
TSPAN3-202ENST00000346495 DNAJB5O75953 348 aa20.02■□□□□ 0.8
TSPAN3-202ENST00000346495 GP1BAP07359 652 aa20.02■□□□□ 0.8
TSPAN3-202ENST00000346495 S1PR1P21453 382 aa20.02■□□□□ 0.8
TSPAN3-202ENST00000346495 PPP1R8Q12972 351 aaKnown RBP20.02■□□□□ 0.8
TSPAN3-202ENST00000346495 PDK3Q15120 406 aa20.02■□□□□ 0.8
TSPAN3-202ENST00000346495 C1orf189Q5VU69 101 aa20.02■□□□□ 0.8
TSPAN3-202ENST00000346495 QSOX2Q6ZRP7 698 aa20.02■□□□□ 0.8
TSPAN3-202ENST00000346495 APOBEC4Q8WW27 367 aaKnown RBP20.02■□□□□ 0.8
TSPAN3-202ENST00000346495 PTCHD1Q96NR3 888 aa20.02■□□□□ 0.8
TSPAN3-202ENST00000346495 RDH12Q96NR8 316 aa20.02■□□□□ 0.8
TSPAN3-202ENST00000346495 AMBRA1Q9C0C7 1298 aa20.02■□□□□ 0.8
TSPAN3-202ENST00000346495 TRIM45Q9H8W5 580 aaPredicted RBP20.02■□□□□ 0.8
TSPAN3-202ENST00000346495 SIDT1Q9NXL6 827 aaKnown RBP20.02■□□□□ 0.8
TSPAN3-202ENST00000346495 SATB2Q9UPW6 733 aa20.02■□□□□ 0.8
TSPAN3-202ENST00000346495 FAM32AQ9Y421 112 aaKnown RBP20.02■□□□□ 0.8
TSPAN3-202ENST00000346495 AK1P00568 194 aa20.02■□□□□ 0.79
TSPAN3-202ENST00000346495 IFNA16P05015 189 aa20.02■□□□□ 0.79
TSPAN3-202ENST00000346495 ALPPP05187 535 aa20.02■□□□□ 0.79
TSPAN3-202ENST00000346495 ACP1P24666 158 aa20.02■□□□□ 0.79
TSPAN3-202ENST00000346495 RRM2P31350 389 aa20.02■□□□□ 0.79
TSPAN3-202ENST00000346495 MAP3K8P41279 467 aa20.02■□□□□ 0.79
TSPAN3-202ENST00000346495 PPP2R2BQ00005 443 aa20.02■□□□□ 0.79
TSPAN3-202ENST00000346495 CHRNEQ04844 493 aa20.02■□□□□ 0.79
TSPAN3-202ENST00000346495 MERTKQ12866 999 aa20.02■□□□□ 0.79
TSPAN3-202ENST00000346495 ZNF155Q12901 538 aaPredicted RBP20.02■□□□□ 0.79
TSPAN3-202ENST00000346495 OLIG3Q7RTU3 272 aa20.02■□□□□ 0.79
TSPAN3-202ENST00000346495 HS3ST5Q8IZT8 346 aa20.02■□□□□ 0.79
TSPAN3-202ENST00000346495 CHDHQ8NE62 594 aaPredicted RBP20.02■□□□□ 0.79
TSPAN3-202ENST00000346495 TFAP2CQ92754 450 aa20.02■□□□□ 0.79
TSPAN3-202ENST00000346495 HOXB13Q92826 284 aaPredicted RBP20.02■□□□□ 0.79
TSPAN3-202ENST00000346495 ADI1Q9BV57 179 aa20.02■□□□□ 0.79
TSPAN3-202ENST00000346495 PINK1Q9BXM7 581 aa20.02■□□□□ 0.79
TSPAN3-202ENST00000346495 MKKSQ9NPJ1 570 aaPredicted RBP20.02■□□□□ 0.79
TSPAN3-202ENST00000346495 CCDC88CQ9P219 2028 aa20.01■□□□□ 0.79
TSPAN3-202ENST00000346495 OR2W5A6NFC9 320 aa20.01■□□□□ 0.79
TSPAN3-202ENST00000346495 RECKO95980 971 aa20.01■□□□□ 0.79
TSPAN3-202ENST00000346495 ATXN8OSP0DMR3 200 aa20.01■□□□□ 0.79
TSPAN3-202ENST00000346495 RHCEP18577 417 aa20.01■□□□□ 0.79
TSPAN3-202ENST00000346495 PDX1P52945 283 aa20.01■□□□□ 0.79
TSPAN3-202ENST00000346495 ZNF267Q14586 743 aaPredicted RBP20.01■□□□□ 0.79
TSPAN3-202ENST00000346495 PUM1Q14671 1186 aaKnown RBP eCLIP20.01■□□□□ 0.79
TSPAN3-202ENST00000346495 MFSD4BQ5TF39 518 aa20.01■□□□□ 0.79
TSPAN3-202ENST00000346495 MLIPQ5VWP3 458 aa20.01■□□□□ 0.79
TSPAN3-202ENST00000346495 BPHLQ86WA6 291 aaPredicted RBP20.01■□□□□ 0.79
TSPAN3-202ENST00000346495 DHRSXQ8N5I4 330 aa20.01■□□□□ 0.79
TSPAN3-202ENST00000346495 RHBDD1Q8TEB9 315 aa20.01■□□□□ 0.79
TSPAN3-202ENST00000346495 CNBD2Q96M20 576 aa20.01■□□□□ 0.79
TSPAN3-202ENST00000346495 PIP5K1AQ99755 562 aa20.01■□□□□ 0.79
TSPAN3-202ENST00000346495 SMURF2Q9HAU4 748 aa20.01■□□□□ 0.79
TSPAN3-202ENST00000346495 FTSJ1Q9UET6 329 aa20.01■□□□□ 0.79
TSPAN3-202ENST00000346495 HBQ1P09105 142 aa20■□□□□ 0.79
TSPAN3-202ENST00000346495 PABPC4LP0CB38 370 aaKnown RBP20■□□□□ 0.79
TSPAN3-202ENST00000346495 THRBP10828 461 aa20■□□□□ 0.79
TSPAN3-202ENST00000346495 TNNI3P19429 210 aa20■□□□□ 0.79
TSPAN3-202ENST00000346495 CSTF2P33240 577 aaKnown RBP eCLIP20■□□□□ 0.79
TSPAN3-202ENST00000346495 DUSP8Q13202 625 aa20■□□□□ 0.79
TSPAN3-202ENST00000346495 ZNHIT3Q15649 155 aaPredicted RBP20■□□□□ 0.79
TSPAN3-202ENST00000346495 MINDY4Q4G0A6 757 aa20■□□□□ 0.79
TSPAN3-202ENST00000346495 CARM1Q86X55 608 aa20■□□□□ 0.79
TSPAN3-202ENST00000346495 CHERPQ8IWX8 916 aaKnown RBP20■□□□□ 0.79
TSPAN3-202ENST00000346495 COX18Q8N8Q8 333 aa20■□□□□ 0.79
TSPAN3-202ENST00000346495 GPR151Q8TDV0 419 aa20■□□□□ 0.79
TSPAN3-202ENST00000346495 GATA6Q92908 595 aa20■□□□□ 0.79
TSPAN3-202ENST00000346495 SDF2Q99470 211 aa20■□□□□ 0.79
TSPAN3-202ENST00000346495 LMF2Q9BU23 707 aaKnown RBP20■□□□□ 0.79
TSPAN3-202ENST00000346495 RSPO3Q9BXY4 272 aaPredicted RBP20■□□□□ 0.79
TSPAN3-202ENST00000346495 ANKRD60Q9BZ19 345 aa20■□□□□ 0.79
TSPAN3-202ENST00000346495 MTHFD2LQ9H903 347 aaPredicted RBP20■□□□□ 0.79
TSPAN3-202ENST00000346495 CACYBPQ9HB71 228 aaKnown RBP20■□□□□ 0.79
TSPAN3-202ENST00000346495 FOLH1BQ9HBA9 442 aa20■□□□□ 0.79
TSPAN3-202ENST00000346495 WDR45Q9Y484 360 aa20■□□□□ 0.79
TSPAN3-202ENST00000346495 TESMINQ9Y4I5 508 aa20■□□□□ 0.79
TSPAN3-202ENST00000346495 MAGEA13PA6NCF6 341 aa19.99■□□□□ 0.79
TSPAN3-202ENST00000346495 TNFRSF11BO00300 401 aa19.99■□□□□ 0.79
TSPAN3-202ENST00000346495 PRAMEF2O60811 474 aa19.99■□□□□ 0.79
TSPAN3-202ENST00000346495 SCRG1O75711 98 aa19.99■□□□□ 0.79
TSPAN3-202ENST00000346495 NKX2-2O95096 273 aa19.99■□□□□ 0.79
TSPAN3-202ENST00000346495 ALBP02768 609 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms