RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 PTGER1P34995 402 aa10.95□□□□□ -0.66
SNCA-202ENST00000345009 PRIM2P49643 509 aa10.95□□□□□ -0.66
SNCA-202ENST00000345009 EMDP50402 254 aa10.95□□□□□ -0.66
SNCA-202ENST00000345009 TNFSF10P50591 281 aa10.95□□□□□ -0.66
SNCA-202ENST00000345009 NR0B1P51843 470 aaKnown RBP10.95□□□□□ -0.66
SNCA-202ENST00000345009 MRPS22P82650 360 aaKnown RBP10.95□□□□□ -0.66
SNCA-202ENST00000345009 ZNF155Q12901 538 aaPredicted RBP10.95□□□□□ -0.66
SNCA-202ENST00000345009 NFATC3Q12968 1075 aa10.95□□□□□ -0.66
SNCA-202ENST00000345009 TUBA3CQ13748 450 aa10.95□□□□□ -0.66
SNCA-202ENST00000345009 OR1C1Q15619 314 aa10.95□□□□□ -0.66
SNCA-202ENST00000345009 MAPKAPK3Q16644 382 aa10.95□□□□□ -0.66
SNCA-202ENST00000345009 FHL5Q5TD97 284 aa10.95□□□□□ -0.66
SNCA-202ENST00000345009 TUBA3EQ6PEY2 450 aa10.95□□□□□ -0.66
SNCA-202ENST00000345009 PAOXQ6QHF9 649 aa10.95□□□□□ -0.66
SNCA-202ENST00000345009 PCSK4Q6UW60 755 aa10.95□□□□□ -0.66
SNCA-202ENST00000345009 TMEM64Q6YI46 380 aa10.95□□□□□ -0.66
SNCA-202ENST00000345009 CYP4Z2PQ8N1L4 340 aa10.95□□□□□ -0.66
SNCA-202ENST00000345009 CDRT4Q8N9R6 151 aa10.95□□□□□ -0.66
SNCA-202ENST00000345009 TMEM178AQ8NBL3 297 aa10.95□□□□□ -0.66
SNCA-202ENST00000345009 NUP43Q8NFH3 380 aa10.95□□□□□ -0.66
SNCA-202ENST00000345009 OR4A15Q8NGL6 344 aa10.95□□□□□ -0.66
SNCA-202ENST00000345009 PSMA8Q8TAA3 256 aa10.95□□□□□ -0.66
SNCA-202ENST00000345009 SFXN5Q8TD22 340 aa10.95□□□□□ -0.66
SNCA-202ENST00000345009 ADIPOR1Q96A54 375 aa10.95□□□□□ -0.66
SNCA-202ENST00000345009 TEX37Q96LM6 180 aa10.95□□□□□ -0.66
SNCA-202ENST00000345009 MS4A4EQ96PG1 132 aa10.95□□□□□ -0.66
SNCA-202ENST00000345009 PANX1Q96RD7 426 aa10.95□□□□□ -0.66
SNCA-202ENST00000345009 RASL10BQ96S79 203 aa10.95□□□□□ -0.66
SNCA-202ENST00000345009 FAM107BQ9H098 131 aa10.95□□□□□ -0.66
SNCA-202ENST00000345009 LIN28AQ9H9Z2 209 aaKnown RBP10.95□□□□□ -0.66
SNCA-202ENST00000345009 ZBTB20Q9HC78 741 aaPredicted RBP10.95□□□□□ -0.66
SNCA-202ENST00000345009 TIMMDC1Q9NPL8 285 aa10.95□□□□□ -0.66
SNCA-202ENST00000345009 ZCCHC3Q9NUD5 404 aaKnown RBP10.95□□□□□ -0.66
SNCA-202ENST00000345009 PLA2G3Q9NZ20 509 aa10.95□□□□□ -0.66
SNCA-202ENST00000345009 NTMQ9P121 344 aa10.95□□□□□ -0.66
SNCA-202ENST00000345009 FAF1Q9UNN5 650 aaPredicted RBP10.95□□□□□ -0.66
SNCA-202ENST00000345009 GPR55Q9Y2T6 319 aaPredicted RBP10.95□□□□□ -0.66
SNCA-202ENST00000345009 PCDHGB6Q9Y5F9 930 aa10.95□□□□□ -0.66
SNCA-202ENST00000345009 PCDHGB3Q9Y5G1 929 aa10.95□□□□□ -0.66
SNCA-202ENST00000345009 COPG1Q9Y678 874 aaKnown RBP10.95□□□□□ -0.66
SNCA-202ENST00000345009 FRG2CA6NGY1 282 aa10.94□□□□□ -0.66
SNCA-202ENST00000345009 CCDC154A6NI56 674 aa10.94□□□□□ -0.66
SNCA-202ENST00000345009 TMEM200CA6NKL6 621 aa10.94□□□□□ -0.66
SNCA-202ENST00000345009 K7EM74 188 aa10.94□□□□□ -0.66
SNCA-202ENST00000345009 CCDC22O60826 627 aa10.94□□□□□ -0.66
SNCA-202ENST00000345009 ANP32DO95626 131 aa10.94□□□□□ -0.66
SNCA-202ENST00000345009 CPSF4O95639 269 aaKnown RBP10.94□□□□□ -0.66
SNCA-202ENST00000345009 PDGFAP04085 211 aa10.94□□□□□ -0.66
SNCA-202ENST00000345009 CLPSP04118 112 aa10.94□□□□□ -0.66
SNCA-202ENST00000345009 EFNA1P20827 205 aaPredicted RBP10.94□□□□□ -0.66
SNCA-202ENST00000345009 UQCRC2P22695 453 aa10.94□□□□□ -0.66
SNCA-202ENST00000345009 ADSLP30566 484 aaPredicted RBP10.94□□□□□ -0.66
SNCA-202ENST00000345009 CDK9P50750 372 aaKnown RBP10.94□□□□□ -0.66
SNCA-202ENST00000345009 ANXA11P50995 505 aaKnown RBP10.94□□□□□ -0.66
SNCA-202ENST00000345009 DGKQP52824 942 aa10.94□□□□□ -0.66
SNCA-202ENST00000345009 SEC24CP53992 1094 aa10.94□□□□□ -0.66
SNCA-202ENST00000345009 GYS2P54840 703 aa10.94□□□□□ -0.66
SNCA-202ENST00000345009 PSMD4P55036 377 aaKnown RBP10.94□□□□□ -0.66
SNCA-202ENST00000345009 HBA1P69905 142 aa10.94□□□□□ -0.66
SNCA-202ENST00000345009 ZNF169Q14929 603 aaPredicted RBP10.94□□□□□ -0.66
SNCA-202ENST00000345009 CYP27C1Q4G0S4 372 aa10.94□□□□□ -0.66
SNCA-202ENST00000345009 AGKQ53H12 422 aa10.94□□□□□ -0.66
SNCA-202ENST00000345009 IL20RBQ6UXL0 311 aa10.94□□□□□ -0.66
SNCA-202ENST00000345009 RTL4Q6ZR62 310 aa10.94□□□□□ -0.66
SNCA-202ENST00000345009 Q6ZS92 163 aa10.94□□□□□ -0.66
SNCA-202ENST00000345009 SPATA21Q7Z572 469 aa10.94□□□□□ -0.66
SNCA-202ENST00000345009 SLC44A2Q8IWA5 706 aaPredicted RBP10.94□□□□□ -0.66
SNCA-202ENST00000345009 RBMXL3Q8N7X1 1067 aaKnown RBP10.94□□□□□ -0.66
SNCA-202ENST00000345009 FAM98AQ8NCA5 519 aaKnown RBP10.94□□□□□ -0.66
SNCA-202ENST00000345009 ITCHQ96J02 903 aa10.94□□□□□ -0.66
SNCA-202ENST00000345009 VSTM2LQ96N03 204 aa10.94□□□□□ -0.66
SNCA-202ENST00000345009 CCDC115Q96NT0 180 aa10.94□□□□□ -0.66
SNCA-202ENST00000345009 BTBD9Q96Q07 612 aa10.94□□□□□ -0.66
SNCA-202ENST00000345009 NPAS2Q99743 824 aa10.94□□□□□ -0.66
SNCA-202ENST00000345009 ELAC2Q9BQ52 826 aaKnown RBP10.94□□□□□ -0.66
SNCA-202ENST00000345009 ITPAQ9BY32 194 aa10.94□□□□□ -0.66
SNCA-202ENST00000345009 TRIM45Q9H8W5 580 aaPredicted RBP10.94□□□□□ -0.66
SNCA-202ENST00000345009 FOLH1BQ9HBA9 442 aa10.94□□□□□ -0.66
SNCA-202ENST00000345009 Q9N2J8 555 aa10.94□□□□□ -0.66
SNCA-202ENST00000345009 ANKRD10Q9NXR5 420 aa10.94□□□□□ -0.66
SNCA-202ENST00000345009 CCDC167Q9P0B6 97 aa10.94□□□□□ -0.66
SNCA-202ENST00000345009 GMPR2Q9P2T1 348 aaKnown RBP10.94□□□□□ -0.66
SNCA-202ENST00000345009 VPS4AQ9UN37 437 aa10.94□□□□□ -0.66
SNCA-202ENST00000345009 NPFFR2Q9Y5X5 522 aa10.94□□□□□ -0.66
SNCA-202ENST00000345009 DUXAA6NLW8 204 aa10.93□□□□□ -0.66
SNCA-202ENST00000345009 KLRC4-KLRK1H3BQV0 150 aa10.93□□□□□ -0.66
SNCA-202ENST00000345009 RFXANKO14593 260 aa10.93□□□□□ -0.66
SNCA-202ENST00000345009 TO15178 435 aa10.93□□□□□ -0.66
SNCA-202ENST00000345009 SLC25A12O75746 678 aa10.93□□□□□ -0.66
SNCA-202ENST00000345009 KCNH1O95259 989 aa10.93□□□□□ -0.66
SNCA-202ENST00000345009 F10P00742 488 aa10.93□□□□□ -0.66
SNCA-202ENST00000345009 ALOX5P09917 674 aa10.93□□□□□ -0.66
SNCA-202ENST00000345009 FBXO45P0C2W1 286 aa10.93□□□□□ -0.66
SNCA-202ENST00000345009 IL12AP29459 219 aa10.93□□□□□ -0.66
SNCA-202ENST00000345009 SOAT1P35610 550 aa10.93□□□□□ -0.66
SNCA-202ENST00000345009 CHI3L1P36222 383 aaPredicted RBP10.93□□□□□ -0.66
SNCA-202ENST00000345009 SOX3P41225 446 aa10.93□□□□□ -0.66
SNCA-202ENST00000345009 TRPC1P48995 793 aa10.93□□□□□ -0.66
SNCA-202ENST00000345009 WNT3P56703 355 aa10.93□□□□□ -0.66
SNCA-202ENST00000345009 TXNL4AP83876 142 aaKnown RBP10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms