RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 IL21RQ9HBE5 538 aa6.81□□□□□ -1.32
VCAN-202ENST00000342785 CSNK1G3Q9Y6M4 447 aa6.81□□□□□ -1.32
VCAN-202ENST00000342785 SCDO00767 359 aa6.8□□□□□ -1.32
VCAN-202ENST00000342785 FCER2P06734 321 aa6.8□□□□□ -1.32
VCAN-202ENST00000342785 HIST1H1TP22492 207 aaPredicted RBP6.8□□□□□ -1.32
VCAN-202ENST00000342785 NTSR1P30989 418 aa6.8□□□□□ -1.32
VCAN-202ENST00000342785 TSPAN5P62079 268 aa6.8□□□□□ -1.32
VCAN-202ENST00000342785 RPS15AP62244 130 aaKnown RBP6.8□□□□□ -1.32
VCAN-202ENST00000342785 SYT6Q5T7P8 510 aaPredicted RBP6.8□□□□□ -1.32
VCAN-202ENST00000342785 ALG1LQ6GMV1 187 aa6.8□□□□□ -1.32
VCAN-202ENST00000342785 FIGLAQ6QHK4 219 aa6.8□□□□□ -1.32
VCAN-202ENST00000342785 OR8H3Q8N146 312 aa6.8□□□□□ -1.32
VCAN-202ENST00000342785 CSNK1A1LQ8N752 337 aa6.8□□□□□ -1.32
VCAN-202ENST00000342785 THEM6Q8WUY1 208 aa6.8□□□□□ -1.32
VCAN-202ENST00000342785 PKMYT1Q99640 499 aa6.8□□□□□ -1.32
VCAN-202ENST00000342785 LTB4R2Q9NPC1 389 aa6.8□□□□□ -1.32
VCAN-202ENST00000342785 PSORS1C1Q9UIG5 152 aa6.8□□□□□ -1.32
VCAN-202ENST00000342785 GXYLT2A0PJZ3 443 aa6.8□□□□□ -1.32
VCAN-202ENST00000342785 FZD6O60353 706 aa6.8□□□□□ -1.32
VCAN-202ENST00000342785 SLCO2B1O94956 709 aa6.8□□□□□ -1.32
VCAN-202ENST00000342785 DBIP07108 87 aaKnown RBP6.8□□□□□ -1.32
VCAN-202ENST00000342785 ATP5A1P25705 553 aaKnown RBP6.8□□□□□ -1.32
VCAN-202ENST00000342785 TNFSF8P32971 234 aa6.8□□□□□ -1.32
VCAN-202ENST00000342785 SLC6A11P48066 632 aa6.8□□□□□ -1.32
VCAN-202ENST00000342785 MASP1P48740 699 aa6.8□□□□□ -1.32
VCAN-202ENST00000342785 PODNL1Q6PEZ8 512 aa6.8□□□□□ -1.32
VCAN-202ENST00000342785 GDPD1Q8N9F7 314 aa6.8□□□□□ -1.32
VCAN-202ENST00000342785 OR2L5Q8NG80 312 aa6.8□□□□□ -1.32
VCAN-202ENST00000342785 OR8K3Q8NH51 312 aa6.8□□□□□ -1.32
VCAN-202ENST00000342785 SLC38A5Q8WUX1 472 aa6.8□□□□□ -1.32
VCAN-202ENST00000342785 KLHDC7BQ96G42 594 aa6.8□□□□□ -1.32
VCAN-202ENST00000342785 PTCHD1Q96NR3 888 aa6.8□□□□□ -1.32
VCAN-202ENST00000342785 CACNG6Q9BXT2 260 aa6.8□□□□□ -1.32
VCAN-202ENST00000342785 IRF2BPLQ9H1B7 796 aa6.8□□□□□ -1.32
VCAN-202ENST00000342785 MKL2Q9ULH7 1088 aa6.8□□□□□ -1.32
VCAN-202ENST00000342785 KNTC1P50748 2209 aa6.8□□□□□ -1.32
VCAN-202ENST00000342785 TIMP1P01033 207 aa6.8□□□□□ -1.32
VCAN-202ENST00000342785 PTHP01270 115 aa6.8□□□□□ -1.32
VCAN-202ENST00000342785 RNH1P13489 461 aaKnown RBP6.8□□□□□ -1.32
VCAN-202ENST00000342785 NPPBP16860 134 aa6.8□□□□□ -1.32
VCAN-202ENST00000342785 CBLP22681 906 aa6.8□□□□□ -1.32
VCAN-202ENST00000342785 MMP12P39900 470 aa6.8□□□□□ -1.32
VCAN-202ENST00000342785 CDK3Q00526 305 aa6.8□□□□□ -1.32
VCAN-202ENST00000342785 ADPRMQ3LIE5 342 aa6.8□□□□□ -1.32
VCAN-202ENST00000342785 UBE2Q1Q7Z7E8 422 aa6.8□□□□□ -1.32
VCAN-202ENST00000342785 OR51L1Q8NGJ5 315 aa6.8□□□□□ -1.32
VCAN-202ENST00000342785 NSMAFQ92636 917 aa6.8□□□□□ -1.32
VCAN-202ENST00000342785 OCEL1Q9H607 264 aa6.8□□□□□ -1.32
VCAN-202ENST00000342785 DNMT3BQ9UBC3 853 aaKnown RBP6.8□□□□□ -1.32
VCAN-202ENST00000342785 PPIEQ9UNP9 301 aaKnown RBP6.8□□□□□ -1.32
VCAN-202ENST00000342785 HCFC2Q9Y5Z7 792 aa6.8□□□□□ -1.32
VCAN-202ENST00000342785 C17orf113A0A1B0GUU1 675 aa6.8□□□□□ -1.32
VCAN-202ENST00000342785 LRRN3E7EW58 273 aa6.8□□□□□ -1.32
VCAN-202ENST00000342785 GFRA2O00451 464 aa6.8□□□□□ -1.32
VCAN-202ENST00000342785 CASC3O15234 703 aaKnown RBP6.8□□□□□ -1.32
VCAN-202ENST00000342785 SLC19A2O60779 497 aa6.8□□□□□ -1.32
VCAN-202ENST00000342785 STOMP27105 288 aa6.8□□□□□ -1.32
VCAN-202ENST00000342785 ACTC1P68032 377 aa6.8□□□□□ -1.32
VCAN-202ENST00000342785 ACTA1P68133 377 aa6.8□□□□□ -1.32
VCAN-202ENST00000342785 SNTB2Q13425 540 aaKnown RBP6.8□□□□□ -1.32
VCAN-202ENST00000342785 RPL13AP3Q6NVV1 102 aa6.8□□□□□ -1.32
VCAN-202ENST00000342785 SPATC1Q76KD6 591 aa6.8□□□□□ -1.32
VCAN-202ENST00000342785 ARMCX6Q7L4S7 300 aa6.8□□□□□ -1.32
VCAN-202ENST00000342785 TMIEQ8NEW7 156 aa6.8□□□□□ -1.32
VCAN-202ENST00000342785 OR9A2Q8NGT5 310 aa6.8□□□□□ -1.32
VCAN-202ENST00000342785 SUN5Q8TC36 379 aa6.8□□□□□ -1.32
VCAN-202ENST00000342785 TSACCQ96A04 125 aaPredicted RBP6.8□□□□□ -1.32
VCAN-202ENST00000342785 MMABQ96EY8 250 aaPredicted RBP6.8□□□□□ -1.32
VCAN-202ENST00000342785 HS6ST2Q96MM7 605 aa6.8□□□□□ -1.32
VCAN-202ENST00000342785 LYSMD1Q96S90 227 aa6.8□□□□□ -1.32
VCAN-202ENST00000342785 LRRN3Q9H3W5 708 aa6.8□□□□□ -1.32
VCAN-202ENST00000342785 SFXN1Q9H9B4 322 aa6.8□□□□□ -1.32
VCAN-202ENST00000342785 PRTFDC1Q9NRG1 225 aa6.8□□□□□ -1.32
VCAN-202ENST00000342785 ACSS1Q9NUB1 689 aaPredicted RBP6.8□□□□□ -1.32
VCAN-202ENST00000342785 NDUFAF4Q9P032 175 aa6.8□□□□□ -1.32
VCAN-202ENST00000342785 PFDN2Q9UHV9 154 aa6.8□□□□□ -1.32
VCAN-202ENST00000342785 ZNF225Q9UK10 706 aa6.8□□□□□ -1.32
VCAN-202ENST00000342785 KHNYNO15037 678 aaKnown RBP6.8□□□□□ -1.32
VCAN-202ENST00000342785 PRKYO43930 277 aa6.8□□□□□ -1.32
VCAN-202ENST00000342785 AK1P00568 194 aa6.8□□□□□ -1.32
VCAN-202ENST00000342785 HTR1AP08908 422 aa6.8□□□□□ -1.32
VCAN-202ENST00000342785 FURINP09958 794 aa6.8□□□□□ -1.32
VCAN-202ENST00000342785 ADORA3P0DMS8 318 aa6.8□□□□□ -1.32
VCAN-202ENST00000342785 CCKBRP32239 447 aa6.8□□□□□ -1.32
VCAN-202ENST00000342785 VEGFBP49765 207 aa6.8□□□□□ -1.32
VCAN-202ENST00000342785 SLC35A2P78381 396 aa6.8□□□□□ -1.32
VCAN-202ENST00000342785 SHC2P98077 582 aa6.8□□□□□ -1.32
VCAN-202ENST00000342785 CYHR1Q6ZMK1 362 aa6.8□□□□□ -1.32
VCAN-202ENST00000342785 PJA1Q8NG27 643 aa6.8□□□□□ -1.32
VCAN-202ENST00000342785 OR56A3Q8NH54 315 aa6.8□□□□□ -1.32
VCAN-202ENST00000342785 CEP76Q8TAP6 659 aa6.8□□□□□ -1.32
VCAN-202ENST00000342785 ZNF431Q8TF32 576 aaPredicted RBP6.8□□□□□ -1.32
VCAN-202ENST00000342785 C15orf40Q8WUR7 153 aa6.8□□□□□ -1.32
VCAN-202ENST00000342785 ACOT11Q8WXI4 607 aaPredicted RBP6.8□□□□□ -1.32
VCAN-202ENST00000342785 SLC41A3Q96GZ6 507 aa6.8□□□□□ -1.32
VCAN-202ENST00000342785 SAP130Q9H0E3 1048 aa6.8□□□□□ -1.32
VCAN-202ENST00000342785 DZANK1Q9NVP4 752 aa6.8□□□□□ -1.32
VCAN-202ENST00000342785 TMEM202A6NGA9 273 aa6.8□□□□□ -1.32
VCAN-202ENST00000342785 ANKRD28O15084 1053 aa6.8□□□□□ -1.32
VCAN-202ENST00000342785 KCNJ13O60928 360 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms