RNA–Protein interactions for RNA: ENST00000340477.9

SYNE4-202, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE4, Length 1,004 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-202ENST00000340477 PER3P56645 1201 aa17.66■□□□□ 0.42
SYNE4-202ENST00000340477 PPIAP62937 165 aaKnown RBP17.66■□□□□ 0.42
SYNE4-202ENST00000340477 MRPS22P82650 360 aaKnown RBP17.66■□□□□ 0.42
SYNE4-202ENST00000340477 UBAP2LQ14157 1087 aaKnown RBP17.66■□□□□ 0.42
SYNE4-202ENST00000340477 PRSS53Q2L4Q9 553 aa17.66■□□□□ 0.42
SYNE4-202ENST00000340477 ZNF551Q7Z340 670 aaPredicted RBP17.66■□□□□ 0.42
SYNE4-202ENST00000340477 OR2L13Q8N349 312 aa17.66■□□□□ 0.42
SYNE4-202ENST00000340477 SIMC1Q8NDZ2 872 aa17.66■□□□□ 0.42
SYNE4-202ENST00000340477 OMA1Q96E52 524 aa17.66■□□□□ 0.42
SYNE4-202ENST00000340477 ELP4Q96EB1 424 aa17.66■□□□□ 0.42
SYNE4-202ENST00000340477 VSTM2LQ96N03 204 aa17.66■□□□□ 0.42
SYNE4-202ENST00000340477 TTTY12Q9BZ98 90 aa17.66■□□□□ 0.42
SYNE4-202ENST00000340477 METTL7AQ9H8H3 244 aa17.66■□□□□ 0.42
SYNE4-202ENST00000340477 ANKRA2Q9H9E1 313 aa17.66■□□□□ 0.42
SYNE4-202ENST00000340477 IL1RL2Q9HB29 575 aa17.66■□□□□ 0.42
SYNE4-202ENST00000340477 C3orf14Q9HBI5 128 aa17.66■□□□□ 0.42
SYNE4-202ENST00000340477 SH2D2AQ9NP31 389 aa17.66■□□□□ 0.42
SYNE4-202ENST00000340477 DEPPQ9NTK1 212 aa17.66■□□□□ 0.42
SYNE4-202ENST00000340477 SLC5A6Q9Y289 635 aa17.66■□□□□ 0.42
SYNE4-202ENST00000340477 GPR55Q9Y2T6 319 aaPredicted RBP17.66■□□□□ 0.42
SYNE4-202ENST00000340477 CHCHD2Q9Y6H1 151 aaPredicted RBP17.66■□□□□ 0.42
SYNE4-202ENST00000340477 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.66■□□□□ 0.42
SYNE4-202ENST00000340477 A0A0G2JMM0 328 aa17.65■□□□□ 0.42
SYNE4-202ENST00000340477 A0A1W2PPB8 328 aa17.65■□□□□ 0.42
SYNE4-202ENST00000340477 A0A1W2PRS3 328 aa17.65■□□□□ 0.42
SYNE4-202ENST00000340477 TTC36A6NLP5 189 aa17.65■□□□□ 0.42
SYNE4-202ENST00000340477 FAM166BA8MTA8 275 aa17.65■□□□□ 0.42
SYNE4-202ENST00000340477 KIR3DP1A8MWS1 328 aa17.65■□□□□ 0.42
SYNE4-202ENST00000340477 TO15178 435 aa17.65■□□□□ 0.42
SYNE4-202ENST00000340477 HS6ST1O60243 411 aa17.65■□□□□ 0.42
SYNE4-202ENST00000340477 CDC40O60508 579 aaKnown RBP eCLIP17.65■□□□□ 0.42
SYNE4-202ENST00000340477 ABOP16442 354 aa17.65■□□□□ 0.42
SYNE4-202ENST00000340477 SOX18P35713 384 aa17.65■□□□□ 0.42
SYNE4-202ENST00000340477 PIGAP37287 484 aa17.65■□□□□ 0.42
SYNE4-202ENST00000340477 MASP1P48740 699 aa17.65■□□□□ 0.42
SYNE4-202ENST00000340477 PPP2R2AP63151 447 aa17.65■□□□□ 0.42
SYNE4-202ENST00000340477 PRR5P85299 388 aa17.65■□□□□ 0.42
SYNE4-202ENST00000340477 OCRLQ01968 901 aa17.65■□□□□ 0.42
SYNE4-202ENST00000340477 LSM12Q3MHD2 195 aaKnown RBP17.65■□□□□ 0.42
SYNE4-202ENST00000340477 VPS26BQ4G0F5 336 aa17.65■□□□□ 0.42
SYNE4-202ENST00000340477 ZNF385BQ569K4 471 aa17.65■□□□□ 0.42
SYNE4-202ENST00000340477 NUP54Q7Z3B4 507 aa17.65■□□□□ 0.42
SYNE4-202ENST00000340477 SIAH3Q8IW03 269 aa17.65■□□□□ 0.42
SYNE4-202ENST00000340477 SLC44A2Q8IWA5 706 aaPredicted RBP17.65■□□□□ 0.42
SYNE4-202ENST00000340477 OR7A2PQ8NGA2 310 aa17.65■□□□□ 0.42
SYNE4-202ENST00000340477 CEP70Q8NHQ1 597 aa17.65■□□□□ 0.42
SYNE4-202ENST00000340477 SPPL2AQ8TCT8 520 aa17.65■□□□□ 0.42
SYNE4-202ENST00000340477 ZNF75CPQ92670 426 aaPredicted RBP17.65■□□□□ 0.42
SYNE4-202ENST00000340477 ZNF597Q96LX8 424 aa17.65■□□□□ 0.42
SYNE4-202ENST00000340477 Q9N2J8 555 aa17.65■□□□□ 0.42
SYNE4-202ENST00000340477 MRTO4Q9UKD2 239 aaKnown RBP17.65■□□□□ 0.42
SYNE4-202ENST00000340477 A0A1B0GUH1 482 aa17.64■□□□□ 0.41
SYNE4-202ENST00000340477 ANKRD33BA6NCL7 494 aa17.64■□□□□ 0.41
SYNE4-202ENST00000340477 UPK1AO00322 258 aa17.64■□□□□ 0.41
SYNE4-202ENST00000340477 REM1O75628 298 aa17.64■□□□□ 0.41
SYNE4-202ENST00000340477 FRKP42685 505 aaPredicted RBP17.64■□□□□ 0.41
SYNE4-202ENST00000340477 CLDN8P56748 225 aa17.64■□□□□ 0.41
SYNE4-202ENST00000340477 EFR3AQ14156 821 aa17.64■□□□□ 0.41
SYNE4-202ENST00000340477 C4orf17Q53FE4 359 aa17.64■□□□□ 0.41
SYNE4-202ENST00000340477 RNFT1Q5M7Z0 435 aa17.64■□□□□ 0.41
SYNE4-202ENST00000340477 TMEM198Q66K66 360 aa17.64■□□□□ 0.41
SYNE4-202ENST00000340477 PACS2Q86VP3 889 aa17.64■□□□□ 0.41
SYNE4-202ENST00000340477 FAM109AQ8N4B1 249 aa17.64■□□□□ 0.41
SYNE4-202ENST00000340477 PIWIL2Q8TC59 973 aaKnown RBP17.64■□□□□ 0.41
SYNE4-202ENST00000340477 TMBIM1Q969X1 311 aa17.64■□□□□ 0.41
SYNE4-202ENST00000340477 TMCO6Q96DC7 493 aa17.64■□□□□ 0.41
SYNE4-202ENST00000340477 JSRP1Q96MG2 331 aaPredicted RBP17.64■□□□□ 0.41
SYNE4-202ENST00000340477 COL21A1Q96P44 957 aa17.64■□□□□ 0.41
SYNE4-202ENST00000340477 MS4A4EQ96PG1 132 aa17.64■□□□□ 0.41
SYNE4-202ENST00000340477 DPY30Q9C005 99 aa17.64■□□□□ 0.41
SYNE4-202ENST00000340477 BHLHE41Q9C0J9 482 aaPredicted RBP17.64■□□□□ 0.41
SYNE4-202ENST00000340477 NEUROD4Q9HD90 331 aa17.64■□□□□ 0.41
SYNE4-202ENST00000340477 INTS9Q9NV88 658 aaKnown RBP17.64■□□□□ 0.41
SYNE4-202ENST00000340477 TUBA8Q9NY65 449 aaPredicted RBP17.64■□□□□ 0.41
SYNE4-202ENST00000340477 KLRF1Q9NZS2 232 aa17.64■□□□□ 0.41
SYNE4-202ENST00000340477 CNOT11Q9UKZ1 510 aaKnown RBP17.64■□□□□ 0.41
SYNE4-202ENST00000340477 TRGV8A0A0C4DH27 118 aa17.63■□□□□ 0.41
SYNE4-202ENST00000340477 A0A1W2PRB8 838 aa17.63■□□□□ 0.41
SYNE4-202ENST00000340477 PINLYPA6NC86 204 aa17.63■□□□□ 0.41
SYNE4-202ENST00000340477 EMC8O43402 210 aa17.63■□□□□ 0.41
SYNE4-202ENST00000340477 SLC19A2O60779 497 aa17.63■□□□□ 0.41
SYNE4-202ENST00000340477 SNX4O95219 450 aa17.63■□□□□ 0.41
SYNE4-202ENST00000340477 ABCB1P08183 1280 aaPredicted RBP17.63■□□□□ 0.41
SYNE4-202ENST00000340477 LAMP1P11279 417 aa17.63■□□□□ 0.41
SYNE4-202ENST00000340477 CLNS1AP54105 237 aaKnown RBP17.63■□□□□ 0.41
SYNE4-202ENST00000340477 PSMD4P55036 377 aaKnown RBP17.63■□□□□ 0.41
SYNE4-202ENST00000340477 CORO7P57737 925 aa17.63■□□□□ 0.41
SYNE4-202ENST00000340477 C21orf58P58505 322 aa17.63■□□□□ 0.41
SYNE4-202ENST00000340477 MLC1Q15049 377 aa17.63■□□□□ 0.41
SYNE4-202ENST00000340477 PGS1Q32NB8 556 aa17.63■□□□□ 0.41
SYNE4-202ENST00000340477 SPDYE7PQ495Y7 208 aa17.63■□□□□ 0.41
SYNE4-202ENST00000340477 NXNQ6DKJ4 435 aa17.63■□□□□ 0.41
SYNE4-202ENST00000340477 OGFOD2Q6N063 350 aa17.63■□□□□ 0.41
SYNE4-202ENST00000340477 KRTCAP2Q8N6L1 136 aa17.63■□□□□ 0.41
SYNE4-202ENST00000340477 DTNBP1Q96EV8 351 aa17.63■□□□□ 0.41
SYNE4-202ENST00000340477 RILPQ96NA2 401 aa17.63■□□□□ 0.41
SYNE4-202ENST00000340477 DUSP26Q9BV47 211 aa17.63■□□□□ 0.41
SYNE4-202ENST00000340477 ZFP64Q9NPA5 681 aa17.63■□□□□ 0.41
SYNE4-202ENST00000340477 EQTNQ9NQ60 294 aa17.63■□□□□ 0.41
SYNE4-202ENST00000340477 SUCOQ9UBS9 1254 aaKnown RBP17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms