RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 KCNK6Q9Y257 313 aa13.57□□□□□ -0.24
CPSF7-201ENST00000340437 PLXNB3Q9ULL4 1909 aa13.57□□□□□ -0.24
CPSF7-201ENST00000340437 PRUNE2Q8WUY3 3088 aa13.57□□□□□ -0.24
CPSF7-201ENST00000340437 A0A1W2PPK0 400 aa13.57□□□□□ -0.24
CPSF7-201ENST00000340437 NDUFS4O43181 175 aa13.57□□□□□ -0.24
CPSF7-201ENST00000340437 YES1P07947 543 aa13.57□□□□□ -0.24
CPSF7-201ENST00000340437 SMSP52788 366 aa13.57□□□□□ -0.24
CPSF7-201ENST00000340437 ARHGAP15Q53QZ3 475 aa13.57□□□□□ -0.24
CPSF7-201ENST00000340437 ZNF311Q5JNZ3 666 aa13.57□□□□□ -0.24
CPSF7-201ENST00000340437 OR51G2Q8NGK0 314 aa13.57□□□□□ -0.24
CPSF7-201ENST00000340437 MED20Q9H944 212 aa13.57□□□□□ -0.24
CPSF7-201ENST00000340437 CACNA1IQ9P0X4 2223 aa13.57□□□□□ -0.24
CPSF7-201ENST00000340437 SEC16AO15027 2179 aa13.57□□□□□ -0.24
CPSF7-201ENST00000340437 PLA2G10O15496 165 aa13.57□□□□□ -0.24
CPSF7-201ENST00000340437 ARHGEF9O43307 516 aa13.57□□□□□ -0.24
CPSF7-201ENST00000340437 ADH1AP07327 375 aa13.57□□□□□ -0.24
CPSF7-201ENST00000340437 KELP23276 732 aa13.57□□□□□ -0.24
CPSF7-201ENST00000340437 BSGP35613 385 aa13.57□□□□□ -0.24
CPSF7-201ENST00000340437 SMIM11AP58511 58 aa13.57□□□□□ -0.24
CPSF7-201ENST00000340437 DCDC1P59894 354 aa13.57□□□□□ -0.24
CPSF7-201ENST00000340437 C12orf73Q69YU5 71 aa13.57□□□□□ -0.24
CPSF7-201ENST00000340437 XKRXQ6PP77 449 aa13.57□□□□□ -0.24
CPSF7-201ENST00000340437 TIGD4Q8IY51 512 aa13.57□□□□□ -0.24
CPSF7-201ENST00000340437 NEIL3Q8TAT5 605 aa13.57□□□□□ -0.24
CPSF7-201ENST00000340437 PAWRQ96IZ0 340 aaKnown RBP13.57□□□□□ -0.24
CPSF7-201ENST00000340437 SIRT3Q9NTG7 399 aaPredicted RBP13.57□□□□□ -0.24
CPSF7-201ENST00000340437 CXXC1Q9P0U4 656 aaPredicted RBP13.57□□□□□ -0.24
CPSF7-201ENST00000340437 HSPB11Q9Y547 144 aa13.57□□□□□ -0.24
CPSF7-201ENST00000340437 FGBP02675 491 aa13.56□□□□□ -0.24
CPSF7-201ENST00000340437 CHRM4P08173 479 aa13.56□□□□□ -0.24
CPSF7-201ENST00000340437 MAP2K3P46734 347 aa13.56□□□□□ -0.24
CPSF7-201ENST00000340437 CCR8P51685 355 aa13.56□□□□□ -0.24
CPSF7-201ENST00000340437 ERVFC1P60507 584 aa13.56□□□□□ -0.24
CPSF7-201ENST00000340437 FAM46CQ5VWP2 391 aa13.56□□□□□ -0.24
CPSF7-201ENST00000340437 FCRLBQ6BAA4 426 aa13.56□□□□□ -0.24
CPSF7-201ENST00000340437 SLC27A4Q6P1M0 643 aa13.56□□□□□ -0.24
CPSF7-201ENST00000340437 MTFR2Q6P444 385 aa13.56□□□□□ -0.24
CPSF7-201ENST00000340437 FAM129CQ86XR2 697 aa13.56□□□□□ -0.24
CPSF7-201ENST00000340437 KIF18BQ86Y91 864 aa13.56□□□□□ -0.24
CPSF7-201ENST00000340437 SECISBP2Q96T21 854 aaKnown RBP13.56□□□□□ -0.24
CPSF7-201ENST00000340437 GALNT9Q9HCQ5 603 aa13.56□□□□□ -0.24
CPSF7-201ENST00000340437 GPR55Q9Y2T6 319 aaPredicted RBP13.56□□□□□ -0.24
CPSF7-201ENST00000340437 ALG5Q9Y673 324 aa13.56□□□□□ -0.24
CPSF7-201ENST00000340437 A0A087WUU8 490 aa13.56□□□□□ -0.24
CPSF7-201ENST00000340437 A0A0B4J293 547 aa13.56□□□□□ -0.24
CPSF7-201ENST00000340437 POLR1CO15160 346 aaPredicted RBP13.56□□□□□ -0.24
CPSF7-201ENST00000340437 FUT1P19526 365 aa13.56□□□□□ -0.24
CPSF7-201ENST00000340437 CTNNB1P35222 781 aa13.56□□□□□ -0.24
CPSF7-201ENST00000340437 CAMK1Q14012 370 aa13.56□□□□□ -0.24
CPSF7-201ENST00000340437 BTBD16Q32M84 506 aa13.56□□□□□ -0.24
CPSF7-201ENST00000340437 CCDC58Q4VC31 144 aa13.56□□□□□ -0.24
CPSF7-201ENST00000340437 KLHL22Q53GT1 634 aa13.56□□□□□ -0.24
CPSF7-201ENST00000340437 RGMAQ96B86 450 aa13.56□□□□□ -0.24
CPSF7-201ENST00000340437 C12orf66Q96MD2 445 aa13.56□□□□□ -0.24
CPSF7-201ENST00000340437 SLC38A2Q96QD8 506 aa13.56□□□□□ -0.24
CPSF7-201ENST00000340437 C19orf43Q9BQ61 176 aa13.56□□□□□ -0.24
CPSF7-201ENST00000340437 BEX1Q9HBH7 125 aa13.56□□□□□ -0.24
CPSF7-201ENST00000340437 NEUROD4Q9HD90 331 aa13.56□□□□□ -0.24
CPSF7-201ENST00000340437 KCND3Q9UK17 655 aa13.56□□□□□ -0.24
CPSF7-201ENST00000340437 ZFR2Q9UPR6 939 aaKnown RBP13.56□□□□□ -0.24
CPSF7-201ENST00000340437 TRAV6A0A075B6T7 132 aa13.55□□□□□ -0.24
CPSF7-201ENST00000340437 TBX6O95947 436 aaPredicted RBP13.55□□□□□ -0.24
CPSF7-201ENST00000340437 SOD1P00441 154 aa13.55□□□□□ -0.24
CPSF7-201ENST00000340437 NTSP30990 170 aa13.55□□□□□ -0.24
CPSF7-201ENST00000340437 STXBP1P61764 594 aaKnown RBP13.55□□□□□ -0.24
CPSF7-201ENST00000340437 MRPL28Q13084 256 aaKnown RBP13.55□□□□□ -0.24
CPSF7-201ENST00000340437 C18orf63Q68DL7 685 aa13.55□□□□□ -0.24
CPSF7-201ENST00000340437 C19orf48Q6RUI8 117 aa13.55□□□□□ -0.24
CPSF7-201ENST00000340437 OR4N5Q8IXE1 308 aa13.55□□□□□ -0.24
CPSF7-201ENST00000340437 PCNPQ8WW12 178 aaKnown RBP13.55□□□□□ -0.24
CPSF7-201ENST00000340437 SNX18Q96RF0 628 aa13.55□□□□□ -0.24
CPSF7-201ENST00000340437 PRRT4C9JH25 899 aa13.55□□□□□ -0.24
CPSF7-201ENST00000340437 EFEMP2O95967 443 aa13.55□□□□□ -0.24
CPSF7-201ENST00000340437 MRPL3P09001 348 aaKnown RBP13.55□□□□□ -0.24
CPSF7-201ENST00000340437 PIPP12273 146 aaPredicted RBP13.55□□□□□ -0.24
CPSF7-201ENST00000340437 DDX5P17844 614 aaKnown RBP13.55□□□□□ -0.24
CPSF7-201ENST00000340437 DDOSTP39656 456 aa13.55□□□□□ -0.24
CPSF7-201ENST00000340437 LIMK1P53667 647 aa13.55□□□□□ -0.24
CPSF7-201ENST00000340437 SRP54P61011 504 aaKnown RBP13.55□□□□□ -0.24
CPSF7-201ENST00000340437 CHRNEQ04844 493 aa13.55□□□□□ -0.24
CPSF7-201ENST00000340437 DHCR24Q15392 516 aa13.55□□□□□ -0.24
CPSF7-201ENST00000340437 TBC1D19Q8N5T2 526 aa13.55□□□□□ -0.24
CPSF7-201ENST00000340437 OR8D4Q8NGM9 314 aa13.55□□□□□ -0.24
CPSF7-201ENST00000340437 CXorf40AQ8TE69 158 aa13.55□□□□□ -0.24
CPSF7-201ENST00000340437 MS4A8Q9BY19 250 aa13.55□□□□□ -0.24
CPSF7-201ENST00000340437 A4GALTQ9NPC4 353 aa13.55□□□□□ -0.24
CPSF7-201ENST00000340437 MCUBQ9NWR8 336 aa13.55□□□□□ -0.24
CPSF7-201ENST00000340437 OR52A4PA6NMU1 304 aa13.55□□□□□ -0.24
CPSF7-201ENST00000340437 C16orf62Q7Z3J2 963 aa13.55□□□□□ -0.24
CPSF7-201ENST00000340437 NKAIN4Q8IVV8 208 aa13.55□□□□□ -0.24
CPSF7-201ENST00000340437 BBS10Q8TAM1 723 aa13.55□□□□□ -0.24
CPSF7-201ENST00000340437 SETD6Q8TBK2 473 aa13.55□□□□□ -0.24
CPSF7-201ENST00000340437 SPRYD4Q8WW59 207 aaPredicted RBP13.55□□□□□ -0.24
CPSF7-201ENST00000340437 SNAPC3Q92966 411 aa13.55□□□□□ -0.24
CPSF7-201ENST00000340437 ZNF624Q9P2J8 865 aaPredicted RBP13.55□□□□□ -0.24
CPSF7-201ENST00000340437 DIMT1Q9UNQ2 313 aaKnown RBP13.55□□□□□ -0.24
CPSF7-201ENST00000340437 MEN1O00255 615 aa13.54□□□□□ -0.24
CPSF7-201ENST00000340437 PIP5K1CO60331 668 aa13.54□□□□□ -0.24
CPSF7-201ENST00000340437 SLC35G4P0C7Q5 338 aa13.54□□□□□ -0.24
CPSF7-201ENST00000340437 PRKAR1AP10644 381 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms