RNA–Protein interactions for RNA: ENST00000340424.4

SIRPB3P-201, Transcript of signal regulatory protein beta 3, pseudogene, humanhuman

BASIC

Gene SIRPB3P, Length 1,216 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB3P-201ENST00000340424 FAM219BQ5XKK7 198 aa12.24□□□□□ -0.45
SIRPB3P-201ENST00000340424 KANK2Q63ZY3 851 aa12.24□□□□□ -0.45
SIRPB3P-201ENST00000340424 HIST2H2BCQ6DN03 193 aa12.24□□□□□ -0.45
SIRPB3P-201ENST00000340424 CLEC6AQ6EIG7 209 aa12.24□□□□□ -0.45
SIRPB3P-201ENST00000340424 ACAD11Q709F0 780 aa12.24□□□□□ -0.45
SIRPB3P-201ENST00000340424 CROCCP2Q86T23 111 aa12.24□□□□□ -0.45
SIRPB3P-201ENST00000340424 OR5M3Q8NGP4 307 aa12.24□□□□□ -0.45
SIRPB3P-201ENST00000340424 OR9A2Q8NGT5 310 aa12.24□□□□□ -0.45
SIRPB3P-201ENST00000340424 TCP10LQ8TDR4 215 aa12.24□□□□□ -0.45
SIRPB3P-201ENST00000340424 DTNBP1Q96EV8 351 aa12.24□□□□□ -0.45
SIRPB3P-201ENST00000340424 TMEM41AQ96HV5 264 aa12.24□□□□□ -0.45
SIRPB3P-201ENST00000340424 RILPQ96NA2 401 aa12.24□□□□□ -0.45
SIRPB3P-201ENST00000340424 BBS4Q96RK4 519 aa12.24□□□□□ -0.45
SIRPB3P-201ENST00000340424 CCT7Q99832 543 aa12.24□□□□□ -0.45
SIRPB3P-201ENST00000340424 ITPAQ9BY32 194 aa12.24□□□□□ -0.45
SIRPB3P-201ENST00000340424 LDAHQ9H6V9 325 aa12.24□□□□□ -0.45
SIRPB3P-201ENST00000340424 LRTM1Q9HBL6 345 aa12.24□□□□□ -0.45
SIRPB3P-201ENST00000340424 PROK2Q9HC23 129 aa12.24□□□□□ -0.45
SIRPB3P-201ENST00000340424 TAS2R9Q9NYW1 312 aa12.24□□□□□ -0.45
SIRPB3P-201ENST00000340424 DTX4Q9Y2E6 619 aa12.24□□□□□ -0.45
SIRPB3P-201ENST00000340424 A0A087WV62 115 aa12.23□□□□□ -0.45
SIRPB3P-201ENST00000340424 TRGV5A0A0B4J1U4 118 aa12.23□□□□□ -0.45
SIRPB3P-201ENST00000340424 ATP6AP2A0A1C7CYW4 349 aa12.23□□□□□ -0.45
SIRPB3P-201ENST00000340424 OR6C70A6NIJ9 312 aa12.23□□□□□ -0.45
SIRPB3P-201ENST00000340424 LRRC3CA6NJW4 275 aa12.23□□□□□ -0.45
SIRPB3P-201ENST00000340424 FAM47E-STBD1D6RA91 191 aa12.23□□□□□ -0.45
SIRPB3P-201ENST00000340424 WDR1O75083 606 aa12.23□□□□□ -0.45
SIRPB3P-201ENST00000340424 ATP6AP2O75787 350 aa12.23□□□□□ -0.45
SIRPB3P-201ENST00000340424 ABCB1P08183 1280 aaPredicted RBP12.23□□□□□ -0.45
SIRPB3P-201ENST00000340424 COL8A1P27658 744 aa12.23□□□□□ -0.45
SIRPB3P-201ENST00000340424 HTR1EP28566 365 aa12.23□□□□□ -0.45
SIRPB3P-201ENST00000340424 SOX18P35713 384 aa12.23□□□□□ -0.45
SIRPB3P-201ENST00000340424 CASP3P42574 277 aa12.23□□□□□ -0.45
SIRPB3P-201ENST00000340424 MASP1P48740 699 aa12.23□□□□□ -0.45
SIRPB3P-201ENST00000340424 MRPS22P82650 360 aaKnown RBP12.23□□□□□ -0.45
SIRPB3P-201ENST00000340424 MRPS35P82673 323 aaKnown RBP12.23□□□□□ -0.45
SIRPB3P-201ENST00000340424 GUCA2AQ02747 115 aa12.23□□□□□ -0.45
SIRPB3P-201ENST00000340424 DUSP8Q13202 625 aa12.23□□□□□ -0.45
SIRPB3P-201ENST00000340424 KIAA0040Q15053 153 aa12.23□□□□□ -0.45
SIRPB3P-201ENST00000340424 LTB4RQ15722 352 aa12.23□□□□□ -0.45
SIRPB3P-201ENST00000340424 ZNF787Q6DD87 383 aa12.23□□□□□ -0.45
SIRPB3P-201ENST00000340424 SLC30A6Q6NXT4 461 aa12.23□□□□□ -0.45
SIRPB3P-201ENST00000340424 BLOC1S3Q6QNY0 202 aa12.23□□□□□ -0.45
SIRPB3P-201ENST00000340424 TICAM1Q8IUC6 712 aa12.23□□□□□ -0.45
SIRPB3P-201ENST00000340424 CLYBLQ8N0X4 340 aa12.23□□□□□ -0.45
SIRPB3P-201ENST00000340424 CDC26Q8NHZ8 85 aa12.23□□□□□ -0.45
SIRPB3P-201ENST00000340424 ASB5Q8WWX0 329 aa12.23□□□□□ -0.45
SIRPB3P-201ENST00000340424 TMCO6Q96DC7 493 aa12.23□□□□□ -0.45
SIRPB3P-201ENST00000340424 OMA1Q96E52 524 aa12.23□□□□□ -0.45
SIRPB3P-201ENST00000340424 FCRL1Q96LA6 429 aa12.23□□□□□ -0.45
SIRPB3P-201ENST00000340424 METTL7AQ9H8H3 244 aa12.23□□□□□ -0.45
SIRPB3P-201ENST00000340424 SSU72Q9NP77 194 aaKnown RBP12.23□□□□□ -0.45
SIRPB3P-201ENST00000340424 TNFRSF12AQ9NP84 129 aa12.23□□□□□ -0.45
SIRPB3P-201ENST00000340424 SLC17A7Q9P2U7 560 aa12.23□□□□□ -0.45
SIRPB3P-201ENST00000340424 GPR55Q9Y2T6 319 aaPredicted RBP12.23□□□□□ -0.45
SIRPB3P-201ENST00000340424 POLR3HQ9Y535 204 aaPredicted RBP12.23□□□□□ -0.45
SIRPB3P-201ENST00000340424 DNAJC15Q9Y5T4 150 aa12.23□□□□□ -0.45
SIRPB3P-201ENST00000340424 EML6Q6ZMW3 1958 aa12.22□□□□□ -0.45
SIRPB3P-201ENST00000340424 EXPH5Q8NEV8 1989 aa12.22□□□□□ -0.45
SIRPB3P-201ENST00000340424 NPIPA2E9PIF3 369 aa12.22□□□□□ -0.45
SIRPB3P-201ENST00000340424 NPIPA3F8WFD2 350 aa12.22□□□□□ -0.45
SIRPB3P-201ENST00000340424 PLOD2O00469 737 aa12.22□□□□□ -0.45
SIRPB3P-201ENST00000340424 TYROBPO43914 113 aa12.22□□□□□ -0.45
SIRPB3P-201ENST00000340424 ERN1O75460 977 aaKnown RBP12.22□□□□□ -0.45
SIRPB3P-201ENST00000340424 SNUPNO95149 360 aaKnown RBP12.22□□□□□ -0.45
SIRPB3P-201ENST00000340424 GABRA1P14867 456 aa12.22□□□□□ -0.45
SIRPB3P-201ENST00000340424 ACVR2AP27037 513 aa12.22□□□□□ -0.45
SIRPB3P-201ENST00000340424 PTGER4P35408 488 aa12.22□□□□□ -0.45
SIRPB3P-201ENST00000340424 NCBP2P52298 156 aaKnown RBP eCLIP12.22□□□□□ -0.45
SIRPB3P-201ENST00000340424 EFR3AQ14156 821 aa12.22□□□□□ -0.45
SIRPB3P-201ENST00000340424 KRT71Q3SY84 523 aa12.22□□□□□ -0.45
SIRPB3P-201ENST00000340424 GXYLT1Q4G148 440 aa12.22□□□□□ -0.45
SIRPB3P-201ENST00000340424 ARL13AQ5H913 290 aaPredicted RBP12.22□□□□□ -0.45
SIRPB3P-201ENST00000340424 WLSQ5T9L3 541 aa12.22□□□□□ -0.45
SIRPB3P-201ENST00000340424 SP5Q6BEB4 398 aaPredicted RBP12.22□□□□□ -0.45
SIRPB3P-201ENST00000340424 FAM180BQ6P0A1 224 aa12.22□□□□□ -0.45
SIRPB3P-201ENST00000340424 TMEM64Q6YI46 380 aa12.22□□□□□ -0.45
SIRPB3P-201ENST00000340424 LIX1Q8N485 282 aa12.22□□□□□ -0.45
SIRPB3P-201ENST00000340424 NEIL3Q8TAT5 605 aa12.22□□□□□ -0.45
SIRPB3P-201ENST00000340424 CA5BP1Q8WTZ4 195 aa12.22□□□□□ -0.45
SIRPB3P-201ENST00000340424 RND1Q92730 232 aa12.22□□□□□ -0.45
SIRPB3P-201ENST00000340424 NTNG2Q96CW9 530 aa12.22□□□□□ -0.45
SIRPB3P-201ENST00000340424 SLC35A4Q96G79 324 aa12.22□□□□□ -0.45
SIRPB3P-201ENST00000340424 JSRP1Q96MG2 331 aaPredicted RBP12.22□□□□□ -0.45
SIRPB3P-201ENST00000340424 VSTM2LQ96N03 204 aa12.22□□□□□ -0.45
SIRPB3P-201ENST00000340424 EXO5Q9H790 373 aa12.22□□□□□ -0.45
SIRPB3P-201ENST00000340424 ACAD8Q9UKU7 415 aa12.22□□□□□ -0.45
SIRPB3P-201ENST00000340424 TRAF6Q9Y4K3 522 aa12.22□□□□□ -0.45
SIRPB3P-201ENST00000340424 ZNF407Q9C0G0 2248 aa12.21□□□□□ -0.45
SIRPB3P-201ENST00000340424 ADGRG4Q8IZF6 3080 aa12.21□□□□□ -0.45
SIRPB3P-201ENST00000340424 TTC36A6NLP5 189 aa12.21□□□□□ -0.45
SIRPB3P-201ENST00000340424 TMEM114B3SHH9 223 aa12.21□□□□□ -0.45
SIRPB3P-201ENST00000340424 LSM1O15116 133 aaKnown RBP12.21□□□□□ -0.45
SIRPB3P-201ENST00000340424 RGS16O15492 202 aaPredicted RBP12.21□□□□□ -0.45
SIRPB3P-201ENST00000340424 TBX19O60806 448 aa12.21□□□□□ -0.45
SIRPB3P-201ENST00000340424 SPAG7O75391 227 aa12.21□□□□□ -0.45
SIRPB3P-201ENST00000340424 HPNP05981 417 aa12.21□□□□□ -0.45
SIRPB3P-201ENST00000340424 BPGMP07738 259 aa12.21□□□□□ -0.45
SIRPB3P-201ENST00000340424 CELA3AP09093 270 aa12.21□□□□□ -0.45
SIRPB3P-201ENST00000340424 RFPL3SP0C7P2 107 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms