RNA–Protein interactions for RNA: ENST00000340384.4

TUBB4B-201, Transcript of tubulin beta 4B class IVb, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB4B, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4B-201ENST00000340384 PVRP15151 417 aa14.24□□□□□ -0.13
TUBB4B-201ENST00000340384 MAPK10P53779 464 aa14.24□□□□□ -0.13
TUBB4B-201ENST00000340384 LIM2P55344 173 aa14.24□□□□□ -0.13
TUBB4B-201ENST00000340384 CSNK2BP67870 215 aa14.24□□□□□ -0.13
TUBB4B-201ENST00000340384 CD47Q08722 323 aa14.24□□□□□ -0.13
TUBB4B-201ENST00000340384 NPRL3Q12980 569 aa14.24□□□□□ -0.13
TUBB4B-201ENST00000340384 LAPTM4AQ15012 233 aa14.24□□□□□ -0.13
TUBB4B-201ENST00000340384 TRIP6Q15654 476 aaKnown RBP14.24□□□□□ -0.13
TUBB4B-201ENST00000340384 EXOC3L2Q2M3D2 409 aa14.24□□□□□ -0.13
TUBB4B-201ENST00000340384 DEFB134Q4QY38 66 aa14.24□□□□□ -0.13
TUBB4B-201ENST00000340384 COLEC12Q5KU26 742 aa14.24□□□□□ -0.13
TUBB4B-201ENST00000340384 ANKRD34AQ69YU3 496 aa14.24□□□□□ -0.13
TUBB4B-201ENST00000340384 TSEN54Q7Z6J9 526 aaKnown RBP14.24□□□□□ -0.13
TUBB4B-201ENST00000340384 GLRX5Q86SX6 157 aa14.24□□□□□ -0.13
TUBB4B-201ENST00000340384 ZNF605Q86T29 641 aa14.24□□□□□ -0.13
TUBB4B-201ENST00000340384 SLCO6A1Q86UG4 719 aa14.24□□□□□ -0.13
TUBB4B-201ENST00000340384 CSNK1A1LQ8N752 337 aa14.24□□□□□ -0.13
TUBB4B-201ENST00000340384 NR4A3Q92570 626 aa14.24□□□□□ -0.13
TUBB4B-201ENST00000340384 COL21A1Q96P44 957 aa14.24□□□□□ -0.13
TUBB4B-201ENST00000340384 MAP3K3Q99759 626 aa14.24□□□□□ -0.13
TUBB4B-201ENST00000340384 TREX2Q9BQ50 279 aaPredicted RBP14.24□□□□□ -0.13
TUBB4B-201ENST00000340384 SERHL2Q9H4I8 314 aa14.24□□□□□ -0.13
TUBB4B-201ENST00000340384 CACYBPQ9HB71 228 aaKnown RBP14.24□□□□□ -0.13
TUBB4B-201ENST00000340384 KCMF1Q9P0J7 381 aa14.24□□□□□ -0.13
TUBB4B-201ENST00000340384 NDRG4Q9ULP0 352 aaKnown RBP14.24□□□□□ -0.13
TUBB4B-201ENST00000340384 SLC9A8Q9Y2E8 581 aa14.24□□□□□ -0.13
TUBB4B-201ENST00000340384 SLC22A7Q9Y694 548 aa14.24□□□□□ -0.13
TUBB4B-201ENST00000340384 CEPT1Q9Y6K0 416 aa14.24□□□□□ -0.13
TUBB4B-201ENST00000340384 COL27A1Q8IZC6 1860 aaPredicted RBP14.24□□□□□ -0.13
TUBB4B-201ENST00000340384 MRPS14O60783 128 aaKnown RBP14.23□□□□□ -0.13
TUBB4B-201ENST00000340384 DKK1O94907 266 aa14.23□□□□□ -0.13
TUBB4B-201ENST00000340384 OXSR1O95747 527 aaPredicted RBP14.23□□□□□ -0.13
TUBB4B-201ENST00000340384 IFI6P09912 130 aa14.23□□□□□ -0.13
TUBB4B-201ENST00000340384 C8orf89P0DMQ9 161 aa14.23□□□□□ -0.13
TUBB4B-201ENST00000340384 JUNBP17275 347 aaPredicted RBP14.23□□□□□ -0.13
TUBB4B-201ENST00000340384 TNFRSF1BP20333 461 aa14.23□□□□□ -0.13
TUBB4B-201ENST00000340384 RAPSNQ13702 412 aa14.23□□□□□ -0.13
TUBB4B-201ENST00000340384 LASP1Q14847 261 aaKnown RBP14.23□□□□□ -0.13
TUBB4B-201ENST00000340384 MEP1AQ16819 746 aa14.23□□□□□ -0.13
TUBB4B-201ENST00000340384 WDR74Q6RFH5 385 aaPredicted RBP14.23□□□□□ -0.13
TUBB4B-201ENST00000340384 KCTD8Q6ZWB6 473 aa14.23□□□□□ -0.13
TUBB4B-201ENST00000340384 C10orf90Q96M02 699 aa14.23□□□□□ -0.13
TUBB4B-201ENST00000340384 TGM7Q96PF1 710 aa14.23□□□□□ -0.13
TUBB4B-201ENST00000340384 MS4A4EQ96PG1 132 aa14.23□□□□□ -0.13
TUBB4B-201ENST00000340384 CDC6Q99741 560 aa14.23□□□□□ -0.13
TUBB4B-201ENST00000340384 ACTRT3Q9BYD9 372 aa14.23□□□□□ -0.13
TUBB4B-201ENST00000340384 KLHL25Q9H0H3 589 aa14.23□□□□□ -0.13
TUBB4B-201ENST00000340384 POLR1BQ9H9Y6 1135 aa14.23□□□□□ -0.13
TUBB4B-201ENST00000340384 NTMQ9P121 344 aa14.23□□□□□ -0.13
TUBB4B-201ENST00000340384 PTGFRNQ9P2B2 879 aa14.23□□□□□ -0.13
TUBB4B-201ENST00000340384 KCND3Q9UK17 655 aa14.23□□□□□ -0.13
TUBB4B-201ENST00000340384 IGHV5-51A0A0C4DH38 117 aa14.23□□□□□ -0.13
TUBB4B-201ENST00000340384 SLC1A7O00341 560 aa14.23□□□□□ -0.13
TUBB4B-201ENST00000340384 HCRTR1O43613 425 aa14.23□□□□□ -0.13
TUBB4B-201ENST00000340384 DUX1O43812 170 aa14.23□□□□□ -0.13
TUBB4B-201ENST00000340384 NOL3O60936 208 aaKnown RBP14.23□□□□□ -0.13
TUBB4B-201ENST00000340384 ANGPTL1O95841 491 aa14.23□□□□□ -0.13
TUBB4B-201ENST00000340384 EIF2S1P05198 315 aaKnown RBP14.23□□□□□ -0.13
TUBB4B-201ENST00000340384 ST6GAL1P15907 406 aa14.23□□□□□ -0.13
TUBB4B-201ENST00000340384 IL7RP16871 459 aa14.23□□□□□ -0.13
TUBB4B-201ENST00000340384 CDH3P22223 829 aa14.23□□□□□ -0.13
TUBB4B-201ENST00000340384 MC3RP41968 323 aa14.23□□□□□ -0.13
TUBB4B-201ENST00000340384 CLK3P49761 638 aaKnown RBP14.23□□□□□ -0.13
TUBB4B-201ENST00000340384 XKP51811 444 aa14.23□□□□□ -0.13
TUBB4B-201ENST00000340384 PDX1P52945 283 aa14.23□□□□□ -0.13
TUBB4B-201ENST00000340384 CLDN6P56747 220 aa14.23□□□□□ -0.13
TUBB4B-201ENST00000340384 HPCAP84074 193 aa14.23□□□□□ -0.13
TUBB4B-201ENST00000340384 CDK5R2Q13319 367 aa14.23□□□□□ -0.13
TUBB4B-201ENST00000340384 TUBA3CQ13748 450 aa14.23□□□□□ -0.13
TUBB4B-201ENST00000340384 GPR19Q15760 415 aa14.23□□□□□ -0.13
TUBB4B-201ENST00000340384 SYPL1Q16563 259 aa14.23□□□□□ -0.13
TUBB4B-201ENST00000340384 DUSP7Q16829 419 aa14.23□□□□□ -0.13
TUBB4B-201ENST00000340384 GPAT3Q53EU6 434 aa14.23□□□□□ -0.13
TUBB4B-201ENST00000340384 FRMPD2BQ6IN97 320 aa14.23□□□□□ -0.13
TUBB4B-201ENST00000340384 DEPDC4Q8N2C3 294 aa14.23□□□□□ -0.13
TUBB4B-201ENST00000340384 LINC00471Q8N535 108 aa14.23□□□□□ -0.13
TUBB4B-201ENST00000340384 OR5D16Q8NGK9 328 aa14.23□□□□□ -0.13
TUBB4B-201ENST00000340384 OR9A2Q8NGT5 310 aa14.23□□□□□ -0.13
TUBB4B-201ENST00000340384 ZNF420Q8TAQ5 688 aaPredicted RBP14.23□□□□□ -0.13
TUBB4B-201ENST00000340384 HRASLS5Q96KN8 279 aa14.23□□□□□ -0.13
TUBB4B-201ENST00000340384 ALPK1Q96QP1 1244 aa14.23□□□□□ -0.13
TUBB4B-201ENST00000340384 FEVQ99581 238 aa14.23□□□□□ -0.13
TUBB4B-201ENST00000340384 CCNB1IP1Q9NPC3 277 aa14.23□□□□□ -0.13
TUBB4B-201ENST00000340384 ACER3Q9NUN7 267 aa14.23□□□□□ -0.13
TUBB4B-201ENST00000340384 SEMA5BQ9P283 1151 aa14.23□□□□□ -0.13
TUBB4B-201ENST00000340384 SLC13A4Q9UKG4 626 aa14.23□□□□□ -0.13
TUBB4B-201ENST00000340384 MN1Q10571 1320 aaPredicted RBP14.22□□□□□ -0.13
TUBB4B-201ENST00000340384 UNC13CQ8NB66 2214 aa14.22□□□□□ -0.13
TUBB4B-201ENST00000340384 LOC105369274A0A096LPK9 316 aa14.22□□□□□ -0.13
TUBB4B-201ENST00000340384 LOC102723532A0A0G2JNH3 316 aa14.22□□□□□ -0.13
TUBB4B-201ENST00000340384 SPAARA0A1B0GVQ0 90 aa14.22□□□□□ -0.13
TUBB4B-201ENST00000340384 SLC30A4O14863 429 aa14.22□□□□□ -0.13
TUBB4B-201ENST00000340384 CPNE6O95741 557 aa14.22□□□□□ -0.13
TUBB4B-201ENST00000340384 CYP4B1P13584 511 aa14.22□□□□□ -0.13
TUBB4B-201ENST00000340384 PORP16435 677 aaPredicted RBP14.22□□□□□ -0.13
TUBB4B-201ENST00000340384 LIMS1P48059 325 aa14.22□□□□□ -0.13
TUBB4B-201ENST00000340384 RUNX2Q13950 521 aa14.22□□□□□ -0.13
TUBB4B-201ENST00000340384 MAPK11Q15759 364 aa14.22□□□□□ -0.13
TUBB4B-201ENST00000340384 TMEM71Q6P5X7 295 aa14.22□□□□□ -0.13
TUBB4B-201ENST00000340384 C16orf62Q7Z3J2 963 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms