RNA–Protein interactions for RNA: ENST00000339350.7

DFFB-202, Transcript of DNA fragmentation factor subunit beta, humanhuman

TSL 1 (best)

Gene DFFB, Length 3,005 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFB-202ENST00000339350 EMC7Q9NPA0 242 aa11.94□□□□□ -0.5
DFFB-202ENST00000339350 EQTNQ9NQ60 294 aa11.94□□□□□ -0.5
DFFB-202ENST00000339350 CRLS1Q9UJA2 301 aa11.94□□□□□ -0.5
DFFB-202ENST00000339350 FAM220BPB1ANY3 271 aa11.93□□□□□ -0.5
DFFB-202ENST00000339350 STK16O75716 305 aa11.93□□□□□ -0.5
DFFB-202ENST00000339350 GADD45GO95257 159 aa11.93□□□□□ -0.5
DFFB-202ENST00000339350 ZNF7P17097 686 aaPredicted RBP11.93□□□□□ -0.5
DFFB-202ENST00000339350 SDC1P18827 310 aa11.93□□□□□ -0.5
DFFB-202ENST00000339350 STOMP27105 288 aa11.93□□□□□ -0.5
DFFB-202ENST00000339350 SLC11A2P49281 568 aa11.93□□□□□ -0.5
DFFB-202ENST00000339350 RGS4P49798 205 aa11.93□□□□□ -0.5
DFFB-202ENST00000339350 GNG10P50151 68 aa11.93□□□□□ -0.5
DFFB-202ENST00000339350 CDH4P55283 916 aa11.93□□□□□ -0.5
DFFB-202ENST00000339350 MAZP56270 477 aaKnown RBP11.93□□□□□ -0.5
DFFB-202ENST00000339350 SREBF2Q12772 1141 aa11.93□□□□□ -0.5
DFFB-202ENST00000339350 SGCGQ13326 291 aa11.93□□□□□ -0.5
DFFB-202ENST00000339350 DOC2BQ14184 412 aa11.93□□□□□ -0.5
DFFB-202ENST00000339350 PON3Q15166 354 aa11.93□□□□□ -0.5
DFFB-202ENST00000339350 CHRNA6Q15825 494 aa11.93□□□□□ -0.5
DFFB-202ENST00000339350 ALKAL2Q6UX46 152 aa11.93□□□□□ -0.5
DFFB-202ENST00000339350 C3P1Q6ZMU1 363 aa11.93□□□□□ -0.5
DFFB-202ENST00000339350 RFLNAQ6ZTI6 216 aa11.93□□□□□ -0.5
DFFB-202ENST00000339350 TSPAN33Q86UF1 283 aa11.93□□□□□ -0.5
DFFB-202ENST00000339350 FTMTQ8N4E7 242 aa11.93□□□□□ -0.5
DFFB-202ENST00000339350 TMEM145Q8NBT3 493 aa11.93□□□□□ -0.5
DFFB-202ENST00000339350 C11orf65Q8NCR3 313 aa11.93□□□□□ -0.5
DFFB-202ENST00000339350 SLC38A2Q96QD8 506 aa11.93□□□□□ -0.5
DFFB-202ENST00000339350 PSORS1C1Q9UIG5 152 aa11.93□□□□□ -0.5
DFFB-202ENST00000339350 CLCA2Q9UQC9 943 aa11.93□□□□□ -0.5
DFFB-202ENST00000339350 OARD1Q9Y530 152 aa11.93□□□□□ -0.5
DFFB-202ENST00000339350 PCDHGA6Q9Y5G7 932 aa11.93□□□□□ -0.5
DFFB-202ENST00000339350 PCDHGA5Q9Y5G8 931 aa11.93□□□□□ -0.5
DFFB-202ENST00000339350 PCDHGA1Q9Y5H4 931 aa11.93□□□□□ -0.5
DFFB-202ENST00000339350 TUBAL3A6NHL2 446 aa11.93□□□□□ -0.5
DFFB-202ENST00000339350 ZNF729A6NN14 1252 aaPredicted RBP11.93□□□□□ -0.5
DFFB-202ENST00000339350 GAPDHSO14556 408 aaPredicted RBP11.93□□□□□ -0.5
DFFB-202ENST00000339350 SCAMP2O15127 329 aaKnown RBP11.93□□□□□ -0.5
DFFB-202ENST00000339350 C9P02748 559 aa11.93□□□□□ -0.5
DFFB-202ENST00000339350 FABP3P05413 133 aa11.93□□□□□ -0.5
DFFB-202ENST00000339350 PVALBP20472 110 aaPredicted RBP11.93□□□□□ -0.5
DFFB-202ENST00000339350 IDH2P48735 452 aaKnown RBP11.93□□□□□ -0.5
DFFB-202ENST00000339350 CAMK2DQ13557 499 aa11.93□□□□□ -0.5
DFFB-202ENST00000339350 SNTB1Q13884 538 aaKnown RBP11.93□□□□□ -0.5
DFFB-202ENST00000339350 TCTN1Q2MV58 587 aa11.93□□□□□ -0.5
DFFB-202ENST00000339350 ATG9BQ674R7 924 aa11.93□□□□□ -0.5
DFFB-202ENST00000339350 NUDT18Q6ZVK8 323 aa11.93□□□□□ -0.5
DFFB-202ENST00000339350 ATCAYQ86WG3 371 aa11.93□□□□□ -0.5
DFFB-202ENST00000339350 CALHM3Q86XJ0 350 aa11.93□□□□□ -0.5
DFFB-202ENST00000339350 ZBTB2Q8N680 514 aa11.93□□□□□ -0.5
DFFB-202ENST00000339350 WFDC5Q8TCV5 224 aa11.93□□□□□ -0.5
DFFB-202ENST00000339350 FOLH1BQ9HBA9 442 aa11.93□□□□□ -0.5
DFFB-202ENST00000339350 TMEM184CQ9NVA4 438 aa11.93□□□□□ -0.5
DFFB-202ENST00000339350 BTNL2Q9UIR0 455 aa11.93□□□□□ -0.5
DFFB-202ENST00000339350 SSR3Q9UNL2 185 aa11.93□□□□□ -0.5
DFFB-202ENST00000339350 SPTBN5Q9NRC6 3674 aaKnown RBP11.93□□□□□ -0.5
DFFB-202ENST00000339350 MYO15AQ9UKN7 3530 aa11.92□□□□□ -0.5
DFFB-202ENST00000339350 GLYATL1P3A0A0U1RQE8 302 aa11.92□□□□□ -0.5
DFFB-202ENST00000339350 CLIC1O00299 241 aa11.92□□□□□ -0.5
DFFB-202ENST00000339350 COCHO43405 550 aa11.92□□□□□ -0.5
DFFB-202ENST00000339350 SMAD6O43541 496 aaKnown RBP11.92□□□□□ -0.5
DFFB-202ENST00000339350 EPORP19235 508 aa11.92□□□□□ -0.5
DFFB-202ENST00000339350 PTPN6P29350 595 aa11.92□□□□□ -0.5
DFFB-202ENST00000339350 EIF2S3P41091 472 aaKnown RBP11.92□□□□□ -0.5
DFFB-202ENST00000339350 INPP1P49441 399 aa11.92□□□□□ -0.5
DFFB-202ENST00000339350 ATP12AP54707 1039 aa11.92□□□□□ -0.5
DFFB-202ENST00000339350 CCL23P55773 120 aa11.92□□□□□ -0.5
DFFB-202ENST00000339350 MAD2L1Q13257 205 aaPredicted RBP11.92□□□□□ -0.5
DFFB-202ENST00000339350 PUM1Q14671 1186 aaKnown RBP eCLIP11.92□□□□□ -0.5
DFFB-202ENST00000339350 TIMM50Q3ZCQ8 353 aa11.92□□□□□ -0.5
DFFB-202ENST00000339350 CRELD1Q96HD1 420 aa11.92□□□□□ -0.5
DFFB-202ENST00000339350 MGLLQ99685 303 aa11.92□□□□□ -0.5
DFFB-202ENST00000339350 CPEB1Q9BZB8 566 aaKnown RBP11.92□□□□□ -0.5
DFFB-202ENST00000339350 IL26Q9NPH9 171 aa11.92□□□□□ -0.5
DFFB-202ENST00000339350 B3GAT2Q9NPZ5 323 aa11.92□□□□□ -0.5
DFFB-202ENST00000339350 GHRLQ9UBU3 117 aa11.92□□□□□ -0.5
DFFB-202ENST00000339350 CDH10Q9Y6N8 788 aa11.92□□□□□ -0.5
DFFB-202ENST00000339350 SLC38A8A6NNN8 435 aa11.92□□□□□ -0.5
DFFB-202ENST00000339350 MTX2O75431 263 aa11.92□□□□□ -0.5
DFFB-202ENST00000339350 CLDN9O95484 217 aa11.92□□□□□ -0.5
DFFB-202ENST00000339350 AGR2O95994 175 aa11.92□□□□□ -0.5
DFFB-202ENST00000339350 RFC3P40938 356 aa11.92□□□□□ -0.5
DFFB-202ENST00000339350 PTGFRP43088 359 aa11.92□□□□□ -0.5
DFFB-202ENST00000339350 RPIAP49247 311 aa11.92□□□□□ -0.5
DFFB-202ENST00000339350 PSMD4P55036 377 aaKnown RBP11.92□□□□□ -0.5
DFFB-202ENST00000339350 SP3Q02447 781 aa11.92□□□□□ -0.5
DFFB-202ENST00000339350 OPCMLQ14982 345 aa11.92□□□□□ -0.5
DFFB-202ENST00000339350 P2RY14Q15391 338 aa11.92□□□□□ -0.5
DFFB-202ENST00000339350 SSX1Q16384 188 aa11.92□□□□□ -0.5
DFFB-202ENST00000339350 ZNF57Q68EA5 555 aaPredicted RBP11.92□□□□□ -0.5
DFFB-202ENST00000339350 HAGHLQ6PII5 290 aaPredicted RBP11.92□□□□□ -0.5
DFFB-202ENST00000339350 NCEH1Q6PIU2 408 aa11.92□□□□□ -0.5
DFFB-202ENST00000339350 TMEM107Q6UX40 140 aa11.92□□□□□ -0.5
DFFB-202ENST00000339350 SHFQ7M4L6 423 aa11.92□□□□□ -0.5
DFFB-202ENST00000339350 DEFB128Q7Z7B8 93 aa11.92□□□□□ -0.5
DFFB-202ENST00000339350 ZNF454Q8N9F8 522 aa11.92□□□□□ -0.5
DFFB-202ENST00000339350 ADAMTS19Q8TE59 1207 aa11.92□□□□□ -0.5
DFFB-202ENST00000339350 DTD1Q8TEA8 209 aa11.92□□□□□ -0.5
DFFB-202ENST00000339350 SERINC2Q96SA4 455 aa11.92□□□□□ -0.5
DFFB-202ENST00000339350 RAD18Q9NS91 495 aa11.92□□□□□ -0.5
DFFB-202ENST00000339350 NDUFAF4Q9P032 175 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms