RNA–Protein interactions for RNA: ENST00000338427.10

NUDCD3-201, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-201ENST00000338427 TBCELQ5QJ74 424 aa12.19□□□□□ -0.46
NUDCD3-201ENST00000338427 C10orf62Q5T681 223 aaPredicted RBP12.19□□□□□ -0.46
NUDCD3-201ENST00000338427 ARSKQ6UWY0 536 aa12.19□□□□□ -0.46
NUDCD3-201ENST00000338427 NPSR1Q6W5P4 371 aa12.19□□□□□ -0.46
NUDCD3-201ENST00000338427 ZZZ3Q8IYH5 903 aa12.19□□□□□ -0.46
NUDCD3-201ENST00000338427 CEP112Q8N8E3 955 aa12.19□□□□□ -0.46
NUDCD3-201ENST00000338427 OR1J4Q8NGS1 313 aa12.19□□□□□ -0.46
NUDCD3-201ENST00000338427 CDC26Q8NHZ8 85 aa12.19□□□□□ -0.46
NUDCD3-201ENST00000338427 ABTB1Q969K4 478 aaPredicted RBP12.19□□□□□ -0.46
NUDCD3-201ENST00000338427 MTBPQ96DY7 904 aa12.19□□□□□ -0.46
NUDCD3-201ENST00000338427 L3HYPDHQ96EM0 354 aa12.19□□□□□ -0.46
NUDCD3-201ENST00000338427 TMEM41AQ96HV5 264 aa12.19□□□□□ -0.46
NUDCD3-201ENST00000338427 TRIB1Q96RU8 372 aa12.19□□□□□ -0.46
NUDCD3-201ENST00000338427 FAIM2Q9BWQ8 316 aa12.19□□□□□ -0.46
NUDCD3-201ENST00000338427 MID1IP1Q9NPA3 183 aa12.19□□□□□ -0.46
NUDCD3-201ENST00000338427 B4GALT7Q9UBV7 327 aa12.19□□□□□ -0.46
NUDCD3-201ENST00000338427 EXO1Q9UQ84 846 aaKnown RBP12.19□□□□□ -0.46
NUDCD3-201ENST00000338427 GPR55Q9Y2T6 319 aaPredicted RBP12.19□□□□□ -0.46
NUDCD3-201ENST00000338427 L3MBTL1Q9Y468 752 aa12.19□□□□□ -0.46
NUDCD3-201ENST00000338427 CELSR1Q9NYQ6 3014 aa12.19□□□□□ -0.46
NUDCD3-201ENST00000338427 HIVEP1P15822 2718 aa12.18□□□□□ -0.46
NUDCD3-201ENST00000338427 EXPH5Q8NEV8 1989 aa12.18□□□□□ -0.46
NUDCD3-201ENST00000338427 SMIM23A6NLE4 172 aa12.18□□□□□ -0.46
NUDCD3-201ENST00000338427 ANXA4P09525 319 aaPredicted RBP12.18□□□□□ -0.46
NUDCD3-201ENST00000338427 NAGAP17050 411 aa12.18□□□□□ -0.46
NUDCD3-201ENST00000338427 ZNF136P52737 540 aa12.18□□□□□ -0.46
NUDCD3-201ENST00000338427 SRYQ05066 204 aa12.18□□□□□ -0.46
NUDCD3-201ENST00000338427 ACSM2AQ08AH3 577 aa12.18□□□□□ -0.46
NUDCD3-201ENST00000338427 CSTF3Q12996 717 aaKnown RBP12.18□□□□□ -0.46
NUDCD3-201ENST00000338427 SPDYAQ5MJ70 313 aa12.18□□□□□ -0.46
NUDCD3-201ENST00000338427 ACSM2BQ68CK6 577 aa12.18□□□□□ -0.46
NUDCD3-201ENST00000338427 CLYBLQ8N0X4 340 aa12.18□□□□□ -0.46
NUDCD3-201ENST00000338427 C17orf47Q8NEP4 570 aa12.18□□□□□ -0.46
NUDCD3-201ENST00000338427 OR7G2Q8NG99 324 aa12.18□□□□□ -0.46
NUDCD3-201ENST00000338427 HSPBAP1Q96EW2 488 aa12.18□□□□□ -0.46
NUDCD3-201ENST00000338427 C11orf24Q96F05 449 aaPredicted RBP12.18□□□□□ -0.46
NUDCD3-201ENST00000338427 ADOQ96SZ5 270 aa12.18□□□□□ -0.46
NUDCD3-201ENST00000338427 SECISBP2Q96T21 854 aaKnown RBP12.18□□□□□ -0.46
NUDCD3-201ENST00000338427 FBXL2Q9UKC9 423 aa12.18□□□□□ -0.46
NUDCD3-201ENST00000338427 PCNX3Q9H6A9 2034 aa12.18□□□□□ -0.46
NUDCD3-201ENST00000338427 F8P00451 2351 aa12.17□□□□□ -0.46
NUDCD3-201ENST00000338427 HSPB2A8KAH6 182 aa12.17□□□□□ -0.46
NUDCD3-201ENST00000338427 SYT5O00445 386 aa12.17□□□□□ -0.46
NUDCD3-201ENST00000338427 SNPHO15079 494 aa12.17□□□□□ -0.46
NUDCD3-201ENST00000338427 TSPAN2O60636 221 aa12.17□□□□□ -0.46
NUDCD3-201ENST00000338427 PROCP04070 461 aa12.17□□□□□ -0.46
NUDCD3-201ENST00000338427 JUNP05412 331 aaKnown RBP12.17□□□□□ -0.46
NUDCD3-201ENST00000338427 HSD3B1P14060 373 aa12.17□□□□□ -0.46
NUDCD3-201ENST00000338427 DRD2P14416 443 aa12.17□□□□□ -0.46
NUDCD3-201ENST00000338427 HSD3B2P26439 372 aa12.17□□□□□ -0.46
NUDCD3-201ENST00000338427 TIA1P31483 386 aaKnown RBP eCLIP12.17□□□□□ -0.46
NUDCD3-201ENST00000338427 TMED10P49755 219 aaKnown RBP12.17□□□□□ -0.46
NUDCD3-201ENST00000338427 PKNOX1P55347 436 aa12.17□□□□□ -0.46
NUDCD3-201ENST00000338427 FOXF2Q12947 444 aa12.17□□□□□ -0.46
NUDCD3-201ENST00000338427 LCP2Q13094 533 aa12.17□□□□□ -0.46
NUDCD3-201ENST00000338427 HSPB2Q16082 182 aa12.17□□□□□ -0.46
NUDCD3-201ENST00000338427 CES4AQ5XG92 561 aa12.17□□□□□ -0.46
NUDCD3-201ENST00000338427 SLC30A6Q6NXT4 461 aa12.17□□□□□ -0.46
NUDCD3-201ENST00000338427 TMEM200AQ86VY9 491 aa12.17□□□□□ -0.46
NUDCD3-201ENST00000338427 SLC22A9Q8IVM8 553 aa12.17□□□□□ -0.46
NUDCD3-201ENST00000338427 SLC44A2Q8IWA5 706 aaPredicted RBP12.17□□□□□ -0.46
NUDCD3-201ENST00000338427 TRIM42Q8IWZ5 723 aa12.17□□□□□ -0.46
NUDCD3-201ENST00000338427 GBP7Q8N8V2 638 aaPredicted RBP12.17□□□□□ -0.46
NUDCD3-201ENST00000338427 C9orf106Q8NAJ2 232 aa12.17□□□□□ -0.46
NUDCD3-201ENST00000338427 EGLN2Q96KS0 407 aa12.17□□□□□ -0.46
NUDCD3-201ENST00000338427 OSBPL11Q9BXB4 747 aa12.17□□□□□ -0.46
NUDCD3-201ENST00000338427 PRDM14Q9GZV8 571 aa12.17□□□□□ -0.46
NUDCD3-201ENST00000338427 FOLH1BQ9HBA9 442 aa12.17□□□□□ -0.46
NUDCD3-201ENST00000338427 SLC35C2Q9NQQ7 365 aa12.17□□□□□ -0.46
NUDCD3-201ENST00000338427 KLRF1Q9NZS2 232 aa12.17□□□□□ -0.46
NUDCD3-201ENST00000338427 FLRT3Q9NZU0 649 aa12.17□□□□□ -0.46
NUDCD3-201ENST00000338427 CRIM1Q9NZV1 1036 aa12.17□□□□□ -0.46
NUDCD3-201ENST00000338427 PSMC3IPQ9P2W1 217 aaPredicted RBP12.17□□□□□ -0.46
NUDCD3-201ENST00000338427 PRODH2Q9UF12 536 aa12.17□□□□□ -0.46
NUDCD3-201ENST00000338427 KCNN3Q9UGI6 736 aa12.17□□□□□ -0.46
NUDCD3-201ENST00000338427 DCDC2Q9UHG0 476 aa12.17□□□□□ -0.46
NUDCD3-201ENST00000338427 CFL2Q9Y281 166 aa12.17□□□□□ -0.46
NUDCD3-201ENST00000338427 POLR3HQ9Y535 204 aaPredicted RBP12.17□□□□□ -0.46
NUDCD3-201ENST00000338427 PTGDR2Q9Y5Y4 395 aa12.17□□□□□ -0.46
NUDCD3-201ENST00000338427 PRRC2AP48634 2157 aaKnown RBP12.16□□□□□ -0.46
NUDCD3-201ENST00000338427 PRAMEF25A6NGN4 478 aa12.16□□□□□ -0.46
NUDCD3-201ENST00000338427 FRG2CA6NGY1 282 aa12.16□□□□□ -0.46
NUDCD3-201ENST00000338427 TO15178 435 aa12.16□□□□□ -0.46
NUDCD3-201ENST00000338427 GSTA1P08263 222 aa12.16□□□□□ -0.46
NUDCD3-201ENST00000338427 MYL2P10916 166 aa12.16□□□□□ -0.46
NUDCD3-201ENST00000338427 KIR2DL3P43628 341 aa12.16□□□□□ -0.46
NUDCD3-201ENST00000338427 RPP38P78345 283 aaKnown RBP12.16□□□□□ -0.46
NUDCD3-201ENST00000338427 SLC25A35Q3KQZ1 300 aa12.16□□□□□ -0.46
NUDCD3-201ENST00000338427 SH2D4BQ5SQS7 431 aa12.16□□□□□ -0.46
NUDCD3-201ENST00000338427 ZYG11AQ6WRX3 759 aa12.16□□□□□ -0.46
NUDCD3-201ENST00000338427 LINC01560Q8TB33 94 aa12.16□□□□□ -0.46
NUDCD3-201ENST00000338427 ZNF675Q8TD23 568 aa12.16□□□□□ -0.46
NUDCD3-201ENST00000338427 ACMSDQ8TDX5 336 aa12.16□□□□□ -0.46
NUDCD3-201ENST00000338427 EFHD2Q96C19 240 aaPredicted RBP12.16□□□□□ -0.46
NUDCD3-201ENST00000338427 VSTM2LQ96N03 204 aa12.16□□□□□ -0.46
NUDCD3-201ENST00000338427 COL21A1Q96P44 957 aa12.16□□□□□ -0.46
NUDCD3-201ENST00000338427 BBS4Q96RK4 519 aa12.16□□□□□ -0.46
NUDCD3-201ENST00000338427 TUBA1CQ9BQE3 449 aa12.16□□□□□ -0.46
NUDCD3-201ENST00000338427 GPATCH1Q9BRR8 931 aaKnown RBP12.16□□□□□ -0.46
NUDCD3-201ENST00000338427 RTN4RQ9BZR6 473 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms