RNA–Protein interactions for RNA: ENST00000337571.8

CAPN3-202, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-202ENST00000337571 TRMT12Q53H54 448 aaKnown RBP9.73□□□□□ -0.85
CAPN3-202ENST00000337571 EIPR1Q53HC9 387 aa9.73□□□□□ -0.85
CAPN3-202ENST00000337571 UBAP2Q5T6F2 1119 aaKnown RBP9.73□□□□□ -0.85
CAPN3-202ENST00000337571 FNDC7Q5VTL7 733 aa9.73□□□□□ -0.85
CAPN3-202ENST00000337571 SCIMPQ6UWF3 145 aa9.73□□□□□ -0.85
CAPN3-202ENST00000337571 GPRIN3Q6ZVF9 776 aa9.73□□□□□ -0.85
CAPN3-202ENST00000337571 SEM1Q6ZVN7 128 aa9.73□□□□□ -0.85
CAPN3-202ENST00000337571 LCA5Q86VQ0 697 aa9.73□□□□□ -0.85
CAPN3-202ENST00000337571 CCDC116Q8IYX3 515 aa9.73□□□□□ -0.85
CAPN3-202ENST00000337571 CDYL2Q8N8U2 506 aa9.73□□□□□ -0.85
CAPN3-202ENST00000337571 GBP7Q8N8V2 638 aaPredicted RBP9.73□□□□□ -0.85
CAPN3-202ENST00000337571 FAM83FQ8NEG4 500 aaPredicted RBP9.73□□□□□ -0.85
CAPN3-202ENST00000337571 OR52R1Q8NGF1 315 aa9.73□□□□□ -0.85
CAPN3-202ENST00000337571 NRGNQ92686 78 aa9.73□□□□□ -0.85
CAPN3-202ENST00000337571 NINJ1Q92982 152 aa9.73□□□□□ -0.85
CAPN3-202ENST00000337571 WDYHV1Q96HA8 205 aa9.73□□□□□ -0.85
CAPN3-202ENST00000337571 COL21A1Q96P44 957 aa9.73□□□□□ -0.85
CAPN3-202ENST00000337571 HBEGFQ99075 208 aa9.73□□□□□ -0.85
CAPN3-202ENST00000337571 OSBPL11Q9BXB4 747 aa9.73□□□□□ -0.85
CAPN3-202ENST00000337571 C1QTNF3Q9BXJ4 246 aa9.73□□□□□ -0.85
CAPN3-202ENST00000337571 ITPAQ9BY32 194 aa9.73□□□□□ -0.85
CAPN3-202ENST00000337571 UGT2B28Q9BY64 529 aa9.73□□□□□ -0.85
CAPN3-202ENST00000337571 MAT2BQ9NZL9 334 aa9.73□□□□□ -0.85
CAPN3-202ENST00000337571 SENP1Q9P0U3 644 aa9.73□□□□□ -0.85
CAPN3-202ENST00000337571 FETUBQ9UGM5 382 aa9.73□□□□□ -0.85
CAPN3-202ENST00000337571 MAPRE3Q9UPY8 281 aa9.73□□□□□ -0.85
CAPN3-202ENST00000337571 EXO1Q9UQ84 846 aaKnown RBP9.73□□□□□ -0.85
CAPN3-202ENST00000337571 PLLPQ9Y342 182 aa9.73□□□□□ -0.85
CAPN3-202ENST00000337571 EXPH5Q8NEV8 1989 aa9.72□□□□□ -0.85
CAPN3-202ENST00000337571 OR6C70A6NIJ9 312 aa9.72□□□□□ -0.85
CAPN3-202ENST00000337571 ESPNB1AK53 854 aa9.72□□□□□ -0.85
CAPN3-202ENST00000337571 EEF1E1-BLOC1S5C9J1V9 151 aa9.72□□□□□ -0.85
CAPN3-202ENST00000337571 H0Y3Z8 333 aa9.72□□□□□ -0.85
CAPN3-202ENST00000337571 EEF1E1O43324 174 aaKnown RBP9.72□□□□□ -0.85
CAPN3-202ENST00000337571 ERN1O75460 977 aaKnown RBP9.72□□□□□ -0.85
CAPN3-202ENST00000337571 CPN1P15169 458 aa9.72□□□□□ -0.85
CAPN3-202ENST00000337571 IMPDH1P20839 514 aa9.72□□□□□ -0.85
CAPN3-202ENST00000337571 ATP5F1P24539 256 aaPredicted RBP9.72□□□□□ -0.85
CAPN3-202ENST00000337571 PTPN6P29350 595 aa9.72□□□□□ -0.85
CAPN3-202ENST00000337571 IL12BP29460 328 aa9.72□□□□□ -0.85
CAPN3-202ENST00000337571 MPIP34949 423 aa9.72□□□□□ -0.85
CAPN3-202ENST00000337571 WNT3P56703 355 aa9.72□□□□□ -0.85
CAPN3-202ENST00000337571 PPP2R2AP63151 447 aa9.72□□□□□ -0.85
CAPN3-202ENST00000337571 PSPHP78330 225 aa9.72□□□□□ -0.85
CAPN3-202ENST00000337571 MRPS35P82673 323 aaKnown RBP9.72□□□□□ -0.85
CAPN3-202ENST00000337571 ACSM2AQ08AH3 577 aa9.72□□□□□ -0.85
CAPN3-202ENST00000337571 FBXL19-AS1Q494R0 122 aa9.72□□□□□ -0.85
CAPN3-202ENST00000337571 SPIN4Q56A73 249 aa9.72□□□□□ -0.85
CAPN3-202ENST00000337571 SPDYAQ5MJ70 313 aa9.72□□□□□ -0.85
CAPN3-202ENST00000337571 ACSM2BQ68CK6 577 aa9.72□□□□□ -0.85
CAPN3-202ENST00000337571 FAM180BQ6P0A1 224 aa9.72□□□□□ -0.85
CAPN3-202ENST00000337571 TMEM81Q6P7N7 255 aa9.72□□□□□ -0.85
CAPN3-202ENST00000337571 AAGABQ6PD74 315 aa9.72□□□□□ -0.85
CAPN3-202ENST00000337571 SLC22A9Q8IVM8 553 aa9.72□□□□□ -0.85
CAPN3-202ENST00000337571 IFT20Q8IY31 132 aa9.72□□□□□ -0.85
CAPN3-202ENST00000337571 MMP21Q8N119 569 aa9.72□□□□□ -0.85
CAPN3-202ENST00000337571 CNPY4Q8N129 248 aa9.72□□□□□ -0.85
CAPN3-202ENST00000337571 RELL2Q8NC24 303 aaPredicted RBP9.72□□□□□ -0.85
CAPN3-202ENST00000337571 NAXEQ8NCW5 288 aa9.72□□□□□ -0.85
CAPN3-202ENST00000337571 RDH11Q8TC12 318 aa9.72□□□□□ -0.85
CAPN3-202ENST00000337571 ZPLD1Q8TCW7 415 aa9.72□□□□□ -0.85
CAPN3-202ENST00000337571 CTHRC1Q96CG8 243 aa9.72□□□□□ -0.85
CAPN3-202ENST00000337571 ERP27Q96DN0 273 aa9.72□□□□□ -0.85
CAPN3-202ENST00000337571 CNRIP1Q96F85 164 aaPredicted RBP9.72□□□□□ -0.85
CAPN3-202ENST00000337571 BBS4Q96RK4 519 aa9.72□□□□□ -0.85
CAPN3-202ENST00000337571 NODALQ96S42 347 aa9.72□□□□□ -0.85
CAPN3-202ENST00000337571 TM9SF2Q99805 663 aa9.72□□□□□ -0.85
CAPN3-202ENST00000337571 FOXC2Q99958 501 aa9.72□□□□□ -0.85
CAPN3-202ENST00000337571 USB1Q9BQ65 265 aaKnown RBP9.72□□□□□ -0.85
CAPN3-202ENST00000337571 GPATCH1Q9BRR8 931 aaKnown RBP9.72□□□□□ -0.85
CAPN3-202ENST00000337571 SERHLQ9NQF3 203 aa9.72□□□□□ -0.85
CAPN3-202ENST00000337571 RASSF1Q9NS23 344 aa9.72□□□□□ -0.85
CAPN3-202ENST00000337571 CCM2LQ9NUG4 571 aaPredicted RBP9.72□□□□□ -0.85
CAPN3-202ENST00000337571 EHD3Q9NZN3 535 aa9.72□□□□□ -0.85
CAPN3-202ENST00000337571 ZNF639Q9UID6 485 aa9.72□□□□□ -0.85
CAPN3-202ENST00000337571 MCM8Q9UJA3 840 aa9.72□□□□□ -0.85
CAPN3-202ENST00000337571 DTX4Q9Y2E6 619 aa9.72□□□□□ -0.85
CAPN3-202ENST00000337571 DLGAP4Q9Y2H0 992 aa9.72□□□□□ -0.85
CAPN3-202ENST00000337571 CCDC168Q8NDH2 2452 aa9.71□□□□□ -0.85
CAPN3-202ENST00000337571 A0A1B0GTL3 188 aa9.71□□□□□ -0.86
CAPN3-202ENST00000337571 MBD3L4A6NDZ8 208 aaPredicted RBP9.71□□□□□ -0.86
CAPN3-202ENST00000337571 MBD3L3A6NE82 208 aaPredicted RBP9.71□□□□□ -0.86
CAPN3-202ENST00000337571 PRAMEF25A6NGN4 478 aa9.71□□□□□ -0.86
CAPN3-202ENST00000337571 FRG2CA6NGY1 282 aa9.71□□□□□ -0.86
CAPN3-202ENST00000337571 MBD3L5A6NJ08 208 aaPredicted RBP9.71□□□□□ -0.86
CAPN3-202ENST00000337571 A6NNC1 897 aa9.71□□□□□ -0.86
CAPN3-202ENST00000337571 PCDH7O60245 1069 aa9.71□□□□□ -0.86
CAPN3-202ENST00000337571 UGT2B11O75310 529 aa9.71□□□□□ -0.86
CAPN3-202ENST00000337571 CBX7O95931 251 aa9.71□□□□□ -0.86
CAPN3-202ENST00000337571 IL18BPO95998 194 aa9.71□□□□□ -0.86
CAPN3-202ENST00000337571 IL3P08700 152 aa9.71□□□□□ -0.86
CAPN3-202ENST00000337571 TMIGD3P0DMS9 266 aaPredicted RBP9.71□□□□□ -0.86
CAPN3-202ENST00000337571 EPXP11678 715 aa9.71□□□□□ -0.86
CAPN3-202ENST00000337571 CD99P14209 185 aa9.71□□□□□ -0.86
CAPN3-202ENST00000337571 PCSK2P16519 638 aa9.71□□□□□ -0.86
CAPN3-202ENST00000337571 TACR1P25103 407 aa9.71□□□□□ -0.86
CAPN3-202ENST00000337571 EMDP50402 254 aa9.71□□□□□ -0.86
CAPN3-202ENST00000337571 AGFG1P52594 562 aaKnown RBP9.71□□□□□ -0.86
CAPN3-202ENST00000337571 ZNF136P52737 540 aa9.71□□□□□ -0.86
CAPN3-202ENST00000337571 EEF1A1P68104 462 aaKnown RBP9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms