RNA–Protein interactions for RNA: ENST00000336916.8

FN1-202, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,435 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-202ENST00000336916 PXKQ7Z7A4 578 aa11.68□□□□□ -0.54
FN1-202ENST00000336916 KLHDC8AQ8IYD2 350 aa11.68□□□□□ -0.54
FN1-202ENST00000336916 ZNF619Q8N2I2 560 aa11.68□□□□□ -0.54
FN1-202ENST00000336916 ANKK1Q8NFD2 765 aa11.68□□□□□ -0.54
FN1-202ENST00000336916 TAMM41Q96BW9 452 aa11.68□□□□□ -0.54
FN1-202ENST00000336916 ARMC5Q96C12 935 aa11.68□□□□□ -0.54
FN1-202ENST00000336916 RRNAD1Q96FB5 475 aaKnown RBP11.68□□□□□ -0.54
FN1-202ENST00000336916 IP6K3Q96PC2 410 aa11.68□□□□□ -0.54
FN1-202ENST00000336916 CRB3Q9BUF7 120 aa11.68□□□□□ -0.54
FN1-202ENST00000336916 NUP50Q9UKX7 468 aa11.68□□□□□ -0.54
FN1-202ENST00000336916 FARSAQ9Y285 508 aaKnown RBP11.68□□□□□ -0.54
FN1-202ENST00000336916 RNF215Q9Y6U7 377 aa11.68□□□□□ -0.54
FN1-202ENST00000336916 INMTO95050 263 aa11.68□□□□□ -0.54
FN1-202ENST00000336916 AGTR2P50052 363 aa11.68□□□□□ -0.54
FN1-202ENST00000336916 RNF128Q8TEB7 428 aa11.68□□□□□ -0.54
FN1-202ENST00000336916 CANT1Q8WVQ1 401 aa11.68□□□□□ -0.54
FN1-202ENST00000336916 FUZQ9BT04 418 aa11.68□□□□□ -0.54
FN1-202ENST00000336916 NAALAD2Q9Y3Q0 740 aa11.68□□□□□ -0.54
FN1-202ENST00000336916 THADAQ6YHU6 1953 aa11.68□□□□□ -0.54
FN1-202ENST00000336916 S100A10P60903 97 aa11.68□□□□□ -0.54
FN1-202ENST00000336916 EGFLAMQ63HQ2 1017 aa11.68□□□□□ -0.54
FN1-202ENST00000336916 NANOGP8Q6NSW7 305 aa11.68□□□□□ -0.54
FN1-202ENST00000336916 PDZD3Q86UT5 571 aa11.68□□□□□ -0.54
FN1-202ENST00000336916 ZNF366Q8N895 744 aa11.68□□□□□ -0.54
FN1-202ENST00000336916 L3HYPDHQ96EM0 354 aa11.68□□□□□ -0.54
FN1-202ENST00000336916 OR4K3Q96R72 315 aa11.68□□□□□ -0.54
FN1-202ENST00000336916 MAP3K3Q99759 626 aa11.68□□□□□ -0.54
FN1-202ENST00000336916 HIPK2Q9H2X6 1198 aa11.68□□□□□ -0.54
FN1-202ENST00000336916 EPHX3Q9H6B9 360 aa11.68□□□□□ -0.54
FN1-202ENST00000336916 NANOGQ9H9S0 305 aa11.68□□□□□ -0.54
FN1-202ENST00000336916 CFHP08603 1231 aa11.67□□□□□ -0.54
FN1-202ENST00000336916 BLMHQ13867 455 aa11.67□□□□□ -0.54
FN1-202ENST00000336916 ZNF404Q494X3 552 aa11.67□□□□□ -0.54
FN1-202ENST00000336916 GPR139Q6DWJ6 353 aa11.67□□□□□ -0.54
FN1-202ENST00000336916 OR1J2Q8NGS2 313 aa11.67□□□□□ -0.54
FN1-202ENST00000336916 SSC5DA1L4H1 1573 aa11.67□□□□□ -0.54
FN1-202ENST00000336916 TRAPPC13A5PLN9 417 aa11.67□□□□□ -0.54
FN1-202ENST00000336916 RRP8O43159 456 aaKnown RBP11.67□□□□□ -0.54
FN1-202ENST00000336916 ITGB1P05556 798 aa11.67□□□□□ -0.54
FN1-202ENST00000336916 CSN2P05814 226 aa11.67□□□□□ -0.54
FN1-202ENST00000336916 CYBAP13498 195 aa11.67□□□□□ -0.54
FN1-202ENST00000336916 CD6P30203 668 aa11.67□□□□□ -0.54
FN1-202ENST00000336916 S100A12P80511 92 aa11.67□□□□□ -0.54
FN1-202ENST00000336916 BCL2A1Q16548 175 aa11.67□□□□□ -0.54
FN1-202ENST00000336916 PM20D1Q6GTS8 502 aa11.67□□□□□ -0.54
FN1-202ENST00000336916 HTR3DQ70Z44 454 aa11.67□□□□□ -0.54
FN1-202ENST00000336916 SMG9Q9H0W8 520 aaKnown RBP11.67□□□□□ -0.54
FN1-202ENST00000336916 PLAGL1Q9UM63 463 aa11.67□□□□□ -0.54
FN1-202ENST00000336916 FAM149AA5PLN7 773 aa11.67□□□□□ -0.54
FN1-202ENST00000336916 GCH1P30793 250 aa11.67□□□□□ -0.54
FN1-202ENST00000336916 DGKQP52824 942 aa11.67□□□□□ -0.54
FN1-202ENST00000336916 MOGQ16653 247 aa11.67□□□□□ -0.54
FN1-202ENST00000336916 STEAP4Q687X5 459 aa11.67□□□□□ -0.54
FN1-202ENST00000336916 C17orf99Q6UX52 265 aa11.67□□□□□ -0.54
FN1-202ENST00000336916 ZNF224Q9NZL3 707 aa11.67□□□□□ -0.54
FN1-202ENST00000336916 PRELID1Q9Y255 219 aa11.67□□□□□ -0.54
FN1-202ENST00000336916 BRCA1P38398 1863 aaKnown RBP11.67□□□□□ -0.54
FN1-202ENST00000336916 AFF3P51826 1226 aaKnown RBP11.67□□□□□ -0.54
FN1-202ENST00000336916 KHDC1Q4VXA5 237 aaKnown RBP11.67□□□□□ -0.54
FN1-202ENST00000336916 FIGLAQ6QHK4 219 aa11.67□□□□□ -0.54
FN1-202ENST00000336916 TMED4Q7Z7H5 227 aa11.67□□□□□ -0.54
FN1-202ENST00000336916 GALNT15Q8N3T1 639 aa11.67□□□□□ -0.54
FN1-202ENST00000336916 VN1R2Q8NFZ6 395 aa11.67□□□□□ -0.54
FN1-202ENST00000336916 HLA-CQ95604 372 aa11.67□□□□□ -0.54
FN1-202ENST00000336916 RTP3Q9BQQ7 232 aa11.67□□□□□ -0.54
FN1-202ENST00000336916 CCDC32Q9BV29 185 aa11.67□□□□□ -0.54
FN1-202ENST00000336916 SLC22A7Q9Y694 548 aa11.67□□□□□ -0.54
FN1-202ENST00000336916 HNRNPA1L2Q32P51 320 aaKnown RBP11.67□□□□□ -0.54
FN1-202ENST00000336916 OGFOD2Q6N063 350 aa11.67□□□□□ -0.54
FN1-202ENST00000336916 TRAPPC6BQ86SZ2 158 aa11.67□□□□□ -0.54
FN1-202ENST00000336916 OR14L1PQ8NHC6 308 aa11.67□□□□□ -0.54
FN1-202ENST00000336916 TIMM29Q9BSF4 260 aa11.67□□□□□ -0.54
FN1-202ENST00000336916 OR10A5Q9H207 317 aa11.67□□□□□ -0.54
FN1-202ENST00000336916 OR10A2Q9H208 303 aa11.67□□□□□ -0.54
FN1-202ENST00000336916 FAM69BQ5VUD6 431 aa11.67□□□□□ -0.54
FN1-202ENST00000336916 ANKRD26P1Q6NSI1 321 aa11.67□□□□□ -0.54
FN1-202ENST00000336916 TCEANCQ8N8B7 351 aa11.67□□□□□ -0.54
FN1-202ENST00000336916 MSI2Q96DH6 328 aaKnown RBP11.67□□□□□ -0.54
FN1-202ENST00000336916 PARPBPQ9NWS1 579 aa11.67□□□□□ -0.54
FN1-202ENST00000336916 TAS2R31P59538 309 aa11.66□□□□□ -0.54
FN1-202ENST00000336916 DSC1Q08554 894 aa11.66□□□□□ -0.54
FN1-202ENST00000336916 PON2Q15165 354 aa11.66□□□□□ -0.54
FN1-202ENST00000336916 PCBP2Q15366 365 aaKnown RBP eCLIP11.66□□□□□ -0.542e-9■■□□□ 13.3
FN1-202ENST00000336916 RAB41Q5JT25 222 aa11.66□□□□□ -0.54
FN1-202ENST00000336916 PRAMEF8Q5VWM4 474 aa11.66□□□□□ -0.54
FN1-202ENST00000336916 PRAMEF7Q5VXH5 474 aa11.66□□□□□ -0.54
FN1-202ENST00000336916 ZDHHC24Q6UX98 284 aa11.66□□□□□ -0.54
FN1-202ENST00000336916 TMEM173Q86WV6 379 aaPredicted RBP11.66□□□□□ -0.54
FN1-202ENST00000336916 SCML4Q8N228 414 aa11.66□□□□□ -0.54
FN1-202ENST00000336916 RCBTB1Q8NDN9 531 aa11.66□□□□□ -0.54
FN1-202ENST00000336916 GPN2Q9H9Y4 310 aaPredicted RBP11.66□□□□□ -0.54
FN1-202ENST00000336916 RDH14Q9HBH5 336 aa11.66□□□□□ -0.54
FN1-202ENST00000336916 ACAD8Q9UKU7 415 aa11.66□□□□□ -0.54
FN1-202ENST00000336916 GABRQQ9UN88 632 aa11.66□□□□□ -0.54
FN1-202ENST00000336916 A0A087WUU8 490 aa11.66□□□□□ -0.54
FN1-202ENST00000336916 GFRA2O00451 464 aa11.66□□□□□ -0.54
FN1-202ENST00000336916 AZGP1P25311 298 aaKnown RBP11.66□□□□□ -0.54
FN1-202ENST00000336916 GNRHRP30968 328 aa11.66□□□□□ -0.54
FN1-202ENST00000336916 TSTQ16762 297 aaKnown RBP11.66□□□□□ -0.54
FN1-202ENST00000336916 BIRC7Q96CA5 298 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms