RNA–Protein interactions for RNA: ENST00000336648.8

HLCS-201, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-201ENST00000336648 TMEM173Q86WV6 379 aaPredicted RBP12.47□□□□□ -0.41
HLCS-201ENST00000336648 ZNF611Q8N823 705 aa12.47□□□□□ -0.41
HLCS-201ENST00000336648 ZNF419Q96HQ0 510 aaPredicted RBP12.47□□□□□ -0.41
HLCS-201ENST00000336648 MTHFD2LQ9H903 347 aaPredicted RBP12.47□□□□□ -0.41
HLCS-201ENST00000336648 CPNE5Q9HCH3 593 aa12.47□□□□□ -0.41
HLCS-201ENST00000336648 C14orf119Q9NWQ9 140 aa12.47□□□□□ -0.41
HLCS-201ENST00000336648 C11orf98E9PRG8 122 aa12.47□□□□□ -0.41
HLCS-201ENST00000336648 PRAF2O60831 178 aa12.47□□□□□ -0.41
HLCS-201ENST00000336648 CFHP08603 1231 aa12.47□□□□□ -0.41
HLCS-201ENST00000336648 MYF6P23409 242 aa12.47□□□□□ -0.41
HLCS-201ENST00000336648 IL32P24001 234 aa12.47□□□□□ -0.41
HLCS-201ENST00000336648 MTNR1AP48039 350 aa12.47□□□□□ -0.41
HLCS-201ENST00000336648 AGTR2P50052 363 aa12.47□□□□□ -0.41
HLCS-201ENST00000336648 TCTE1Q5JU00 501 aa12.47□□□□□ -0.41
HLCS-201ENST00000336648 TMEM135Q86UB9 458 aa12.47□□□□□ -0.41
HLCS-201ENST00000336648 MRGPRX2Q96LB1 330 aa12.47□□□□□ -0.41
HLCS-201ENST00000336648 PEBP4Q96S96 227 aa12.47□□□□□ -0.41
HLCS-201ENST00000336648 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.47□□□□□ -0.41
HLCS-201ENST00000336648 KLHL13Q9P2N7 655 aa12.47□□□□□ -0.41
HLCS-201ENST00000336648 SMIM30A4D0T7 59 aa12.46□□□□□ -0.41
HLCS-201ENST00000336648 CLN5O75503 358 aa12.46□□□□□ -0.41
HLCS-201ENST00000336648 MMP2P08253 660 aa12.46□□□□□ -0.41
HLCS-201ENST00000336648 EVI2BP34910 448 aa12.46□□□□□ -0.41
HLCS-201ENST00000336648 TAS2R38P59533 333 aa12.46□□□□□ -0.41
HLCS-201ENST00000336648 LILRB2Q8N423 598 aa12.46□□□□□ -0.41
HLCS-201ENST00000336648 L3HYPDHQ96EM0 354 aa12.46□□□□□ -0.41
HLCS-201ENST00000336648 ABCC6O95255 1503 aa12.46□□□□□ -0.41
HLCS-201ENST00000336648 EFCAB7A8K855 629 aa12.46□□□□□ -0.41
HLCS-201ENST00000336648 EEF1E1-BLOC1S5C9J1V9 151 aa12.46□□□□□ -0.41
HLCS-201ENST00000336648 MAN2B1O00754 1011 aa12.46□□□□□ -0.41
HLCS-201ENST00000336648 GOSR2O14653 212 aa12.46□□□□□ -0.41
HLCS-201ENST00000336648 SHOXO15266 292 aa12.46□□□□□ -0.41
HLCS-201ENST00000336648 LCMT2O60294 686 aaKnown RBP12.46□□□□□ -0.41
HLCS-201ENST00000336648 MAGEB1P43366 347 aa12.46□□□□□ -0.41
HLCS-201ENST00000336648 AFF3P51826 1226 aaKnown RBP12.46□□□□□ -0.41
HLCS-201ENST00000336648 ELAVL3Q14576 367 aaKnown RBP12.46□□□□□ -0.41
HLCS-201ENST00000336648 GRASPQ7Z6J2 395 aaPredicted RBP12.46□□□□□ -0.41
HLCS-201ENST00000336648 PLD6Q8N2A8 252 aaKnown RBP12.46□□□□□ -0.41
HLCS-201ENST00000336648 GPR137CQ8N3F9 429 aa12.46□□□□□ -0.41
HLCS-201ENST00000336648 CSNK1A1LQ8N752 337 aa12.46□□□□□ -0.41
HLCS-201ENST00000336648 OR6Q1Q8NGQ2 317 aa12.46□□□□□ -0.41
HLCS-201ENST00000336648 DDIT4LQ96D03 193 aa12.46□□□□□ -0.41
HLCS-201ENST00000336648 IGSF21Q96ID5 467 aa12.46□□□□□ -0.41
HLCS-201ENST00000336648 HERPUD2Q9BSE4 406 aa12.46□□□□□ -0.41
HLCS-201ENST00000336648 RLIMQ9NVW2 624 aa12.46□□□□□ -0.41
HLCS-201ENST00000336648 SIX4Q9UIU6 781 aa12.46□□□□□ -0.41
HLCS-201ENST00000336648 UGDHO60701 494 aa12.46□□□□□ -0.41
HLCS-201ENST00000336648 TYRP1P17643 537 aa12.46□□□□□ -0.41
HLCS-201ENST00000336648 RAB31Q13636 194 aa12.46□□□□□ -0.41
HLCS-201ENST00000336648 BCL2L15Q5TBC7 163 aa12.46□□□□□ -0.41
HLCS-201ENST00000336648 ZNF100Q8IYN0 542 aa12.46□□□□□ -0.41
HLCS-201ENST00000336648 GLIS1Q8NBF1 620 aa12.46□□□□□ -0.41
HLCS-201ENST00000336648 LRR1Q96L50 414 aa12.46□□□□□ -0.41
HLCS-201ENST00000336648 ZNF442Q9H7R0 627 aa12.46□□□□□ -0.41
HLCS-201ENST00000336648 GPN2Q9H9Y4 310 aaPredicted RBP12.46□□□□□ -0.41
HLCS-201ENST00000336648 ZNF223Q9UK11 482 aaPredicted RBP12.46□□□□□ -0.41
HLCS-201ENST00000336648 OR6C74A6NCV1 312 aa12.46□□□□□ -0.42
HLCS-201ENST00000336648 BRINP1O60477 761 aa12.46□□□□□ -0.42
HLCS-201ENST00000336648 TFPTP0C1Z6 253 aa12.46□□□□□ -0.42
HLCS-201ENST00000336648 TBPL1P62380 186 aa12.46□□□□□ -0.42
HLCS-201ENST00000336648 GRM2Q14416 872 aa12.46□□□□□ -0.42
HLCS-201ENST00000336648 LRIT3Q3SXY7 679 aa12.46□□□□□ -0.42
HLCS-201ENST00000336648 C22orf42Q6IC83 251 aa12.46□□□□□ -0.42
HLCS-201ENST00000336648 SKA3Q8IX90 412 aa12.46□□□□□ -0.42
HLCS-201ENST00000336648 Q8N9G6 341 aaPredicted RBP12.46□□□□□ -0.42
HLCS-201ENST00000336648 OR6C4Q8NGE1 309 aa12.46□□□□□ -0.42
HLCS-201ENST00000336648 ABHD5Q8WTS1 349 aa12.46□□□□□ -0.42
HLCS-201ENST00000336648 MYRFLQ96LU7 910 aa12.46□□□□□ -0.42
HLCS-201ENST00000336648 WDR6Q9NNW5 1121 aaKnown RBP12.46□□□□□ -0.42
HLCS-201ENST00000336648 CACNG4Q9UBN1 327 aa12.46□□□□□ -0.42
HLCS-201ENST00000336648 PSAT1Q9Y617 370 aa12.46□□□□□ -0.42
HLCS-201ENST00000336648 SNAPINO95295 136 aa12.46□□□□□ -0.42
HLCS-201ENST00000336648 SCGB1D1O95968 90 aa12.46□□□□□ -0.42
HLCS-201ENST00000336648 RAC2P15153 192 aa12.46□□□□□ -0.42
HLCS-201ENST00000336648 PRPS1P60891 318 aa12.46□□□□□ -0.42
HLCS-201ENST00000336648 PSPHP78330 225 aa12.46□□□□□ -0.42
HLCS-201ENST00000336648 CRYZQ08257 329 aaKnown RBP12.46□□□□□ -0.42
HLCS-201ENST00000336648 FAM205BPQ63HN1 556 aa12.46□□□□□ -0.42
HLCS-201ENST00000336648 OR5H2Q8NGV7 314 aa12.46□□□□□ -0.42
HLCS-201ENST00000336648 BRI3BPQ8WY22 251 aa12.46□□□□□ -0.42
HLCS-201ENST00000336648 C22orf15Q8WYQ4 148 aa12.46□□□□□ -0.42
HLCS-201ENST00000336648 CDC6Q99741 560 aa12.46□□□□□ -0.42
HLCS-201ENST00000336648 CACNG6Q9BXT2 260 aa12.46□□□□□ -0.42
HLCS-201ENST00000336648 ATG4BQ9Y4P1 393 aa12.46□□□□□ -0.42
HLCS-201ENST00000336648 A0A0U1RQK1 487 aa12.45□□□□□ -0.42
HLCS-201ENST00000336648 FAM230AA0A1W2PPH8 454 aa12.45□□□□□ -0.42
HLCS-201ENST00000336648 K7EPK0 472 aa12.45□□□□□ -0.42
HLCS-201ENST00000336648 COCHO43405 550 aa12.45□□□□□ -0.42
HLCS-201ENST00000336648 SERPINF1P36955 418 aa12.45□□□□□ -0.42
HLCS-201ENST00000336648 CCBE1Q6UXH8 406 aaPredicted RBP12.45□□□□□ -0.42
HLCS-201ENST00000336648 DNAJC22Q8N4W6 341 aa12.45□□□□□ -0.42
HLCS-201ENST00000336648 FAM71E2Q8N5Q1 922 aa12.45□□□□□ -0.42
HLCS-201ENST00000336648 OR10Q1Q8NGQ4 319 aa12.45□□□□□ -0.42
HLCS-201ENST00000336648 TGM7Q96PF1 710 aa12.45□□□□□ -0.42
HLCS-201ENST00000336648 HDHD5Q9BXW7 423 aa12.45□□□□□ -0.42
HLCS-201ENST00000336648 C2orf42Q9NWW7 574 aa12.45□□□□□ -0.42
HLCS-201ENST00000336648 COQ3Q9NZJ6 369 aa12.45□□□□□ -0.42
HLCS-201ENST00000336648 ANKRD28O15084 1053 aa12.45□□□□□ -0.42
HLCS-201ENST00000336648 CDK1P06493 297 aa12.45□□□□□ -0.42
HLCS-201ENST00000336648 CKMT1AP12532 417 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms