RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 UCKL1Q9NWZ5 548 aa11.81□□□□□ -0.52
LIMK1-201ENST00000336180 ZNF226Q9NYT6 803 aa11.81□□□□□ -0.52
LIMK1-201ENST00000336180 EHD3Q9NZN3 535 aa11.81□□□□□ -0.52
LIMK1-201ENST00000336180 SCML1Q9UN30 329 aa11.81□□□□□ -0.52
LIMK1-201ENST00000336180 KPNA4O00629 521 aaPredicted RBP11.8□□□□□ -0.52
LIMK1-201ENST00000336180 IFNA14P01570 189 aa11.8□□□□□ -0.52
LIMK1-201ENST00000336180 MPIP34949 423 aa11.8□□□□□ -0.52
LIMK1-201ENST00000336180 DOC2BQ14184 412 aa11.8□□□□□ -0.52
LIMK1-201ENST00000336180 AMZ1Q400G9 498 aa11.8□□□□□ -0.52
LIMK1-201ENST00000336180 NDNFQ8TB73 568 aa11.8□□□□□ -0.52
LIMK1-201ENST00000336180 ZNF681Q96N22 645 aa11.8□□□□□ -0.52
LIMK1-201ENST00000336180 TGM7Q96PF1 710 aa11.8□□□□□ -0.52
LIMK1-201ENST00000336180 ZFYVE21Q9BQ24 234 aa11.8□□□□□ -0.52
LIMK1-201ENST00000336180 GIMAP4Q9NUV9 329 aa11.8□□□□□ -0.52
LIMK1-201ENST00000336180 MS4A12Q9NXJ0 267 aa11.8□□□□□ -0.52
LIMK1-201ENST00000336180 GPR52Q9Y2T5 361 aa11.8□□□□□ -0.52
LIMK1-201ENST00000336180 TRIM64A6NGJ6 449 aa11.8□□□□□ -0.52
LIMK1-201ENST00000336180 GNB5O14775 395 aa11.8□□□□□ -0.52
LIMK1-201ENST00000336180 GMFGO60234 142 aa11.8□□□□□ -0.52
LIMK1-201ENST00000336180 NOL3O60936 208 aaKnown RBP11.8□□□□□ -0.52
LIMK1-201ENST00000336180 NDUFS2O75306 463 aa11.8□□□□□ -0.52
LIMK1-201ENST00000336180 BCAS1O75363 584 aaPredicted RBP11.8□□□□□ -0.52
LIMK1-201ENST00000336180 DRD2P14416 443 aa11.8□□□□□ -0.52
LIMK1-201ENST00000336180 ELAVL4P26378 380 aaKnown RBP11.8□□□□□ -0.52
LIMK1-201ENST00000336180 KCNJ5P48544 419 aa11.8□□□□□ -0.52
LIMK1-201ENST00000336180 EPS8Q12929 822 aa11.8□□□□□ -0.52
LIMK1-201ENST00000336180 RFX4Q33E94 735 aa11.8□□□□□ -0.52
LIMK1-201ENST00000336180 ZNF311Q5JNZ3 666 aa11.8□□□□□ -0.52
LIMK1-201ENST00000336180 PODNL1Q6PEZ8 512 aa11.8□□□□□ -0.52
LIMK1-201ENST00000336180 ADAMTS15Q8TE58 950 aa11.8□□□□□ -0.52
LIMK1-201ENST00000336180 TANKQ92844 425 aa11.8□□□□□ -0.52
LIMK1-201ENST00000336180 OTULINQ96BN8 352 aa11.8□□□□□ -0.52
LIMK1-201ENST00000336180 HSPA12BQ96MM6 686 aa11.8□□□□□ -0.52
LIMK1-201ENST00000336180 COPS4Q9BT78 406 aa11.8□□□□□ -0.52
LIMK1-201ENST00000336180 GABARAPL1Q9H0R8 117 aa11.8□□□□□ -0.52
LIMK1-201ENST00000336180 DSN1Q9H410 356 aa11.8□□□□□ -0.52
LIMK1-201ENST00000336180 A4GALTQ9NPC4 353 aa11.8□□□□□ -0.52
LIMK1-201ENST00000336180 TRNAU1APQ9NX07 287 aaKnown RBP11.8□□□□□ -0.52
LIMK1-201ENST00000336180 SCN3BQ9NY72 215 aa11.8□□□□□ -0.52
LIMK1-201ENST00000336180 USP36Q9P275 1121 aaKnown RBP11.8□□□□□ -0.52
LIMK1-201ENST00000336180 TMCC3Q9ULS5 477 aa11.8□□□□□ -0.52
LIMK1-201ENST00000336180 HCN4Q9Y3Q4 1203 aa11.8□□□□□ -0.52
LIMK1-201ENST00000336180 PCDH15Q96QU1 1955 aa11.8□□□□□ -0.52
LIMK1-201ENST00000336180 B3GALT2O43825 422 aa11.79□□□□□ -0.52
LIMK1-201ENST00000336180 H1F0P07305 194 aaKnown RBP11.79□□□□□ -0.52
LIMK1-201ENST00000336180 CKMT1AP12532 417 aa11.79□□□□□ -0.52
LIMK1-201ENST00000336180 ALOX12P18054 663 aa11.79□□□□□ -0.52
LIMK1-201ENST00000336180 PCMT1P22061 227 aa11.79□□□□□ -0.52
LIMK1-201ENST00000336180 RABIFP47224 123 aa11.79□□□□□ -0.52
LIMK1-201ENST00000336180 RPS15AP62244 130 aaKnown RBP11.79□□□□□ -0.52
LIMK1-201ENST00000336180 RPL6Q02878 288 aaKnown RBP11.79□□□□□ -0.52
LIMK1-201ENST00000336180 TDGQ13569 410 aa11.79□□□□□ -0.52
LIMK1-201ENST00000336180 DUSP5Q16690 384 aa11.79□□□□□ -0.52
LIMK1-201ENST00000336180 DCST1Q5T197 706 aa11.79□□□□□ -0.52
LIMK1-201ENST00000336180 USP53Q70EK8 1073 aa11.79□□□□□ -0.52
LIMK1-201ENST00000336180 SHFQ7M4L6 423 aa11.79□□□□□ -0.52
LIMK1-201ENST00000336180 RORBQ92753 470 aa11.79□□□□□ -0.52
LIMK1-201ENST00000336180 DNAJA3Q96EY1 480 aa11.79□□□□□ -0.52
LIMK1-201ENST00000336180 PEX11GQ96HA9 241 aa11.79□□□□□ -0.52
LIMK1-201ENST00000336180 RDH12Q96NR8 316 aa11.79□□□□□ -0.52
LIMK1-201ENST00000336180 ZNF607Q96SK3 696 aa11.79□□□□□ -0.52
LIMK1-201ENST00000336180 SPATA9Q9BWV2 254 aa11.79□□□□□ -0.52
LIMK1-201ENST00000336180 EGLN3Q9H6Z9 239 aa11.79□□□□□ -0.52
LIMK1-201ENST00000336180 ACSS1Q9NUB1 689 aaPredicted RBP11.79□□□□□ -0.52
LIMK1-201ENST00000336180 KCMF1Q9P0J7 381 aa11.79□□□□□ -0.52
LIMK1-201ENST00000336180 ITGB1BP2Q9UKP3 347 aa11.79□□□□□ -0.52
LIMK1-201ENST00000336180 IGHV1OR15-9A0A0B4J2B8 117 aa11.79□□□□□ -0.52
LIMK1-201ENST00000336180 PRG2P13727 222 aa11.79□□□□□ -0.52
LIMK1-201ENST00000336180 CPMP14384 443 aa11.79□□□□□ -0.52
LIMK1-201ENST00000336180 RYKP34925 604 aa11.79□□□□□ -0.52
LIMK1-201ENST00000336180 TRHRP34981 398 aaPredicted RBP11.79□□□□□ -0.52
LIMK1-201ENST00000336180 FRKP42685 505 aaPredicted RBP11.79□□□□□ -0.52
LIMK1-201ENST00000336180 SLC35A2P78381 396 aa11.79□□□□□ -0.52
LIMK1-201ENST00000336180 DMWDQ09019 674 aa11.79□□□□□ -0.52
LIMK1-201ENST00000336180 ARMC6Q6NXE6 501 aa11.79□□□□□ -0.52
LIMK1-201ENST00000336180 ABI3BPQ7Z7G0 1075 aa11.79□□□□□ -0.52
LIMK1-201ENST00000336180 SETD9Q8NE22 299 aa11.79□□□□□ -0.52
LIMK1-201ENST00000336180 GAL3ST3Q96A11 431 aa11.79□□□□□ -0.52
LIMK1-201ENST00000336180 HSPBAP1Q96EW2 488 aa11.79□□□□□ -0.52
LIMK1-201ENST00000336180 C10orf90Q96M02 699 aa11.79□□□□□ -0.52
LIMK1-201ENST00000336180 FNDC11Q9BVV2 318 aa11.79□□□□□ -0.52
LIMK1-201ENST00000336180 PHF7Q9BWX1 381 aaPredicted RBP11.79□□□□□ -0.52
LIMK1-201ENST00000336180 GSDMCQ9BYG8 508 aa11.79□□□□□ -0.52
LIMK1-201ENST00000336180 TVP23BQ9NYZ1 205 aa11.79□□□□□ -0.52
LIMK1-201ENST00000336180 ZNF99A8MXY4 864 aaPredicted RBP11.79□□□□□ -0.52
LIMK1-201ENST00000336180 PEX12O00623 359 aa11.79□□□□□ -0.52
LIMK1-201ENST00000336180 LRRTM2O43300 516 aa11.79□□□□□ -0.52
LIMK1-201ENST00000336180 RGS10O43665 173 aa11.79□□□□□ -0.52
LIMK1-201ENST00000336180 UGT2B17O75795 530 aa11.79□□□□□ -0.52
LIMK1-201ENST00000336180 DNAJB5O75953 348 aa11.79□□□□□ -0.52
LIMK1-201ENST00000336180 RHCEP18577 417 aa11.79□□□□□ -0.52
LIMK1-201ENST00000336180 BCKDHBP21953 392 aa11.79□□□□□ -0.52
LIMK1-201ENST00000336180 GSTM2P28161 218 aa11.79□□□□□ -0.52
LIMK1-201ENST00000336180 KHKP50053 298 aa11.79□□□□□ -0.52
LIMK1-201ENST00000336180 GTF2IRD2BQ6EKJ0 949 aa11.79□□□□□ -0.52
LIMK1-201ENST00000336180 B3GLCTQ6Y288 498 aa11.79□□□□□ -0.52
LIMK1-201ENST00000336180 PTCHD4Q6ZW05 846 aa11.79□□□□□ -0.52
LIMK1-201ENST00000336180 ZAR1Q86SH2 424 aa11.79□□□□□ -0.52
LIMK1-201ENST00000336180 GTF2IRD2Q86UP8 949 aa11.79□□□□□ -0.52
LIMK1-201ENST00000336180 ERI1Q8IV48 349 aaKnown RBP11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms