RNA–Protein interactions for RNA: ENST00000334060.8

SHOX-201, Transcript of short stature homeobox, humanhuman

TSL 5 BASIC

Gene SHOX, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-201ENST00000334060 UQCRC2P22695 453 aa15.32■□□□□ 0.04
SHOX-201ENST00000334060 TRPC1P48995 793 aa15.32■□□□□ 0.04
SHOX-201ENST00000334060 ART3Q13508 389 aa15.32■□□□□ 0.04
SHOX-201ENST00000334060 DUSP5Q16690 384 aa15.32■□□□□ 0.04
SHOX-201ENST00000334060 MSANTD1Q6ZTZ1 278 aa15.32■□□□□ 0.04
SHOX-201ENST00000334060 ZAR1Q86SH2 424 aa15.32■□□□□ 0.04
SHOX-201ENST00000334060 ZNF248Q8NDW4 579 aa15.32■□□□□ 0.04
SHOX-201ENST00000334060 VPS37AQ8NEZ2 397 aa15.32■□□□□ 0.04
SHOX-201ENST00000334060 B3GNT7Q8NFL0 401 aa15.32■□□□□ 0.04
SHOX-201ENST00000334060 ZFP28Q8NHY6 868 aa15.32■□□□□ 0.04
SHOX-201ENST00000334060 KIAA1143Q96AT1 154 aaPredicted RBP15.32■□□□□ 0.04
SHOX-201ENST00000334060 LPAR4Q99677 370 aa15.32■□□□□ 0.04
SHOX-201ENST00000334060 RSPO3Q9BXY4 272 aaPredicted RBP15.32■□□□□ 0.04
SHOX-201ENST00000334060 NEUROD4Q9HD90 331 aa15.32■□□□□ 0.04
SHOX-201ENST00000334060 STOML1Q9UBI4 398 aa15.32■□□□□ 0.04
SHOX-201ENST00000334060 PCDHGB4Q9UN71 923 aa15.32■□□□□ 0.04
SHOX-201ENST00000334060 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.32■□□□□ 0.04
SHOX-201ENST00000334060 NBEAQ8NFP9 2946 aa15.32■□□□□ 0.04
SHOX-201ENST00000334060 ARGFXA6NJG6 315 aa15.31■□□□□ 0.04
SHOX-201ENST00000334060 EMC8O43402 210 aa15.31■□□□□ 0.04
SHOX-201ENST00000334060 ZIC2O95409 532 aaPredicted RBP15.31■□□□□ 0.04
SHOX-201ENST00000334060 OR12D1P0DN82 309 aa15.31■□□□□ 0.04
SHOX-201ENST00000334060 TCN1P20061 433 aaPredicted RBP15.31■□□□□ 0.04
SHOX-201ENST00000334060 CHI3L1P36222 383 aaPredicted RBP15.31■□□□□ 0.04
SHOX-201ENST00000334060 MAN2A2P49641 1150 aa15.31■□□□□ 0.04
SHOX-201ENST00000334060 PSG6Q00889 435 aa15.31■□□□□ 0.04
SHOX-201ENST00000334060 MFSD12Q6NUT3 480 aa15.31■□□□□ 0.04
SHOX-201ENST00000334060 OR1N1Q8NGS0 311 aa15.31■□□□□ 0.04
SHOX-201ENST00000334060 OR10A6Q8NH74 314 aa15.31■□□□□ 0.04
SHOX-201ENST00000334060 SLC9A6Q92581 669 aa15.31■□□□□ 0.04
SHOX-201ENST00000334060 VSTM2LQ96N03 204 aa15.31■□□□□ 0.04
SHOX-201ENST00000334060 OR51I1Q9H343 314 aa15.31■□□□□ 0.04
SHOX-201ENST00000334060 DCLRE1BQ9H816 532 aa15.31■□□□□ 0.04
SHOX-201ENST00000334060 FOLH1BQ9HBA9 442 aa15.31■□□□□ 0.04
SHOX-201ENST00000334060 SCOCQ9UIL1 159 aa15.31■□□□□ 0.04
SHOX-201ENST00000334060 MAPRE3Q9UPY8 281 aa15.31■□□□□ 0.04
SHOX-201ENST00000334060 DOCK10Q96BY6 2186 aa15.31■□□□□ 0.04
SHOX-201ENST00000334060 ITPR1Q14643 2758 aa15.31■□□□□ 0.04
SHOX-201ENST00000334060 NSG1A0A0A6YYJ2 146 aa15.31■□□□□ 0.04
SHOX-201ENST00000334060 PRORSD1PA6NEY8 169 aa15.31■□□□□ 0.04
SHOX-201ENST00000334060 C17orf51A8MQB3 221 aa15.31■□□□□ 0.04
SHOX-201ENST00000334060 ERN1O75460 977 aaKnown RBP15.31■□□□□ 0.04
SHOX-201ENST00000334060 F10P00742 488 aa15.31■□□□□ 0.04
SHOX-201ENST00000334060 ERFP50548 548 aa15.31■□□□□ 0.04
SHOX-201ENST00000334060 GZMMP51124 257 aa15.31■□□□□ 0.04
SHOX-201ENST00000334060 ZNF155Q12901 538 aaPredicted RBP15.31■□□□□ 0.04
SHOX-201ENST00000334060 CEACAM7Q14002 265 aa15.31■□□□□ 0.04
SHOX-201ENST00000334060 EBPQ15125 230 aaKnown RBP15.31■□□□□ 0.04
SHOX-201ENST00000334060 RGNQ15493 299 aa15.31■□□□□ 0.04
SHOX-201ENST00000334060 ADRM1Q16186 407 aa15.31■□□□□ 0.04
SHOX-201ENST00000334060 COQ5Q5HYK3 327 aa15.31■□□□□ 0.04
SHOX-201ENST00000334060 UNQ6494/PRO21346Q6UXR6 183 aa15.31■□□□□ 0.04
SHOX-201ENST00000334060 IFNEQ86WN2 208 aa15.31■□□□□ 0.04
SHOX-201ENST00000334060 SIRT6Q8N6T7 355 aa15.31■□□□□ 0.04
SHOX-201ENST00000334060 CDS1Q92903 461 aa15.31■□□□□ 0.04
SHOX-201ENST00000334060 UTP4Q969X6 686 aaKnown RBP15.31■□□□□ 0.04
SHOX-201ENST00000334060 NEURL3Q96EH8 262 aa15.31■□□□□ 0.04
SHOX-201ENST00000334060 SLC35A4Q96G79 324 aa15.31■□□□□ 0.04
SHOX-201ENST00000334060 THUMPD3Q9BV44 507 aaKnown RBP15.31■□□□□ 0.04
SHOX-201ENST00000334060 CADM1Q9BY67 442 aaKnown RBP15.31■□□□□ 0.04
SHOX-201ENST00000334060 NXF5Q9H1B4 397 aaKnown RBP15.31■□□□□ 0.04
SHOX-201ENST00000334060 HEMK1Q9Y5R4 338 aaPredicted RBP15.31■□□□□ 0.04
SHOX-201ENST00000334060 PTPRQQ9UMZ3 2332 aa15.3■□□□□ 0.04
SHOX-201ENST00000334060 TTC36A6NLP5 189 aa15.3■□□□□ 0.04
SHOX-201ENST00000334060 WWP2O00308 870 aa15.3■□□□□ 0.04
SHOX-201ENST00000334060 HMGN4O00479 90 aa15.3■□□□□ 0.04
SHOX-201ENST00000334060 IGKV1D-16P01601 117 aa15.3■□□□□ 0.04
SHOX-201ENST00000334060 ZCCHC18P0CG32 403 aa15.3■□□□□ 0.04
SHOX-201ENST00000334060 CT45A8P0DMV1 189 aa15.3■□□□□ 0.04
SHOX-201ENST00000334060 CT45A9P0DMV2 189 aa15.3■□□□□ 0.04
SHOX-201ENST00000334060 CRATP43155 626 aa15.3■□□□□ 0.04
SHOX-201ENST00000334060 CT45A2Q5DJT8 189 aa15.3■□□□□ 0.04
SHOX-201ENST00000334060 RPS26P11Q5JNZ5 115 aaPredicted RBP15.3■□□□□ 0.04
SHOX-201ENST00000334060 NDUFAF7Q7L592 441 aa15.3■□□□□ 0.04
SHOX-201ENST00000334060 SLC44A2Q8IWA5 706 aaPredicted RBP15.3■□□□□ 0.04
SHOX-201ENST00000334060 SAMD14Q8IZD0 417 aaPredicted RBP15.3■□□□□ 0.04
SHOX-201ENST00000334060 OR14A16Q8NHC5 309 aa15.3■□□□□ 0.04
SHOX-201ENST00000334060 LZICQ8WZA0 190 aa15.3■□□□□ 0.04
SHOX-201ENST00000334060 ADIPOR1Q96A54 375 aa15.3■□□□□ 0.04
SHOX-201ENST00000334060 SLC35G5Q96KT7 338 aa15.3■□□□□ 0.04
SHOX-201ENST00000334060 CDRT15Q96T59 188 aa15.3■□□□□ 0.04
SHOX-201ENST00000334060 SEMA4CQ9C0C4 833 aa15.3■□□□□ 0.04
SHOX-201ENST00000334060 VCX3BQ9H321 246 aa15.3■□□□□ 0.04
SHOX-201ENST00000334060 VCX3AQ9NNX9 186 aa15.3■□□□□ 0.04
SHOX-201ENST00000334060 NTMQ9P121 344 aa15.3■□□□□ 0.04
SHOX-201ENST00000334060 LRCH1Q9Y2L9 728 aa15.3■□□□□ 0.04
SHOX-201ENST00000334060 TPRP12270 2363 aaKnown RBP15.29■□□□□ 0.04
SHOX-201ENST00000334060 CENPVL1A0A0U1RR11 272 aa15.29■□□□□ 0.04
SHOX-201ENST00000334060 DYTNA2CJ06 578 aa15.29■□□□□ 0.04
SHOX-201ENST00000334060 A6NL46 340 aa15.29■□□□□ 0.04
SHOX-201ENST00000334060 RFX3P48380 749 aa15.29■□□□□ 0.04
SHOX-201ENST00000334060 TLE3Q04726 772 aa15.29■□□□□ 0.04
SHOX-201ENST00000334060 EXOSC6Q5RKV6 272 aaKnown RBP15.29■□□□□ 0.04
SHOX-201ENST00000334060 TCTN3Q6NUS6 607 aa15.29■□□□□ 0.04
SHOX-201ENST00000334060 PTOV1Q86YD1 416 aa15.29■□□□□ 0.04
SHOX-201ENST00000334060 ELP5Q8TE02 316 aa15.29■□□□□ 0.04
SHOX-201ENST00000334060 PSMF1Q92530 271 aa15.29■□□□□ 0.04
SHOX-201ENST00000334060 DAZLQ92904 295 aaKnown RBP15.29■□□□□ 0.04
SHOX-201ENST00000334060 ARSGQ96EG1 525 aa15.29■□□□□ 0.04
SHOX-201ENST00000334060 ZNF583Q96ND8 569 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 133.7 ms