RNA–Protein interactions for RNA: ENST00000331563.6

PKP3-201, Transcript of plakophilin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKP3, Length 2,809 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-201ENST00000331563 AP1M2Q9Y6Q5 423 aa17.16■□□□□ 0.34
PKP3-201ENST00000331563 SPTBN5Q9NRC6 3674 aaKnown RBP17.15■□□□□ 0.34
PKP3-201ENST00000331563 MYO9BQ13459 2157 aa17.15■□□□□ 0.34
PKP3-201ENST00000331563 TUBAL3A6NHL2 446 aa17.15■□□□□ 0.34
PKP3-201ENST00000331563 ANXA4P09525 319 aaPredicted RBP17.15■□□□□ 0.34
PKP3-201ENST00000331563 SDHBP21912 280 aa17.15■□□□□ 0.34
PKP3-201ENST00000331563 CHI3L1P36222 383 aaPredicted RBP17.15■□□□□ 0.34
PKP3-201ENST00000331563 BOP1Q14137 746 aaKnown RBP17.15■□□□□ 0.34
PKP3-201ENST00000331563 ZSWIM7Q19AV6 140 aa17.15■□□□□ 0.34
PKP3-201ENST00000331563 RAET1GQ6H3X3 334 aa17.15■□□□□ 0.34
PKP3-201ENST00000331563 SHFQ7M4L6 423 aa17.15■□□□□ 0.34
PKP3-201ENST00000331563 DNAJB7Q7Z6W7 309 aaPredicted RBP17.15■□□□□ 0.34
PKP3-201ENST00000331563 ADGRG2Q8IZP9 1017 aa17.15■□□□□ 0.34
PKP3-201ENST00000331563 SLC19A3Q9BZV2 496 aa17.15■□□□□ 0.34
PKP3-201ENST00000331563 ENAMQ9NRM1 1142 aa17.15■□□□□ 0.34
PKP3-201ENST00000331563 TINAGQ9UJW2 476 aa17.15■□□□□ 0.34
PKP3-201ENST00000331563 RUVBL1Q9Y265 456 aaKnown RBP17.15■□□□□ 0.34
PKP3-201ENST00000331563 H7C0S8 307 aa17.15■□□□□ 0.34
PKP3-201ENST00000331563 EEF1E1O43324 174 aaKnown RBP17.15■□□□□ 0.34
PKP3-201ENST00000331563 ADAP00813 363 aa17.15■□□□□ 0.34
PKP3-201ENST00000331563 SOD2P04179 222 aa17.15■□□□□ 0.34
PKP3-201ENST00000331563 ELK1P19419 428 aa17.15■□□□□ 0.34
PKP3-201ENST00000331563 HNF1BP35680 557 aa17.15■□□□□ 0.34
PKP3-201ENST00000331563 LIMS1P48059 325 aa17.15■□□□□ 0.34
PKP3-201ENST00000331563 HMGA2P52926 109 aa17.15■□□□□ 0.34
PKP3-201ENST00000331563 IRF8Q02556 426 aa17.15■□□□□ 0.34
PKP3-201ENST00000331563 IDNKQ5T6J7 187 aa17.15■□□□□ 0.34
PKP3-201ENST00000331563 ARL14EPQ8N8R7 260 aaPredicted RBP17.15■□□□□ 0.34
PKP3-201ENST00000331563 OR4D10Q8NGI6 311 aa17.15■□□□□ 0.34
PKP3-201ENST00000331563 DPYSL5Q9BPU6 564 aa17.15■□□□□ 0.34
PKP3-201ENST00000331563 TMEM121BQ9BXQ6 578 aaPredicted RBP17.15■□□□□ 0.34
PKP3-201ENST00000331563 BEX1Q9HBH7 125 aa17.15■□□□□ 0.34
PKP3-201ENST00000331563 TRPM5Q9NZQ8 1165 aa17.15■□□□□ 0.34
PKP3-201ENST00000331563 REV1Q9UBZ9 1251 aa17.15■□□□□ 0.34
PKP3-201ENST00000331563 KCNE1BA0A087WTH5 132 aa17.14■□□□□ 0.33
PKP3-201ENST00000331563 C2orf92A0A1B0GVN3 265 aa17.14■□□□□ 0.33
PKP3-201ENST00000331563 PRKYO43930 277 aa17.14■□□□□ 0.33
PKP3-201ENST00000331563 C1SP09871 688 aa17.14■□□□□ 0.33
PKP3-201ENST00000331563 PRPH2P23942 346 aa17.14■□□□□ 0.33
PKP3-201ENST00000331563 WDR5P61964 334 aaKnown RBP17.14■□□□□ 0.33
PKP3-201ENST00000331563 ILKQ13418 452 aa17.14■□□□□ 0.33
PKP3-201ENST00000331563 INSL4Q14641 139 aa17.14■□□□□ 0.33
PKP3-201ENST00000331563 PLA1AQ53H76 456 aa17.14■□□□□ 0.33
PKP3-201ENST00000331563 RNASE12Q5GAN4 147 aaKnown RBP17.14■□□□□ 0.33
PKP3-201ENST00000331563 TMEM201Q5SNT2 666 aa17.14■□□□□ 0.33
PKP3-201ENST00000331563 GPRC6AQ5T6X5 926 aa17.14■□□□□ 0.33
PKP3-201ENST00000331563 CNKSR3Q6P9H4 555 aa17.14■□□□□ 0.33
PKP3-201ENST00000331563 KIAA0907Q7Z7F0 614 aaPredicted RBP17.14■□□□□ 0.33
PKP3-201ENST00000331563 FTMTQ8N4E7 242 aa17.14■□□□□ 0.33
PKP3-201ENST00000331563 SLC5A11Q8WWX8 675 aa17.14■□□□□ 0.33
PKP3-201ENST00000331563 PRR14Q9BWN1 585 aa17.14■□□□□ 0.33
PKP3-201ENST00000331563 SPRTNQ9H040 489 aaPredicted RBP17.14■□□□□ 0.33
PKP3-201ENST00000331563 RDH14Q9HBH5 336 aa17.14■□□□□ 0.33
PKP3-201ENST00000331563 ZNF334Q9HCZ1 680 aaPredicted RBP17.14■□□□□ 0.33
PKP3-201ENST00000331563 COPZ2Q9P299 210 aa17.14■□□□□ 0.33
PKP3-201ENST00000331563 CLCA2Q9UQC9 943 aa17.14■□□□□ 0.33
PKP3-201ENST00000331563 TMEM5Q9Y2B1 443 aa17.14■□□□□ 0.33
PKP3-201ENST00000331563 MYOFQ9NZM1 2061 aa17.14■□□□□ 0.33
PKP3-201ENST00000331563 EFEMP2O95967 443 aa17.14■□□□□ 0.33
PKP3-201ENST00000331563 GABRA5P31644 462 aa17.14■□□□□ 0.33
PKP3-201ENST00000331563 SOAT1P35610 550 aa17.14■□□□□ 0.33
PKP3-201ENST00000331563 SRP9P49458 86 aaKnown RBP17.14■□□□□ 0.33
PKP3-201ENST00000331563 RING1Q06587 406 aa17.14■□□□□ 0.33
PKP3-201ENST00000331563 DCST1Q5T197 706 aa17.14■□□□□ 0.33
PKP3-201ENST00000331563 CD276Q5ZPR3 534 aa17.14■□□□□ 0.33
PKP3-201ENST00000331563 LRRC70Q7Z2Q7 622 aa17.14■□□□□ 0.33
PKP3-201ENST00000331563 PLA2G15Q8NCC3 412 aa17.14■□□□□ 0.33
PKP3-201ENST00000331563 OR8D4Q8NGM9 314 aa17.14■□□□□ 0.33
PKP3-201ENST00000331563 OR2T35Q8NGX2 323 aa17.14■□□□□ 0.33
PKP3-201ENST00000331563 ZNF558Q96NG5 402 aa17.14■□□□□ 0.33
PKP3-201ENST00000331563 MAGEH1Q9H213 219 aa17.14■□□□□ 0.33
PKP3-201ENST00000331563 DPAGT1Q9H3H5 408 aa17.14■□□□□ 0.33
PKP3-201ENST00000331563 RC3H2Q9HBD1 1191 aaKnown RBP17.14■□□□□ 0.33
PKP3-201ENST00000331563 GPATCH2Q9NW75 528 aa17.14■□□□□ 0.33
PKP3-201ENST00000331563 BTNL2Q9UIR0 455 aa17.14■□□□□ 0.33
PKP3-201ENST00000331563 STK25O00506 426 aa17.13■□□□□ 0.33
PKP3-201ENST00000331563 ABLIM3O94929 683 aa17.13■□□□□ 0.33
PKP3-201ENST00000331563 PTBP1P26599 531 aaKnown RBP eCLIP17.13■□□□□ 0.33
PKP3-201ENST00000331563 CSKP41240 450 aa17.13■□□□□ 0.33
PKP3-201ENST00000331563 SLC11A2P49281 568 aa17.13■□□□□ 0.33
PKP3-201ENST00000331563 TMEM150AQ86TG1 271 aa17.13■□□□□ 0.33
PKP3-201ENST00000331563 EID2BQ96D98 161 aa17.13■□□□□ 0.33
PKP3-201ENST00000331563 SCMH1Q96GD3 660 aa17.13■□□□□ 0.33
PKP3-201ENST00000331563 ERMAPQ96PL5 475 aaPredicted RBP17.13■□□□□ 0.33
PKP3-201ENST00000331563 SORBS1Q9BX66 1292 aaKnown RBP17.13■□□□□ 0.33
PKP3-201ENST00000331563 SEMA3GQ9NS98 782 aa17.13■□□□□ 0.33
PKP3-201ENST00000331563 H3BNC9 293 aa17.13■□□□□ 0.33
PKP3-201ENST00000331563 SH3BP5O60239 455 aa17.13■□□□□ 0.33
PKP3-201ENST00000331563 CLTBP09497 229 aa17.13■□□□□ 0.33
PKP3-201ENST00000331563 PSMA3P25788 255 aa17.13■□□□□ 0.33
PKP3-201ENST00000331563 HBA1P69905 142 aa17.13■□□□□ 0.33
PKP3-201ENST00000331563 SLC39A11Q8N1S5 342 aa17.13■□□□□ 0.33
PKP3-201ENST00000331563 OR5T2Q8NGG2 359 aa17.13■□□□□ 0.33
PKP3-201ENST00000331563 MYO19Q96H55 970 aa17.13■□□□□ 0.33
PKP3-201ENST00000331563 SMG9Q9H0W8 520 aaKnown RBP17.13■□□□□ 0.33
PKP3-201ENST00000331563 CD8B2A6NJW9 211 aa17.12■□□□□ 0.33
PKP3-201ENST00000331563 SLC19A2O60779 497 aa17.12■□□□□ 0.33
PKP3-201ENST00000331563 C6orf47O95873 294 aa17.12■□□□□ 0.33
PKP3-201ENST00000331563 SOD1P00441 154 aa17.12■□□□□ 0.33
PKP3-201ENST00000331563 GLAP06280 429 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms