RNA–Protein interactions for RNA: ENST00000330295.9

CTHRC1-201, Transcript of collagen triple helix repeat containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTHRC1, Length 1,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-201ENST00000330295 CD8AP01732 235 aa13.29□□□□□ -0.28
CTHRC1-201ENST00000330295 LTA4HP09960 611 aaKnown RBP13.29□□□□□ -0.28
CTHRC1-201ENST00000330295 RHOXF2BP0C7M4 288 aa13.29□□□□□ -0.28
CTHRC1-201ENST00000330295 USF1P22415 310 aaPredicted RBP13.29□□□□□ -0.28
CTHRC1-201ENST00000330295 CNTFP26441 200 aa13.29□□□□□ -0.28
CTHRC1-201ENST00000330295 PTPN6P29350 595 aa13.29□□□□□ -0.28
CTHRC1-201ENST00000330295 TYK2P29597 1187 aa13.29□□□□□ -0.28
CTHRC1-201ENST00000330295 SERPINB8P50452 374 aa13.29□□□□□ -0.28
CTHRC1-201ENST00000330295 FUT7Q11130 342 aa13.29□□□□□ -0.28
CTHRC1-201ENST00000330295 TGFBIQ15582 683 aa13.29□□□□□ -0.28
CTHRC1-201ENST00000330295 TOR1AIP1Q5JTV8 583 aa13.29□□□□□ -0.28
CTHRC1-201ENST00000330295 TIGD3Q6B0B8 471 aa13.29□□□□□ -0.28
CTHRC1-201ENST00000330295 TRMT10CQ7L0Y3 403 aaKnown RBP13.29□□□□□ -0.28
CTHRC1-201ENST00000330295 TRIM42Q8IWZ5 723 aa13.29□□□□□ -0.28
CTHRC1-201ENST00000330295 LRRC17Q8N6Y2 441 aa13.29□□□□□ -0.28
CTHRC1-201ENST00000330295 ANKRD53Q8N9V6 530 aa13.29□□□□□ -0.28
CTHRC1-201ENST00000330295 NEUROG1Q92886 237 aa13.29□□□□□ -0.28
CTHRC1-201ENST00000330295 RNF166Q96A37 237 aaPredicted RBP13.29□□□□□ -0.28
CTHRC1-201ENST00000330295 MSI2Q96DH6 328 aaKnown RBP13.29□□□□□ -0.28
CTHRC1-201ENST00000330295 FAR2Q96K12 515 aa13.29□□□□□ -0.28
CTHRC1-201ENST00000330295 CSF3RQ99062 836 aa13.29□□□□□ -0.28
CTHRC1-201ENST00000330295 RHOXF2Q9BQY4 288 aa13.29□□□□□ -0.28
CTHRC1-201ENST00000330295 CDC42EP4Q9H3Q1 356 aaKnown RBP13.29□□□□□ -0.28
CTHRC1-201ENST00000330295 PELI2Q9HAT8 420 aa13.29□□□□□ -0.28
CTHRC1-201ENST00000330295 RYDENQ9NUL5 291 aaKnown RBP13.29□□□□□ -0.28
CTHRC1-201ENST00000330295 WWOXQ9NZC7 414 aa13.29□□□□□ -0.28
CTHRC1-201ENST00000330295 HEY2Q9UBP5 337 aa13.29□□□□□ -0.28
CTHRC1-201ENST00000330295 NFU1Q9UMS0 254 aa13.29□□□□□ -0.28
CTHRC1-201ENST00000330295 A0A0G2JN53 185 aa13.28□□□□□ -0.28
CTHRC1-201ENST00000330295 TMEM89A2RUT3 159 aa13.28□□□□□ -0.28
CTHRC1-201ENST00000330295 NCF1BA6NI72 391 aaPredicted RBP13.28□□□□□ -0.28
CTHRC1-201ENST00000330295 NCF1CA8MVU1 366 aaPredicted RBP13.28□□□□□ -0.28
CTHRC1-201ENST00000330295 CYR61O00622 381 aa13.28□□□□□ -0.28
CTHRC1-201ENST00000330295 CLGNO14967 610 aa13.28□□□□□ -0.28
CTHRC1-201ENST00000330295 TMPRSS2O15393 492 aa13.28□□□□□ -0.28
CTHRC1-201ENST00000330295 EMC8O43402 210 aa13.28□□□□□ -0.28
CTHRC1-201ENST00000330295 WDR47O94967 919 aa13.28□□□□□ -0.28
CTHRC1-201ENST00000330295 IGKV3-11P04433 115 aa13.28□□□□□ -0.28
CTHRC1-201ENST00000330295 SERPINA6P08185 405 aa13.28□□□□□ -0.28
CTHRC1-201ENST00000330295 NCF1P14598 390 aaPredicted RBP13.28□□□□□ -0.28
CTHRC1-201ENST00000330295 CD1DP15813 335 aa13.28□□□□□ -0.28
CTHRC1-201ENST00000330295 GNAZP19086 355 aa13.28□□□□□ -0.28
CTHRC1-201ENST00000330295 EFTUD2Q15029 972 aaKnown RBP eCLIP13.28□□□□□ -0.28
CTHRC1-201ENST00000330295 RPS6KA2Q15349 733 aa13.28□□□□□ -0.28
CTHRC1-201ENST00000330295 EXOC3L2Q2M3D2 409 aa13.28□□□□□ -0.28
CTHRC1-201ENST00000330295 CR1LQ2VPA4 569 aa13.28□□□□□ -0.28
CTHRC1-201ENST00000330295 ZNF672Q499Z4 452 aaPredicted RBP13.28□□□□□ -0.28
CTHRC1-201ENST00000330295 DNAJC14Q6Y2X3 702 aaPredicted RBP13.28□□□□□ -0.28
CTHRC1-201ENST00000330295 KRT78Q8N1N4 520 aa13.28□□□□□ -0.28
CTHRC1-201ENST00000330295 SPATA6LQ8N4H0 392 aa13.28□□□□□ -0.28
CTHRC1-201ENST00000330295 SEMA6DQ8NFY4 1073 aa13.28□□□□□ -0.28
CTHRC1-201ENST00000330295 SPPL2AQ8TCT8 520 aa13.28□□□□□ -0.28
CTHRC1-201ENST00000330295 RHBDF1Q96CC6 855 aa13.28□□□□□ -0.28
CTHRC1-201ENST00000330295 SENP5Q96HI0 755 aaPredicted RBP13.28□□□□□ -0.28
CTHRC1-201ENST00000330295 TMEM41AQ96HV5 264 aa13.28□□□□□ -0.28
CTHRC1-201ENST00000330295 UBXN10Q96LJ8 280 aa13.28□□□□□ -0.28
CTHRC1-201ENST00000330295 TSNARE1Q96NA8 513 aa13.28□□□□□ -0.28
CTHRC1-201ENST00000330295 FUT8Q9BYC5 575 aa13.28□□□□□ -0.28
CTHRC1-201ENST00000330295 GRIP2Q9C0E4 1043 aa13.28□□□□□ -0.28
CTHRC1-201ENST00000330295 PRM3Q9NNZ6 103 aa13.28□□□□□ -0.28
CTHRC1-201ENST00000330295 TEX10Q9NXF1 929 aaPredicted RBP13.28□□□□□ -0.28
CTHRC1-201ENST00000330295 SLC22A14Q9Y267 594 aa13.28□□□□□ -0.28
CTHRC1-201ENST00000330295 B3GALT5Q9Y2C3 310 aa13.28□□□□□ -0.28
CTHRC1-201ENST00000330295 GNB5O14775 395 aa13.27□□□□□ -0.29
CTHRC1-201ENST00000330295 B3GALT2O43825 422 aa13.27□□□□□ -0.29
CTHRC1-201ENST00000330295 STK16O75716 305 aa13.27□□□□□ -0.29
CTHRC1-201ENST00000330295 WISP3O95389 354 aaPredicted RBP13.27□□□□□ -0.29
CTHRC1-201ENST00000330295 HPDP32754 393 aaPredicted RBP13.27□□□□□ -0.29
CTHRC1-201ENST00000330295 STARP49675 285 aa13.27□□□□□ -0.29
CTHRC1-201ENST00000330295 LHX2P50458 406 aa13.27□□□□□ -0.29
CTHRC1-201ENST00000330295 SERTAD2Q14140 314 aa13.27□□□□□ -0.29
CTHRC1-201ENST00000330295 NXPE4Q6UWF7 544 aa13.27□□□□□ -0.29
CTHRC1-201ENST00000330295 CMC1Q7Z7K0 106 aa13.27□□□□□ -0.29
CTHRC1-201ENST00000330295 ZNF525Q8N782 197 aa13.27□□□□□ -0.29
CTHRC1-201ENST00000330295 EIF1ADQ8N9N8 165 aaKnown RBP13.27□□□□□ -0.29
CTHRC1-201ENST00000330295 SNX31Q8N9S9 440 aa13.27□□□□□ -0.29
CTHRC1-201ENST00000330295 TTLQ8NG68 377 aa13.27□□□□□ -0.29
CTHRC1-201ENST00000330295 OR1J4Q8NGS1 313 aa13.27□□□□□ -0.29
CTHRC1-201ENST00000330295 PROX1Q92786 737 aa13.27□□□□□ -0.29
CTHRC1-201ENST00000330295 NEIL2Q969S2 332 aa13.27□□□□□ -0.29
CTHRC1-201ENST00000330295 TP53INP1Q96A56 240 aa13.27□□□□□ -0.29
CTHRC1-201ENST00000330295 GAL3ST4Q96RP7 486 aa13.27□□□□□ -0.29
CTHRC1-201ENST00000330295 PITHD1Q9GZP4 211 aaPredicted RBP13.27□□□□□ -0.29
CTHRC1-201ENST00000330295 ALG9Q9H6U8 611 aa13.27□□□□□ -0.29
CTHRC1-201ENST00000330295 DNAJC11Q9NVH1 559 aa13.27□□□□□ -0.29
CTHRC1-201ENST00000330295 GPRC5BQ9NZH0 403 aa13.27□□□□□ -0.29
CTHRC1-201ENST00000330295 NUDT4Q9NZJ9 180 aa13.27□□□□□ -0.29
CTHRC1-201ENST00000330295 PTBP2Q9UKA9 531 aaKnown RBP13.27□□□□□ -0.29
CTHRC1-201ENST00000330295 IKZF3Q9UKT9 509 aa13.27□□□□□ -0.29
CTHRC1-201ENST00000330295 PROCRQ9UNN8 238 aa13.27□□□□□ -0.29
CTHRC1-201ENST00000330295 VWFP04275 2813 aa13.27□□□□□ -0.29
CTHRC1-201ENST00000330295 A0A096LPK6 155 aa13.26□□□□□ -0.29
CTHRC1-201ENST00000330295 A0A0A6YYJ9 748 aa13.26□□□□□ -0.29
CTHRC1-201ENST00000330295 EXOC1LA0A1B0GW35 172 aa13.26□□□□□ -0.29
CTHRC1-201ENST00000330295 SLC22A20A6NK97 555 aa13.26□□□□□ -0.29
CTHRC1-201ENST00000330295 SUPT3HB4E1H0 165 aa13.26□□□□□ -0.29
CTHRC1-201ENST00000330295 FAM157AC9JC47 383 aa13.26□□□□□ -0.29
CTHRC1-201ENST00000330295 POC1B-GALNT4F8VUJ3 575 aa13.26□□□□□ -0.29
CTHRC1-201ENST00000330295 SLCO1B7G3V0H7 640 aa13.26□□□□□ -0.29
CTHRC1-201ENST00000330295 KERAO60938 352 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms