RNA–Protein interactions for RNA: ENST00000328159.8

TPM3-205, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,771 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-205ENST00000328159 CWF19L1Q69YN2 538 aaKnown RBP13.96□□□□□ -0.17
TPM3-205ENST00000328159 SLC35F3Q8IY50 421 aa13.96□□□□□ -0.17
TPM3-205ENST00000328159 OR6C4Q8NGE1 309 aa13.96□□□□□ -0.17
TPM3-205ENST00000328159 HRASLS5Q96KN8 279 aa13.96□□□□□ -0.17
TPM3-205ENST00000328159 PIGUQ9H490 435 aa13.96□□□□□ -0.17
TPM3-205ENST00000328159 TRIM45Q9H8W5 580 aaPredicted RBP13.96□□□□□ -0.17
TPM3-205ENST00000328159 ADAP2Q9NPF8 381 aa13.96□□□□□ -0.17
TPM3-205ENST00000328159 A4GNTQ9UNA3 340 aa13.96□□□□□ -0.17
TPM3-205ENST00000328159 IGHV1OR21-1A0A087WYE8 117 aa13.96□□□□□ -0.18
TPM3-205ENST00000328159 BLACEA4D250 179 aa13.96□□□□□ -0.18
TPM3-205ENST00000328159 CCDC160A6NGH7 325 aa13.96□□□□□ -0.18
TPM3-205ENST00000328159 H3BSA7 217 aa13.96□□□□□ -0.18
TPM3-205ENST00000328159 ZIC2O95409 532 aaPredicted RBP13.96□□□□□ -0.18
TPM3-205ENST00000328159 PDGFBP01127 241 aaPredicted RBP13.96□□□□□ -0.18
TPM3-205ENST00000328159 GIMD1P0DJR0 217 aa13.96□□□□□ -0.18
TPM3-205ENST00000328159 PAX7P23759 505 aa13.96□□□□□ -0.18
TPM3-205ENST00000328159 ZXDAP98168 799 aa13.96□□□□□ -0.18
TPM3-205ENST00000328159 BNC1Q01954 994 aa13.96□□□□□ -0.18
TPM3-205ENST00000328159 MAD2L1BPQ15013 274 aaPredicted RBP13.96□□□□□ -0.18
TPM3-205ENST00000328159 SHBQ15464 509 aa13.96□□□□□ -0.18
TPM3-205ENST00000328159 INAVAQ3KP66 663 aa13.96□□□□□ -0.18
TPM3-205ENST00000328159 ARHGAP11BQ3KRB8 267 aa13.96□□□□□ -0.18
TPM3-205ENST00000328159 MLIPQ5VWP3 458 aa13.96□□□□□ -0.18
TPM3-205ENST00000328159 ZNF770Q6IQ21 691 aaPredicted RBP13.96□□□□□ -0.18
TPM3-205ENST00000328159 KCTD8Q6ZWB6 473 aa13.96□□□□□ -0.18
TPM3-205ENST00000328159 GPR141Q7Z602 305 aa13.96□□□□□ -0.18
TPM3-205ENST00000328159 VRK2Q86Y07 508 aa13.96□□□□□ -0.18
TPM3-205ENST00000328159 CCDC71Q8IV32 467 aaPredicted RBP13.96□□□□□ -0.18
TPM3-205ENST00000328159 AQP11Q8NBQ7 271 aa13.96□□□□□ -0.18
TPM3-205ENST00000328159 ADAMTS18Q8TE60 1221 aa13.96□□□□□ -0.18
TPM3-205ENST00000328159 ZNF566Q969W8 418 aa13.96□□□□□ -0.18
TPM3-205ENST00000328159 TSC22D3Q99576 134 aa13.96□□□□□ -0.18
TPM3-205ENST00000328159 ELF4Q99607 663 aaPredicted RBP13.96□□□□□ -0.18
TPM3-205ENST00000328159 RBCK1Q9BYM8 510 aa13.96□□□□□ -0.18
TPM3-205ENST00000328159 SPRTNQ9H040 489 aaPredicted RBP13.96□□□□□ -0.18
TPM3-205ENST00000328159 MRPS33Q9Y291 106 aaKnown RBP13.96□□□□□ -0.18
TPM3-205ENST00000328159 CEPT1Q9Y6K0 416 aa13.96□□□□□ -0.18
TPM3-205ENST00000328159 TNRC6BQ9UPQ9 1833 aaKnown RBP13.95□□□□□ -0.18
TPM3-205ENST00000328159 FAAHO00519 579 aa13.95□□□□□ -0.18
TPM3-205ENST00000328159 OR10H2O60403 315 aa13.95□□□□□ -0.18
TPM3-205ENST00000328159 FCMRO60667 390 aa13.95□□□□□ -0.18
TPM3-205ENST00000328159 ABCB7O75027 752 aa13.95□□□□□ -0.18
TPM3-205ENST00000328159 UGT2B17O75795 530 aa13.95□□□□□ -0.18
TPM3-205ENST00000328159 OXSR1O95747 527 aaPredicted RBP13.95□□□□□ -0.18
TPM3-205ENST00000328159 ANGPTL1O95841 491 aa13.95□□□□□ -0.18
TPM3-205ENST00000328159 ALOX5P09917 674 aa13.95□□□□□ -0.18
TPM3-205ENST00000328159 CT62P0C5K7 136 aa13.95□□□□□ -0.18
TPM3-205ENST00000328159 CCDC159P0C7I6 412 aa13.95□□□□□ -0.18
TPM3-205ENST00000328159 ELAVL4P26378 380 aaKnown RBP13.95□□□□□ -0.18
TPM3-205ENST00000328159 AVPR1BP47901 424 aa13.95□□□□□ -0.18
TPM3-205ENST00000328159 ARRB1P49407 418 aaPredicted RBP13.95□□□□□ -0.18
TPM3-205ENST00000328159 MAT1AQ00266 395 aaKnown RBP13.95□□□□□ -0.18
TPM3-205ENST00000328159 PIN1Q13526 163 aaPredicted RBP13.95□□□□□ -0.18
TPM3-205ENST00000328159 EXOSC7Q15024 291 aaKnown RBP13.95□□□□□ -0.18
TPM3-205ENST00000328159 DCST1Q5T197 706 aa13.95□□□□□ -0.18
TPM3-205ENST00000328159 PRPF38BQ5VTL8 546 aaKnown RBP13.95□□□□□ -0.18
TPM3-205ENST00000328159 DHRS4L2Q6PKH6 230 aa13.95□□□□□ -0.18
TPM3-205ENST00000328159 FRRS1Q6ZNA5 592 aa13.95□□□□□ -0.18
TPM3-205ENST00000328159 Q6ZPB1 254 aaPredicted RBP13.95□□□□□ -0.18
TPM3-205ENST00000328159 B3GNT8Q7Z7M8 397 aa13.95□□□□□ -0.18
TPM3-205ENST00000328159 WDR5BQ86VZ2 330 aa13.95□□□□□ -0.18
TPM3-205ENST00000328159 BPIFB6Q8NFQ5 453 aa13.95□□□□□ -0.18
TPM3-205ENST00000328159 OR6T1Q8NGN1 323 aa13.95□□□□□ -0.18
TPM3-205ENST00000328159 GTPBP3Q969Y2 492 aaKnown RBP13.95□□□□□ -0.18
TPM3-205ENST00000328159 CTHRC1Q96CG8 243 aa13.95□□□□□ -0.18
TPM3-205ENST00000328159 ZG16BQ96DA0 208 aa13.95□□□□□ -0.18
TPM3-205ENST00000328159 PEX11GQ96HA9 241 aa13.95□□□□□ -0.18
TPM3-205ENST00000328159 ARHGDIGQ99819 225 aa13.95□□□□□ -0.18
TPM3-205ENST00000328159 FUZQ9BT04 418 aa13.95□□□□□ -0.18
TPM3-205ENST00000328159 POLR1BQ9H9Y6 1135 aa13.95□□□□□ -0.18
TPM3-205ENST00000328159 SLC13A4Q9UKG4 626 aa13.95□□□□□ -0.18
TPM3-205ENST00000328159 PCDHGA6Q9Y5G7 932 aa13.95□□□□□ -0.18
TPM3-205ENST00000328159 CACNA1EQ15878 2313 aa13.94□□□□□ -0.18
TPM3-205ENST00000328159 FITM1A5D6W6 292 aa13.94□□□□□ -0.18
TPM3-205ENST00000328159 DUX1O43812 170 aa13.94□□□□□ -0.18
TPM3-205ENST00000328159 CTNSO60931 367 aa13.94□□□□□ -0.18
TPM3-205ENST00000328159 GASTP01350 101 aa13.94□□□□□ -0.18
TPM3-205ENST00000328159 POU2F1P14859 743 aa13.94□□□□□ -0.18
TPM3-205ENST00000328159 GNSP15586 552 aa13.94□□□□□ -0.18
TPM3-205ENST00000328159 GLB1P16278 677 aa13.94□□□□□ -0.18
TPM3-205ENST00000328159 PRKAR1BP31321 381 aa13.94□□□□□ -0.18
TPM3-205ENST00000328159 GGT2P36268 569 aa13.94□□□□□ -0.18
TPM3-205ENST00000328159 GPR3P46089 330 aa13.94□□□□□ -0.18
TPM3-205ENST00000328159 SLC13A2Q13183 592 aa13.94□□□□□ -0.18
TPM3-205ENST00000328159 GRM7Q14831 915 aa13.94□□□□□ -0.18
TPM3-205ENST00000328159 SEC23BQ15437 767 aa13.94□□□□□ -0.18
TPM3-205ENST00000328159 NPTX1Q15818 432 aa13.94□□□□□ -0.18
TPM3-205ENST00000328159 ZBED5Q49AG3 693 aa13.94□□□□□ -0.18
TPM3-205ENST00000328159 PMS2CLQ68D20 193 aa13.94□□□□□ -0.18
TPM3-205ENST00000328159 TYW3Q6IPR3 259 aaKnown RBP13.94□□□□□ -0.18
TPM3-205ENST00000328159 ZCCHC12Q6PEW1 402 aa13.94□□□□□ -0.18
TPM3-205ENST00000328159 DGAT2L6Q6ZPD8 337 aa13.94□□□□□ -0.18
TPM3-205ENST00000328159 PLXDC1Q8IUK5 500 aa13.94□□□□□ -0.18
TPM3-205ENST00000328159 ZNF595Q8IYB9 648 aa13.94□□□□□ -0.18
TPM3-205ENST00000328159 CARFQ8N187 725 aa13.94□□□□□ -0.18
TPM3-205ENST00000328159 PARP8Q8N3A8 854 aa13.94□□□□□ -0.18
TPM3-205ENST00000328159 Q8N9G6 341 aaPredicted RBP13.94□□□□□ -0.18
TPM3-205ENST00000328159 CDRT4Q8N9R6 151 aa13.94□□□□□ -0.18
TPM3-205ENST00000328159 OR52P1PQ8NH57 321 aa13.94□□□□□ -0.18
TPM3-205ENST00000328159 SGCDQ92629 289 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms