RNA–Protein interactions for RNA: ENST00000327908.3

LRIT3-201, Transcript of leucine rich repeat, Ig-like and transmembrane domains 3, humanhuman

TSL 2 BASIC

Gene LRIT3, Length 3,781 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3-201ENST00000327908 CABIN1Q9Y6J0 2220 aa4.8□□□□□ -1.64
LRIT3-201ENST00000327908 A0A1B0GTL3 188 aa4.8□□□□□ -1.64
LRIT3-201ENST00000327908 SCDO00767 359 aa4.8□□□□□ -1.64
LRIT3-201ENST00000327908 NR2F1P10589 423 aa4.8□□□□□ -1.64
LRIT3-201ENST00000327908 FCGR1AP12314 374 aa4.8□□□□□ -1.64
LRIT3-201ENST00000327908 SLC6A2P23975 617 aa4.8□□□□□ -1.64
LRIT3-201ENST00000327908 FEN1P39748 380 aaKnown RBP4.8□□□□□ -1.64
LRIT3-201ENST00000327908 CYB561P49447 251 aa4.8□□□□□ -1.64
LRIT3-201ENST00000327908 SLC37A1P57057 533 aa4.8□□□□□ -1.64
LRIT3-201ENST00000327908 TLE3Q04726 772 aa4.8□□□□□ -1.64
LRIT3-201ENST00000327908 HSPB3Q12988 150 aa4.8□□□□□ -1.64
LRIT3-201ENST00000327908 ATP1A4Q13733 1029 aa4.8□□□□□ -1.64
LRIT3-201ENST00000327908 EBPQ15125 230 aaKnown RBP4.8□□□□□ -1.64
LRIT3-201ENST00000327908 VWA2Q5GFL6 755 aa4.8□□□□□ -1.64
LRIT3-201ENST00000327908 C1QTNF12Q5T7M4 302 aa4.8□□□□□ -1.64
LRIT3-201ENST00000327908 CES4AQ5XG92 561 aa4.8□□□□□ -1.64
LRIT3-201ENST00000327908 REEP3Q6NUK4 255 aa4.8□□□□□ -1.64
LRIT3-201ENST00000327908 DHRS4L2Q6PKH6 230 aa4.8□□□□□ -1.64
LRIT3-201ENST00000327908 CCDC80Q76M96 950 aa4.8□□□□□ -1.64
LRIT3-201ENST00000327908 CCDC116Q8IYX3 515 aa4.8□□□□□ -1.64
LRIT3-201ENST00000327908 ZNF619Q8N2I2 560 aa4.8□□□□□ -1.64
LRIT3-201ENST00000327908 METTL27Q8N6F8 245 aaPredicted RBP4.8□□□□□ -1.64
LRIT3-201ENST00000327908 ZNF615Q8N8J6 731 aa4.8□□□□□ -1.64
LRIT3-201ENST00000327908 ZNF441Q8N8Z8 693 aa4.8□□□□□ -1.64
LRIT3-201ENST00000327908 HAS2Q92819 552 aa4.8□□□□□ -1.64
LRIT3-201ENST00000327908 LRRC58Q96CX6 371 aa4.8□□□□□ -1.64
LRIT3-201ENST00000327908 SPACA9Q96E40 222 aaPredicted RBP4.8□□□□□ -1.64
LRIT3-201ENST00000327908 TMEM41AQ96HV5 264 aa4.8□□□□□ -1.64
LRIT3-201ENST00000327908 THOC3Q96J01 351 aaKnown RBP4.8□□□□□ -1.64
LRIT3-201ENST00000327908 PAIP1Q9H074 479 aaKnown RBP4.8□□□□□ -1.64
LRIT3-201ENST00000327908 PTGES2Q9H7Z7 377 aa4.8□□□□□ -1.64
LRIT3-201ENST00000327908 UBQLN4Q9NRR5 601 aa4.8□□□□□ -1.64
LRIT3-201ENST00000327908 SAMD4AQ9UPU9 718 aaKnown RBP4.8□□□□□ -1.64
LRIT3-201ENST00000327908 ERVK-11Q9UQG0 969 aa4.8□□□□□ -1.64
LRIT3-201ENST00000327908 SLC9A8Q9Y2E8 581 aa4.8□□□□□ -1.64
LRIT3-201ENST00000327908 SNX8Q9Y5X2 465 aa4.8□□□□□ -1.64
LRIT3-201ENST00000327908 PCNX2A6NKB5 2137 aa4.8□□□□□ -1.64
LRIT3-201ENST00000327908 GJE1A6NN92 205 aa4.8□□□□□ -1.64
LRIT3-201ENST00000327908 PGRMC2O15173 223 aa4.8□□□□□ -1.64
LRIT3-201ENST00000327908 FMO6PO60774 539 aa4.8□□□□□ -1.64
LRIT3-201ENST00000327908 LRATO95237 230 aa4.8□□□□□ -1.64
LRIT3-201ENST00000327908 JUNP05412 331 aaKnown RBP4.8□□□□□ -1.64
LRIT3-201ENST00000327908 TACR1P25103 407 aa4.8□□□□□ -1.64
LRIT3-201ENST00000327908 WNT3P56703 355 aa4.8□□□□□ -1.64
LRIT3-201ENST00000327908 PSME3P61289 254 aa4.8□□□□□ -1.64
LRIT3-201ENST00000327908 YBX1P67809 324 aaKnown RBP4.8□□□□□ -1.64
LRIT3-201ENST00000327908 RBPJQ06330 500 aa4.8□□□□□ -1.64
LRIT3-201ENST00000327908 FGFBP1Q14512 234 aa4.8□□□□□ -1.64
LRIT3-201ENST00000327908 NTRK2Q16620 822 aa4.8□□□□□ -1.64
LRIT3-201ENST00000327908 EIF2S3LQ2VIR3 472 aaKnown RBP4.8□□□□□ -1.64
LRIT3-201ENST00000327908 CGB2Q6NT52 195 aa4.8□□□□□ -1.64
LRIT3-201ENST00000327908 OR9A2Q8NGT5 310 aa4.8□□□□□ -1.64
LRIT3-201ENST00000327908 PTPMT1Q8WUK0 201 aaPredicted RBP4.8□□□□□ -1.64
LRIT3-201ENST00000327908 TSLPQ969D9 159 aa4.8□□□□□ -1.64
LRIT3-201ENST00000327908 ZNF597Q96LX8 424 aa4.8□□□□□ -1.64
LRIT3-201ENST00000327908 LRGUKQ96M69 825 aa4.8□□□□□ -1.64
LRIT3-201ENST00000327908 VSTM2LQ96N03 204 aa4.8□□□□□ -1.64
LRIT3-201ENST00000327908 HBEGFQ99075 208 aa4.8□□□□□ -1.64
LRIT3-201ENST00000327908 FAM173AQ9BQD7 235 aa4.8□□□□□ -1.64
LRIT3-201ENST00000327908 SORBS1Q9BX66 1292 aaKnown RBP4.8□□□□□ -1.64
LRIT3-201ENST00000327908 PINK1Q9BXM7 581 aa4.8□□□□□ -1.64
LRIT3-201ENST00000327908 RASSF4Q9H2L5 321 aa4.8□□□□□ -1.64
LRIT3-201ENST00000327908 ZNF395Q9H8N7 513 aaPredicted RBP4.8□□□□□ -1.64
LRIT3-201ENST00000327908 ZNF160Q9HCG1 818 aa4.8□□□□□ -1.64
LRIT3-201ENST00000327908 C8orf4Q9NR00 106 aa4.8□□□□□ -1.64
LRIT3-201ENST00000327908 OR5H15A6NDH6 313 aa4.79□□□□□ -1.64
LRIT3-201ENST00000327908 C4orf51C9J302 202 aa4.79□□□□□ -1.64
LRIT3-201ENST00000327908 GYG2O15488 501 aa4.79□□□□□ -1.64
LRIT3-201ENST00000327908 HCRTR1O43613 425 aa4.79□□□□□ -1.64
LRIT3-201ENST00000327908 RRP9O43818 475 aaKnown RBP4.79□□□□□ -1.64
LRIT3-201ENST00000327908 MED26O95402 600 aa4.79□□□□□ -1.64
LRIT3-201ENST00000327908 THRBP10828 461 aa4.79□□□□□ -1.64
LRIT3-201ENST00000327908 MAOAP21397 527 aa4.79□□□□□ -1.64
LRIT3-201ENST00000327908 TBXA2RP21731 343 aa4.79□□□□□ -1.64
LRIT3-201ENST00000327908 PIGAP37287 484 aa4.79□□□□□ -1.64
LRIT3-201ENST00000327908 EIF1P41567 113 aaKnown RBP4.79□□□□□ -1.64
LRIT3-201ENST00000327908 CLK1P49759 484 aaKnown RBP4.79□□□□□ -1.64
LRIT3-201ENST00000327908 NUDT2P50583 147 aa4.79□□□□□ -1.64
LRIT3-201ENST00000327908 ATP12AP54707 1039 aa4.79□□□□□ -1.64
LRIT3-201ENST00000327908 SLC22A10Q63ZE4 541 aa4.79□□□□□ -1.64
LRIT3-201ENST00000327908 HEPHL1Q6MZM0 1159 aa4.79□□□□□ -1.64
LRIT3-201ENST00000327908 PRSS41Q7RTY9 318 aa4.79□□□□□ -1.64
LRIT3-201ENST00000327908 MICU2Q8IYU8 434 aa4.79□□□□□ -1.64
LRIT3-201ENST00000327908 SLC43A2Q8N370 569 aa4.79□□□□□ -1.64
LRIT3-201ENST00000327908 SLC38A9Q8NBW4 561 aa4.79□□□□□ -1.64
LRIT3-201ENST00000327908 FAM110BQ8TC76 370 aa4.79□□□□□ -1.64
LRIT3-201ENST00000327908 GPR151Q8TDV0 419 aa4.79□□□□□ -1.64
LRIT3-201ENST00000327908 SLC26A7Q8TE54 656 aa4.79□□□□□ -1.64
LRIT3-201ENST00000327908 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.79□□□□□ -1.64
LRIT3-201ENST00000327908 THUMPD3Q9BV44 507 aaKnown RBP4.79□□□□□ -1.64
LRIT3-201ENST00000327908 TMEM121BQ9BXQ6 578 aaPredicted RBP4.79□□□□□ -1.64
LRIT3-201ENST00000327908 SAP130Q9H0E3 1048 aa4.79□□□□□ -1.64
LRIT3-201ENST00000327908 ING2Q9H160 280 aa4.79□□□□□ -1.64
LRIT3-201ENST00000327908 OLAHQ9NV23 265 aa4.79□□□□□ -1.64
LRIT3-201ENST00000327908 PAQR5Q9NXK6 330 aaPredicted RBP4.79□□□□□ -1.64
LRIT3-201ENST00000327908 MYOTQ9UBF9 498 aa4.79□□□□□ -1.64
LRIT3-201ENST00000327908 ABCD2Q9UBJ2 740 aa4.79□□□□□ -1.64
LRIT3-201ENST00000327908 ANAPC2Q9UJX6 822 aa4.79□□□□□ -1.64
LRIT3-201ENST00000327908 MDC1Q14676 2089 aaKnown RBP4.79□□□□□ -1.64
LRIT3-201ENST00000327908 IGLV3-32A0A0A0MS00 114 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms