RNA–Protein interactions for RNA: ENST00000325110.10

HMGCS1-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS1, Length 3,506 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-201ENST00000325110 IFNGR2P38484 337 aa12.15□□□□□ -0.46
HMGCS1-201ENST00000325110 HMGA2P52926 109 aa12.15□□□□□ -0.46
HMGCS1-201ENST00000325110 CHRNEQ04844 493 aa12.15□□□□□ -0.46
HMGCS1-201ENST00000325110 MLLT11Q13015 90 aaPredicted RBP12.15□□□□□ -0.46
HMGCS1-201ENST00000325110 MRPL28Q13084 256 aaKnown RBP12.15□□□□□ -0.46
HMGCS1-201ENST00000325110 ELAVL3Q14576 367 aaKnown RBP12.15□□□□□ -0.46
HMGCS1-201ENST00000325110 ZNF234Q14588 700 aa12.15□□□□□ -0.46
HMGCS1-201ENST00000325110 CNIH2Q6PI25 160 aa12.15□□□□□ -0.46
HMGCS1-201ENST00000325110 PIGXQ8TBF5 258 aa12.15□□□□□ -0.46
HMGCS1-201ENST00000325110 COQ10AQ96MF6 247 aa12.15□□□□□ -0.46
HMGCS1-201ENST00000325110 SLC6A18Q96N87 628 aa12.15□□□□□ -0.46
HMGCS1-201ENST00000325110 SDHCQ99643 169 aaPredicted RBP12.15□□□□□ -0.46
HMGCS1-201ENST00000325110 ZNF624Q9P2J8 865 aaPredicted RBP12.15□□□□□ -0.46
HMGCS1-201ENST00000325110 TEKT2Q9UIF3 430 aa12.15□□□□□ -0.46
HMGCS1-201ENST00000325110 PLEKHM1Q9Y4G2 1056 aa12.15□□□□□ -0.46
HMGCS1-201ENST00000325110 SOD1P00441 154 aa12.15□□□□□ -0.47
HMGCS1-201ENST00000325110 MRPL3P09001 348 aaKnown RBP12.15□□□□□ -0.47
HMGCS1-201ENST00000325110 IFI30P13284 250 aa12.15□□□□□ -0.47
HMGCS1-201ENST00000325110 OPRD1P41143 372 aa12.15□□□□□ -0.47
HMGCS1-201ENST00000325110 LRRC32Q14392 662 aa12.15□□□□□ -0.47
HMGCS1-201ENST00000325110 LTB4RQ15722 352 aa12.15□□□□□ -0.47
HMGCS1-201ENST00000325110 TOR1AIP1Q5JTV8 583 aa12.15□□□□□ -0.47
HMGCS1-201ENST00000325110 SLC36A4Q6YBV0 504 aa12.15□□□□□ -0.47
HMGCS1-201ENST00000325110 COMTD1Q86VU5 262 aa12.15□□□□□ -0.47
HMGCS1-201ENST00000325110 NRMQ8IXM6 262 aa12.15□□□□□ -0.47
HMGCS1-201ENST00000325110 OR9A2Q8NGT5 310 aa12.15□□□□□ -0.47
HMGCS1-201ENST00000325110 LRIG1Q96JA1 1093 aa12.15□□□□□ -0.47
HMGCS1-201ENST00000325110 DPEP2Q9H4A9 486 aa12.15□□□□□ -0.47
HMGCS1-201ENST00000325110 TRIM45Q9H8W5 580 aaPredicted RBP12.15□□□□□ -0.47
HMGCS1-201ENST00000325110 ADAP2Q9NPF8 381 aa12.15□□□□□ -0.47
HMGCS1-201ENST00000325110 CXXC1Q9P0U4 656 aaPredicted RBP12.15□□□□□ -0.47
HMGCS1-201ENST00000325110 AP1M2Q9Y6Q5 423 aa12.15□□□□□ -0.47
HMGCS1-201ENST00000325110 SCN2AQ99250 2005 aa12.15□□□□□ -0.47
HMGCS1-201ENST00000325110 FRMPD3Q5JV73 1810 aa12.14□□□□□ -0.47
HMGCS1-201ENST00000325110 GUCY1B2O75343 617 aa12.14□□□□□ -0.47
HMGCS1-201ENST00000325110 RECKO95980 971 aa12.14□□□□□ -0.47
HMGCS1-201ENST00000325110 CHRM4P08173 479 aa12.14□□□□□ -0.47
HMGCS1-201ENST00000325110 SDHBP21912 280 aa12.14□□□□□ -0.47
HMGCS1-201ENST00000325110 ITGB8P26012 769 aa12.14□□□□□ -0.47
HMGCS1-201ENST00000325110 SRP54P61011 504 aaKnown RBP12.14□□□□□ -0.47
HMGCS1-201ENST00000325110 ZNF77Q15935 545 aa12.14□□□□□ -0.47
HMGCS1-201ENST00000325110 NDUFA5Q16718 116 aa12.14□□□□□ -0.47
HMGCS1-201ENST00000325110 THOC7Q6I9Y2 204 aaKnown RBP12.14□□□□□ -0.47
HMGCS1-201ENST00000325110 LILRA6Q6PI73 481 aa12.14□□□□□ -0.47
HMGCS1-201ENST00000325110 BHLHB9Q6PI77 547 aa12.14□□□□□ -0.47
HMGCS1-201ENST00000325110 IL20RBQ6UXL0 311 aa12.14□□□□□ -0.47
HMGCS1-201ENST00000325110 KLHDC8AQ8IYD2 350 aa12.14□□□□□ -0.47
HMGCS1-201ENST00000325110 UBQLNLQ8IYU4 475 aa12.14□□□□□ -0.47
HMGCS1-201ENST00000325110 OR10H4Q8NGA5 316 aa12.14□□□□□ -0.47
HMGCS1-201ENST00000325110 PAWRQ96IZ0 340 aaKnown RBP12.14□□□□□ -0.47
HMGCS1-201ENST00000325110 LRRC3BQ96PB8 259 aa12.14□□□□□ -0.47
HMGCS1-201ENST00000325110 SERHL2Q9H4I8 314 aa12.14□□□□□ -0.47
HMGCS1-201ENST00000325110 WDR26Q9H7D7 661 aa12.14□□□□□ -0.47
HMGCS1-201ENST00000325110 TRPV5Q9NQA5 729 aa12.14□□□□□ -0.47
HMGCS1-201ENST00000325110 A4GNTQ9UNA3 340 aa12.14□□□□□ -0.47
HMGCS1-201ENST00000325110 ATG4BQ9Y4P1 393 aa12.14□□□□□ -0.47
HMGCS1-201ENST00000325110 ZNF780BQ9Y6R6 833 aa12.14□□□□□ -0.47
HMGCS1-201ENST00000325110 SCN8AQ9UQD0 1980 aa12.14□□□□□ -0.47
HMGCS1-201ENST00000325110 ALPK2Q86TB3 2170 aa12.14□□□□□ -0.47
HMGCS1-201ENST00000325110 A0A087WUU8 490 aa12.14□□□□□ -0.47
HMGCS1-201ENST00000325110 TAS2R38P59533 333 aa12.14□□□□□ -0.47
HMGCS1-201ENST00000325110 BTN3A2P78410 334 aa12.14□□□□□ -0.47
HMGCS1-201ENST00000325110 IFITM2Q01629 132 aa12.14□□□□□ -0.47
HMGCS1-201ENST00000325110 SGCGQ13326 291 aa12.14□□□□□ -0.47
HMGCS1-201ENST00000325110 ZNF79Q15937 498 aa12.14□□□□□ -0.47
HMGCS1-201ENST00000325110 WSCD2Q2TBF2 565 aa12.14□□□□□ -0.47
HMGCS1-201ENST00000325110 HNRNPA1L2Q32P51 320 aaKnown RBP12.14□□□□□ -0.47
HMGCS1-201ENST00000325110 ARL9Q6T311 187 aa12.14□□□□□ -0.47
HMGCS1-201ENST00000325110 GET4Q7L5D6 327 aaPredicted RBP12.14□□□□□ -0.47
HMGCS1-201ENST00000325110 TBC1D19Q8N5T2 526 aa12.14□□□□□ -0.47
HMGCS1-201ENST00000325110 OR6F1Q8NGZ6 308 aa12.14□□□□□ -0.47
HMGCS1-201ENST00000325110 AMDHD1Q96NU7 426 aa12.14□□□□□ -0.47
HMGCS1-201ENST00000325110 MCHR1Q99705 422 aa12.14□□□□□ -0.47
HMGCS1-201ENST00000325110 OR2B2Q9GZK3 357 aa12.14□□□□□ -0.47
HMGCS1-201ENST00000325110 OR52A5Q9H2C5 316 aa12.14□□□□□ -0.47
HMGCS1-201ENST00000325110 C3orf14Q9HBI5 128 aa12.14□□□□□ -0.47
HMGCS1-201ENST00000325110 A4GALTQ9NPC4 353 aa12.14□□□□□ -0.47
HMGCS1-201ENST00000325110 DKK3Q9UBP4 350 aa12.14□□□□□ -0.47
HMGCS1-201ENST00000325110 ZFR2Q9UPR6 939 aaKnown RBP12.14□□□□□ -0.47
HMGCS1-201ENST00000325110 EDDM13A0A1B0GTR0 161 aa12.14□□□□□ -0.47
HMGCS1-201ENST00000325110 A0A1W2PPK0 400 aa12.14□□□□□ -0.47
HMGCS1-201ENST00000325110 SMLR1H3BR10 107 aa12.14□□□□□ -0.47
HMGCS1-201ENST00000325110 GNB5O14775 395 aa12.14□□□□□ -0.47
HMGCS1-201ENST00000325110 EFEMP2O95967 443 aa12.14□□□□□ -0.47
HMGCS1-201ENST00000325110 CSNK2A2P19784 350 aaPredicted RBP12.14□□□□□ -0.47
HMGCS1-201ENST00000325110 ITGB7P26010 798 aa12.14□□□□□ -0.47
HMGCS1-201ENST00000325110 NOS3P29474 1203 aa12.14□□□□□ -0.47
HMGCS1-201ENST00000325110 SOX9P48436 509 aa12.14□□□□□ -0.47
HMGCS1-201ENST00000325110 SNRPGP62308 76 aaKnown RBP12.14□□□□□ -0.47
HMGCS1-201ENST00000325110 PRR5P85299 388 aa12.14□□□□□ -0.47
HMGCS1-201ENST00000325110 ELOAQ14241 798 aaKnown RBP12.14□□□□□ -0.47
HMGCS1-201ENST00000325110 FCRLBQ6BAA4 426 aa12.14□□□□□ -0.47
HMGCS1-201ENST00000325110 ZNF770Q6IQ21 691 aaPredicted RBP12.14□□□□□ -0.47
HMGCS1-201ENST00000325110 SRRQ9GZT4 340 aa12.14□□□□□ -0.47
HMGCS1-201ENST00000325110 MED20Q9H944 212 aa12.14□□□□□ -0.47
HMGCS1-201ENST00000325110 SIRT3Q9NTG7 399 aaPredicted RBP12.14□□□□□ -0.47
HMGCS1-201ENST00000325110 NOX1Q9Y5S8 564 aa12.14□□□□□ -0.47
HMGCS1-201ENST00000325110 THSD7BQ9C0I4 1608 aa12.13□□□□□ -0.47
HMGCS1-201ENST00000325110 A0A075B6Q4 140 aa12.13□□□□□ -0.47
HMGCS1-201ENST00000325110 LOC102723532A0A0G2JNH3 316 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms