RNA–Protein interactions for RNA: ENST00000323668.11

TCOF1-201, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCOF1, Length 4,832 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-201ENST00000323668 C12orf71A8MTZ7 269 aa13.95□□□□□ -0.18
TCOF1-201ENST00000323668 CTSAP10619 480 aa13.95□□□□□ -0.18
TCOF1-201ENST00000323668 CCSMST1Q4G0I0 132 aa13.95□□□□□ -0.18
TCOF1-201ENST00000323668 C2orf27AQ580R0 203 aa13.95□□□□□ -0.18
TCOF1-201ENST00000323668 OR2G6Q5TZ20 316 aa13.95□□□□□ -0.18
TCOF1-201ENST00000323668 ZSWIM3Q96MP5 696 aa13.95□□□□□ -0.18
TCOF1-201ENST00000323668 SNX18Q96RF0 628 aa13.95□□□□□ -0.18
TCOF1-201ENST00000323668 SLC6A13Q9NSD5 602 aa13.95□□□□□ -0.18
TCOF1-201ENST00000323668 SPATA6Q9NWH7 488 aaPredicted RBP13.95□□□□□ -0.18
TCOF1-201ENST00000323668 TAS2R10Q9NYW0 307 aa13.95□□□□□ -0.18
TCOF1-201ENST00000323668 A0A1W2PRQ8 180 aa13.94□□□□□ -0.18
TCOF1-201ENST00000323668 ADAM23O75077 832 aa13.94□□□□□ -0.18
TCOF1-201ENST00000323668 RPP14O95059 124 aaKnown RBP13.94□□□□□ -0.18
TCOF1-201ENST00000323668 RPS5P46782 204 aaKnown RBP13.94□□□□□ -0.18
TCOF1-201ENST00000323668 RPL6Q02878 288 aaKnown RBP13.94□□□□□ -0.18
TCOF1-201ENST00000323668 ATAD3CQ5T2N8 411 aa13.94□□□□□ -0.18
TCOF1-201ENST00000323668 PARS2Q7L3T8 475 aaKnown RBP13.94□□□□□ -0.18
TCOF1-201ENST00000323668 MEX3DQ86XN8 651 aaKnown RBP13.94□□□□□ -0.18
TCOF1-201ENST00000323668 SYT14Q8NB59 555 aa13.94□□□□□ -0.18
TCOF1-201ENST00000323668 LILRB4Q8NHJ6 448 aa13.94□□□□□ -0.18
TCOF1-201ENST00000323668 LYSMD1Q96S90 227 aa13.94□□□□□ -0.18
TCOF1-201ENST00000323668 SGIP1Q9BQI5 828 aa13.94□□□□□ -0.18
TCOF1-201ENST00000323668 GABARAPL3Q9BY60 117 aa13.94□□□□□ -0.18
TCOF1-201ENST00000323668 TLR9Q9NR96 1032 aa13.94□□□□□ -0.18
TCOF1-201ENST00000323668 MED11Q9P086 117 aa13.94□□□□□ -0.18
TCOF1-201ENST00000323668 ELOA3DA6NLF2 546 aaPredicted RBP13.94□□□□□ -0.18
TCOF1-201ENST00000323668 FAM25EA8MYX2 175 aa13.94□□□□□ -0.18
TCOF1-201ENST00000323668 CD2P06729 351 aa13.94□□□□□ -0.18
TCOF1-201ENST00000323668 BMP1P13497 986 aa13.94□□□□□ -0.18
TCOF1-201ENST00000323668 ACTC1P68032 377 aa13.94□□□□□ -0.18
TCOF1-201ENST00000323668 ACTA1P68133 377 aa13.94□□□□□ -0.18
TCOF1-201ENST00000323668 TAF13Q15543 124 aa13.94□□□□□ -0.18
TCOF1-201ENST00000323668 ELOA3BQ3SY89 546 aa13.94□□□□□ -0.18
TCOF1-201ENST00000323668 PTOV1Q86YD1 416 aa13.94□□□□□ -0.18
TCOF1-201ENST00000323668 MS4A15Q8N5U1 240 aa13.94□□□□□ -0.18
TCOF1-201ENST00000323668 LILRA3Q8N6C8 439 aaPredicted RBP13.94□□□□□ -0.18
TCOF1-201ENST00000323668 ELOA3Q8NG57 546 aa13.94□□□□□ -0.18
TCOF1-201ENST00000323668 PINK1Q9BXM7 581 aa13.94□□□□□ -0.18
TCOF1-201ENST00000323668 NEU3Q9UQ49 428 aa13.94□□□□□ -0.18
TCOF1-201ENST00000323668 CSNK1G3Q9Y6M4 447 aa13.94□□□□□ -0.18
TCOF1-201ENST00000323668 CNTRLQ7Z7A1 2325 aa13.94□□□□□ -0.18
TCOF1-201ENST00000323668 A0A1W2PPK0 400 aa13.94□□□□□ -0.18
TCOF1-201ENST00000323668 A0A1W2PRG6 482 aa13.94□□□□□ -0.18
TCOF1-201ENST00000323668 FAM227AF5H4B4 570 aa13.94□□□□□ -0.18
TCOF1-201ENST00000323668 PRSS23O95084 383 aa13.94□□□□□ -0.18
TCOF1-201ENST00000323668 ARHGAP19Q14CB8 494 aa13.94□□□□□ -0.18
TCOF1-201ENST00000323668 ZNF767PQ75MW2 155 aa13.94□□□□□ -0.18
TCOF1-201ENST00000323668 BTLAQ7Z6A9 289 aa13.94□□□□□ -0.18
TCOF1-201ENST00000323668 TAF8Q7Z7C8 310 aa13.94□□□□□ -0.18
TCOF1-201ENST00000323668 PDZD3Q86UT5 571 aa13.94□□□□□ -0.18
TCOF1-201ENST00000323668 LRRC25Q8N386 305 aaPredicted RBP13.94□□□□□ -0.18
TCOF1-201ENST00000323668 S100A16Q96FQ6 103 aaKnown RBP13.94□□□□□ -0.18
TCOF1-201ENST00000323668 RNF167Q9H6Y7 350 aa13.94□□□□□ -0.18
TCOF1-201ENST00000323668 MTHFD2LQ9H903 347 aaPredicted RBP13.94□□□□□ -0.18
TCOF1-201ENST00000323668 RDH8Q9NYR8 311 aa13.94□□□□□ -0.18
TCOF1-201ENST00000323668 BAIAP2Q9UQB8 552 aa13.94□□□□□ -0.18
TCOF1-201ENST00000323668 ANTXRLA6NF34 631 aa13.94□□□□□ -0.18
TCOF1-201ENST00000323668 ZNF670-ZNF695F2Z2N8 137 aa13.94□□□□□ -0.18
TCOF1-201ENST00000323668 WWP2O00308 870 aa13.94□□□□□ -0.18
TCOF1-201ENST00000323668 TSPAN4O14817 238 aa13.94□□□□□ -0.18
TCOF1-201ENST00000323668 ABLIM3O94929 683 aa13.94□□□□□ -0.18
TCOF1-201ENST00000323668 DNASE1P24855 282 aa13.94□□□□□ -0.18
TCOF1-201ENST00000323668 LCN1P31025 176 aa13.94□□□□□ -0.18
TCOF1-201ENST00000323668 PGDP52209 483 aa13.94□□□□□ -0.18
TCOF1-201ENST00000323668 DEFB134Q4QY38 66 aa13.94□□□□□ -0.18
TCOF1-201ENST00000323668 FAHD1Q6P587 224 aa13.94□□□□□ -0.18
TCOF1-201ENST00000323668 SAMD8Q96LT4 415 aa13.94□□□□□ -0.18
TCOF1-201ENST00000323668 CSF3RQ99062 836 aa13.94□□□□□ -0.18
TCOF1-201ENST00000323668 CXorf36Q9H7Y0 433 aa13.94□□□□□ -0.18
TCOF1-201ENST00000323668 Q8N9G6 341 aaPredicted RBP13.93□□□□□ -0.18
TCOF1-201ENST00000323668 SLC41A3Q96GZ6 507 aa13.93□□□□□ -0.18
TCOF1-201ENST00000323668 ZNF717Q9BY31 904 aaPredicted RBP13.93□□□□□ -0.18
TCOF1-201ENST00000323668 HCFC1R1Q9NWW0 138 aa13.93□□□□□ -0.18
TCOF1-201ENST00000323668 DNMT3AQ9Y6K1 912 aaPredicted RBP13.93□□□□□ -0.18
TCOF1-201ENST00000323668 NRXN2Q9P2S2 1712 aa13.93□□□□□ -0.18
TCOF1-201ENST00000323668 NUMA1Q14980 2115 aa13.93□□□□□ -0.18
TCOF1-201ENST00000323668 L7N2F9 121 aa13.93□□□□□ -0.18
TCOF1-201ENST00000323668 OR12D2P58182 307 aa13.93□□□□□ -0.18
TCOF1-201ENST00000323668 SF3A2Q15428 464 aaKnown RBP13.93□□□□□ -0.18
TCOF1-201ENST00000323668 CD300LGQ6UXG3 332 aa13.93□□□□□ -0.18
TCOF1-201ENST00000323668 ZNF852Q6ZMS4 543 aa13.93□□□□□ -0.18
TCOF1-201ENST00000323668 GAREM2Q75VX8 874 aa13.93□□□□□ -0.18
TCOF1-201ENST00000323668 ADAMTS19Q8TE59 1207 aa13.93□□□□□ -0.18
TCOF1-201ENST00000323668 ADAD1Q96M93 576 aaKnown RBP13.93□□□□□ -0.18
TCOF1-201ENST00000323668 KLHL31Q9H511 634 aa13.93□□□□□ -0.18
TCOF1-201ENST00000323668 MVB12BQ9H7P6 319 aa13.93□□□□□ -0.18
TCOF1-201ENST00000323668 ACSS1Q9NUB1 689 aaPredicted RBP13.93□□□□□ -0.18
TCOF1-201ENST00000323668 ACER3Q9NUN7 267 aa13.93□□□□□ -0.18
TCOF1-201ENST00000323668 OSGIN1Q9UJX0 560 aa13.93□□□□□ -0.18
TCOF1-201ENST00000323668 GPR34Q9UPC5 381 aa13.93□□□□□ -0.18
TCOF1-201ENST00000323668 ZNF860A6NHJ4 632 aa13.93□□□□□ -0.18
TCOF1-201ENST00000323668 COQ9O75208 318 aa13.93□□□□□ -0.18
TCOF1-201ENST00000323668 ACP2P11117 423 aa13.93□□□□□ -0.18
TCOF1-201ENST00000323668 MAN2A2P49641 1150 aa13.93□□□□□ -0.18
TCOF1-201ENST00000323668 ENPP2Q13822 863 aa13.93□□□□□ -0.18
TCOF1-201ENST00000323668 GPR19Q15760 415 aa13.93□□□□□ -0.18
TCOF1-201ENST00000323668 DUSP7Q16829 419 aa13.93□□□□□ -0.18
TCOF1-201ENST00000323668 TATDN3Q17R31 274 aa13.93□□□□□ -0.18
TCOF1-201ENST00000323668 CST9Q5W186 159 aa13.93□□□□□ -0.18
TCOF1-201ENST00000323668 OR2L2Q8NH16 312 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms