RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 ZNF680Q8NEM1 530 aa6.73□□□□□ -1.33
SMC1A-201ENST00000322213 NETO1Q8TDF5 533 aa6.73□□□□□ -1.33
SMC1A-201ENST00000322213 GIMAP5Q96F15 307 aa6.73□□□□□ -1.33
SMC1A-201ENST00000322213 NSUN3Q9H649 340 aaKnown RBP6.73□□□□□ -1.33
SMC1A-201ENST00000322213 SPHK1Q9NYA1 384 aa6.73□□□□□ -1.33
SMC1A-201ENST00000322213 GALPQ9UBC7 116 aa6.73□□□□□ -1.33
SMC1A-201ENST00000322213 SLC22A31A6NKX4 558 aa6.73□□□□□ -1.33
SMC1A-201ENST00000322213 FAM170BA6NMN3 283 aa6.73□□□□□ -1.33
SMC1A-201ENST00000322213 WASH4PA8MWX3 477 aa6.73□□□□□ -1.33
SMC1A-201ENST00000322213 MMP20O60882 483 aa6.73□□□□□ -1.33
SMC1A-201ENST00000322213 CD1EP15812 388 aa6.73□□□□□ -1.33
SMC1A-201ENST00000322213 FDXRP22570 491 aa6.73□□□□□ -1.33
SMC1A-201ENST00000322213 PSMD8P48556 350 aa6.73□□□□□ -1.33
SMC1A-201ENST00000322213 MS4A15Q8N5U1 240 aa6.73□□□□□ -1.33
SMC1A-201ENST00000322213 ACBD7Q8N6N7 88 aa6.73□□□□□ -1.33
SMC1A-201ENST00000322213 ZNF527Q8NB42 609 aa6.73□□□□□ -1.33
SMC1A-201ENST00000322213 OR5T3Q8NGG3 340 aa6.73□□□□□ -1.33
SMC1A-201ENST00000322213 ELP5Q8TE02 316 aa6.73□□□□□ -1.33
SMC1A-201ENST00000322213 ACBD6Q9BR61 282 aa6.73□□□□□ -1.33
SMC1A-201ENST00000322213 H7C417 338 aa6.73□□□□□ -1.33
SMC1A-201ENST00000322213 SAP18O00422 153 aaKnown RBP6.73□□□□□ -1.33
SMC1A-201ENST00000322213 SCAMP2O15127 329 aaKnown RBP6.73□□□□□ -1.33
SMC1A-201ENST00000322213 KCNQ2O43526 872 aa6.73□□□□□ -1.33
SMC1A-201ENST00000322213 RBMXL2O75526 392 aaKnown RBP6.73□□□□□ -1.33
SMC1A-201ENST00000322213 SLC35G4P0C7Q5 338 aa6.73□□□□□ -1.33
SMC1A-201ENST00000322213 GPR26Q8NDV2 337 aa6.73□□□□□ -1.33
SMC1A-201ENST00000322213 OR52E4Q8NGH9 312 aa6.73□□□□□ -1.33
SMC1A-201ENST00000322213 HERPUD2Q9BSE4 406 aa6.73□□□□□ -1.33
SMC1A-201ENST00000322213 HYKKA2RU49 373 aa6.73□□□□□ -1.33
SMC1A-201ENST00000322213 AKAIN1P0CW23 69 aa6.73□□□□□ -1.33
SMC1A-201ENST00000322213 OSMP13725 252 aa6.73□□□□□ -1.33
SMC1A-201ENST00000322213 CD53P19397 219 aa6.73□□□□□ -1.33
SMC1A-201ENST00000322213 CLDN8P56748 225 aa6.73□□□□□ -1.33
SMC1A-201ENST00000322213 TAP2Q03519 686 aa6.73□□□□□ -1.33
SMC1A-201ENST00000322213 OR4D1Q15615 310 aa6.73□□□□□ -1.33
SMC1A-201ENST00000322213 CHRDL2Q6WN34 429 aa6.73□□□□□ -1.33
SMC1A-201ENST00000322213 ZER1Q7Z7L7 766 aa6.73□□□□□ -1.33
SMC1A-201ENST00000322213 TPRA1Q86W33 373 aa6.73□□□□□ -1.33
SMC1A-201ENST00000322213 YAF2Q8IY57 180 aa6.73□□□□□ -1.33
SMC1A-201ENST00000322213 PGBD3Q8N328 593 aa6.73□□□□□ -1.33
SMC1A-201ENST00000322213 OR51G2Q8NGK0 314 aa6.73□□□□□ -1.33
SMC1A-201ENST00000322213 SUN3Q8TAQ9 357 aa6.73□□□□□ -1.33
SMC1A-201ENST00000322213 TM6SF2Q9BZW4 377 aa6.73□□□□□ -1.33
SMC1A-201ENST00000322213 ELP3Q9H9T3 547 aa6.73□□□□□ -1.33
SMC1A-201ENST00000322213 FBRSL1Q9HCM7 1045 aaKnown RBP6.73□□□□□ -1.33
SMC1A-201ENST00000322213 ASH2LQ9UBL3 628 aa6.73□□□□□ -1.33
SMC1A-201ENST00000322213 CORINQ9Y5Q5 1042 aa6.73□□□□□ -1.33
SMC1A-201ENST00000322213 ZNF98A6NK75 572 aa6.73□□□□□ -1.33
SMC1A-201ENST00000322213 UCHL1P09936 223 aa6.73□□□□□ -1.33
SMC1A-201ENST00000322213 CNR2P34972 360 aa6.73□□□□□ -1.33
SMC1A-201ENST00000322213 HSD17B2P37059 387 aa6.73□□□□□ -1.33
SMC1A-201ENST00000322213 CRISP1P54107 249 aa6.73□□□□□ -1.33
SMC1A-201ENST00000322213 HBMQ6B0K9 141 aa6.73□□□□□ -1.33
SMC1A-201ENST00000322213 CHADLQ6NUI6 762 aa6.73□□□□□ -1.33
SMC1A-201ENST00000322213 SPATC1Q76KD6 591 aa6.73□□□□□ -1.33
SMC1A-201ENST00000322213 OR5W2Q8NH69 310 aa6.73□□□□□ -1.33
SMC1A-201ENST00000322213 SCARB1Q8WTV0 552 aa6.73□□□□□ -1.33
SMC1A-201ENST00000322213 DUS3LQ96G46 650 aaKnown RBP6.73□□□□□ -1.33
SMC1A-201ENST00000322213 ATG10Q9H0Y0 220 aa6.73□□□□□ -1.33
SMC1A-201ENST00000322213 TMPRSS11EQ9UL52 423 aa6.73□□□□□ -1.33
SMC1A-201ENST00000322213 ACPPP15309 386 aa6.72□□□□□ -1.33
SMC1A-201ENST00000322213 PIGAP37287 484 aa6.72□□□□□ -1.33
SMC1A-201ENST00000322213 GRK6P43250 576 aa6.72□□□□□ -1.33
SMC1A-201ENST00000322213 STXBP1P61764 594 aaKnown RBP6.72□□□□□ -1.33
SMC1A-201ENST00000322213 CEP68Q76N32 757 aa6.72□□□□□ -1.33
SMC1A-201ENST00000322213 SLC16A9Q7RTY1 509 aa6.72□□□□□ -1.33
SMC1A-201ENST00000322213 NUDT13Q86X67 352 aa6.72□□□□□ -1.33
SMC1A-201ENST00000322213 JAGN1Q8N5M9 183 aa6.72□□□□□ -1.33
SMC1A-201ENST00000322213 SLC35F5Q8WV83 523 aa6.72□□□□□ -1.33
SMC1A-201ENST00000322213 SAP130Q9H0E3 1048 aa6.72□□□□□ -1.33
SMC1A-201ENST00000322213 INPP5EQ9NRR6 644 aa6.72□□□□□ -1.33
SMC1A-201ENST00000322213 ZNF20P17024 532 aa6.72□□□□□ -1.33
SMC1A-201ENST00000322213 CAMLGP49069 296 aa6.72□□□□□ -1.33
SMC1A-201ENST00000322213 HTRA4P83105 476 aaPredicted RBP6.72□□□□□ -1.33
SMC1A-201ENST00000322213 GINS1Q14691 196 aa6.72□□□□□ -1.33
SMC1A-201ENST00000322213 SOWAHAQ2M3V2 549 aa6.72□□□□□ -1.33
SMC1A-201ENST00000322213 BRAT1Q6PJG6 821 aa6.72□□□□□ -1.33
SMC1A-201ENST00000322213 TRIM46Q7Z4K8 759 aa6.72□□□□□ -1.33
SMC1A-201ENST00000322213 MOCOSQ96EN8 888 aa6.72□□□□□ -1.33
SMC1A-201ENST00000322213 ZNF778Q96MU6 729 aa6.72□□□□□ -1.33
SMC1A-201ENST00000322213 SLC6A7Q99884 636 aa6.72□□□□□ -1.33
SMC1A-201ENST00000322213 PDGFDQ9GZP0 370 aaPredicted RBP6.72□□□□□ -1.33
SMC1A-201ENST00000322213 FAM230AA0A1W2PPH8 454 aa6.72□□□□□ -1.33
SMC1A-201ENST00000322213 CARNS1A5YM72 827 aa6.72□□□□□ -1.33
SMC1A-201ENST00000322213 OR2AG2A6NM03 316 aa6.72□□□□□ -1.33
SMC1A-201ENST00000322213 AGAP14A8MT82 685 aa6.72□□□□□ -1.33
SMC1A-201ENST00000322213 ARHGAP33O14559 1287 aa6.72□□□□□ -1.33
SMC1A-201ENST00000322213 IMPA2O14732 288 aa6.72□□□□□ -1.33
SMC1A-201ENST00000322213 TAS2R50P59544 299 aa6.72□□□□□ -1.33
SMC1A-201ENST00000322213 MAPK14Q16539 360 aa6.72□□□□□ -1.33
SMC1A-201ENST00000322213 PTCHD3Q3KNS1 767 aa6.72□□□□□ -1.33
SMC1A-201ENST00000322213 RNF212Q495C1 297 aa6.72□□□□□ -1.33
SMC1A-201ENST00000322213 GPR33Q49SQ1 333 aa6.72□□□□□ -1.33
SMC1A-201ENST00000322213 CCNJQ5T5M9 372 aa6.72□□□□□ -1.33
SMC1A-201ENST00000322213 CLEC20AQ6ZU45 233 aa6.72□□□□□ -1.33
SMC1A-201ENST00000322213 SUMF2Q8NBJ7 301 aa6.72□□□□□ -1.33
SMC1A-201ENST00000322213 RAET1EQ8TD07 263 aa6.72□□□□□ -1.33
SMC1A-201ENST00000322213 MZB1Q8WU39 189 aa6.72□□□□□ -1.33
SMC1A-201ENST00000322213 TTPALQ9BTX7 342 aa6.72□□□□□ -1.33
SMC1A-201ENST00000322213 GSTO2Q9H4Y5 243 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms