RNA–Protein interactions for RNA: ENST00000317610.11

RTN4-201, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,333 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-201ENST00000317610 NT5DC2Q9H857 520 aa17.98■□□□□ 0.47
RTN4-201ENST00000317610 HMX1Q9NP08 348 aaPredicted RBP17.98■□□□□ 0.47
RTN4-201ENST00000317610 NLKQ9UBE8 527 aa17.98■□□□□ 0.47
RTN4-201ENST00000317610 PHF11Q9UIL8 331 aa17.98■□□□□ 0.47
RTN4-201ENST00000317610 GPR34Q9UPC5 381 aa17.98■□□□□ 0.47
RTN4-201ENST00000317610 ASF1AQ9Y294 204 aa17.98■□□□□ 0.47
RTN4-201ENST00000317610 GPR52Q9Y2T5 361 aa17.98■□□□□ 0.47
RTN4-201ENST00000317610 ASB4Q9Y574 426 aa17.98■□□□□ 0.47
RTN4-201ENST00000317610 CLCA3PQ9Y6N3 262 aa17.98■□□□□ 0.47
RTN4-201ENST00000317610 CKAP5Q14008 2032 aa17.98■□□□□ 0.47
RTN4-201ENST00000317610 SHISA3A0PJX4 238 aa17.97■□□□□ 0.47
RTN4-201ENST00000317610 HLA-DPB1P04440 258 aa17.97■□□□□ 0.47
RTN4-201ENST00000317610 CHRM4P08173 479 aa17.97■□□□□ 0.47
RTN4-201ENST00000317610 KHKP50053 298 aa17.97■□□□□ 0.47
RTN4-201ENST00000317610 TLE2Q04725 743 aa17.97■□□□□ 0.47
RTN4-201ENST00000317610 FUT5Q11128 374 aa17.97■□□□□ 0.47
RTN4-201ENST00000317610 TSPAN31Q12999 210 aa17.97■□□□□ 0.47
RTN4-201ENST00000317610 IL18Q14116 193 aa17.97■□□□□ 0.47
RTN4-201ENST00000317610 LY6G5CQ5SRR4 150 aa17.97■□□□□ 0.47
RTN4-201ENST00000317610 MZT2AQ6P582 158 aa17.97■□□□□ 0.47
RTN4-201ENST00000317610 RASSF6Q6ZTQ3 369 aa17.97■□□□□ 0.47
RTN4-201ENST00000317610 SHFQ7M4L6 423 aa17.97■□□□□ 0.47
RTN4-201ENST00000317610 UBE3DQ7Z6J8 389 aa17.97■□□□□ 0.47
RTN4-201ENST00000317610 DCUN1D3Q8IWE4 304 aa17.97■□□□□ 0.47
RTN4-201ENST00000317610 AMDHD1Q96NU7 426 aa17.97■□□□□ 0.47
RTN4-201ENST00000317610 CUEDC1Q9NWM3 386 aaPredicted RBP17.97■□□□□ 0.47
RTN4-201ENST00000317610 TRPC4Q9UBN4 977 aa17.97■□□□□ 0.47
RTN4-201ENST00000317610 MALT1Q9UDY8 824 aa17.97■□□□□ 0.47
RTN4-201ENST00000317610 TAC3Q9UHF0 121 aa17.97■□□□□ 0.47
RTN4-201ENST00000317610 CLCA2Q9UQC9 943 aa17.97■□□□□ 0.47
RTN4-201ENST00000317610 ORC5O43913 435 aa17.97■□□□□ 0.47
RTN4-201ENST00000317610 C8AP07357 584 aa17.97■□□□□ 0.47
RTN4-201ENST00000317610 LAG3P18627 525 aa17.97■□□□□ 0.47
RTN4-201ENST00000317610 TRA2BP62995 288 aaKnown RBP17.97■□□□□ 0.47
RTN4-201ENST00000317610 LYPD8Q6UX82 237 aa17.97■□□□□ 0.47
RTN4-201ENST00000317610 OLIG3Q7RTU3 272 aa17.97■□□□□ 0.47
RTN4-201ENST00000317610 C11orf96Q7Z7L8 435 aa17.97■□□□□ 0.47
RTN4-201ENST00000317610 MARCH9Q86YJ5 346 aa17.97■□□□□ 0.47
RTN4-201ENST00000317610 SUN3Q8TAQ9 357 aa17.97■□□□□ 0.47
RTN4-201ENST00000317610 RAET1EQ8TD07 263 aa17.97■□□□□ 0.47
RTN4-201ENST00000317610 UCN3Q969E3 161 aa17.97■□□□□ 0.47
RTN4-201ENST00000317610 RGMAQ96B86 450 aa17.97■□□□□ 0.47
RTN4-201ENST00000317610 NUS1Q96E22 293 aa17.97■□□□□ 0.47
RTN4-201ENST00000317610 PINK1Q9BXM7 581 aa17.97■□□□□ 0.47
RTN4-201ENST00000317610 RNF32Q9H0A6 362 aa17.97■□□□□ 0.47
RTN4-201ENST00000317610 TRIM45Q9H8W5 580 aaPredicted RBP17.97■□□□□ 0.47
RTN4-201ENST00000317610 ASB6Q9NWX5 421 aa17.97■□□□□ 0.47
RTN4-201ENST00000317610 GABRPO00591 440 aa17.96■□□□□ 0.47
RTN4-201ENST00000317610 NDUFS4O43181 175 aa17.96■□□□□ 0.47
RTN4-201ENST00000317610 ARSBP15848 533 aa17.96■□□□□ 0.47
RTN4-201ENST00000317610 IFNGR2P38484 337 aa17.96■□□□□ 0.47
RTN4-201ENST00000317610 GPR1P46091 355 aa17.96■□□□□ 0.47
RTN4-201ENST00000317610 ARHGAP19Q14CB8 494 aa17.96■□□□□ 0.47
RTN4-201ENST00000317610 AADACL4Q5VUY2 407 aa17.96■□□□□ 0.47
RTN4-201ENST00000317610 RAET1GQ6H3X3 334 aa17.96■□□□□ 0.47
RTN4-201ENST00000317610 LAMTOR1Q6IAA8 161 aa17.96■□□□□ 0.47
RTN4-201ENST00000317610 LILRA6Q6PI73 481 aa17.96■□□□□ 0.47
RTN4-201ENST00000317610 CREB3L2Q70SY1 520 aa17.96■□□□□ 0.47
RTN4-201ENST00000317610 ZNF767PQ75MW2 155 aa17.96■□□□□ 0.47
RTN4-201ENST00000317610 DNAJA4Q8WW22 397 aaPredicted RBP17.96■□□□□ 0.47
RTN4-201ENST00000317610 NR4A3Q92570 626 aa17.96■□□□□ 0.47
RTN4-201ENST00000317610 PITHD1Q9GZP4 211 aaPredicted RBP17.96■□□□□ 0.47
RTN4-201ENST00000317610 DDX31Q9H8H2 851 aaKnown RBP17.96■□□□□ 0.47
RTN4-201ENST00000317610 ZCCHC3Q9NUD5 404 aaKnown RBP17.96■□□□□ 0.47
RTN4-201ENST00000317610 ADAM30Q9UKF2 790 aa17.96■□□□□ 0.47
RTN4-201ENST00000317610 LIPT1Q9Y234 373 aa17.96■□□□□ 0.47
RTN4-201ENST00000317610 EXOGQ9Y2C4 368 aaKnown RBP17.96■□□□□ 0.47
RTN4-201ENST00000317610 CDH10Q9Y6N8 788 aa17.96■□□□□ 0.47
RTN4-201ENST00000317610 AKAP8O43823 692 aaKnown RBP17.95■□□□□ 0.46
RTN4-201ENST00000317610 PQBP1O60828 265 aaKnown RBP17.95■□□□□ 0.46
RTN4-201ENST00000317610 GALP22466 123 aa17.95■□□□□ 0.46
RTN4-201ENST00000317610 HOXD10P28358 340 aa17.95■□□□□ 0.46
RTN4-201ENST00000317610 CCR8P51685 355 aa17.95■□□□□ 0.46
RTN4-201ENST00000317610 TMEM44Q2T9K0 475 aa17.95■□□□□ 0.46
RTN4-201ENST00000317610 TMEM64Q6YI46 380 aa17.95■□□□□ 0.46
RTN4-201ENST00000317610 LHFPL3Q86UP9 236 aa17.95■□□□□ 0.46
RTN4-201ENST00000317610 NEIL3Q8TAT5 605 aa17.95■□□□□ 0.46
RTN4-201ENST00000317610 SNAPC3Q92966 411 aa17.95■□□□□ 0.46
RTN4-201ENST00000317610 MED30Q96HR3 178 aa17.95■□□□□ 0.46
RTN4-201ENST00000317610 CAMK1GQ96NX5 476 aa17.95■□□□□ 0.46
RTN4-201ENST00000317610 UBL7Q96S82 380 aaPredicted RBP17.95■□□□□ 0.46
RTN4-201ENST00000317610 A0A0G2JPF8 293 aa17.95■□□□□ 0.46
RTN4-201ENST00000317610 FAM170BA6NMN3 283 aa17.95■□□□□ 0.46
RTN4-201ENST00000317610 HNRNPCL2B2RXH8 293 aa17.95■□□□□ 0.46
RTN4-201ENST00000317610 HNRNPCL3B7ZW38 293 aa17.95■□□□□ 0.46
RTN4-201ENST00000317610 CHST10O43529 356 aa17.95■□□□□ 0.46
RTN4-201ENST00000317610 SLC19A2O60779 497 aa17.95■□□□□ 0.46
RTN4-201ENST00000317610 NCR1O76036 304 aa17.95■□□□□ 0.46
RTN4-201ENST00000317610 IGHA1P01876 353 aa17.95■□□□□ 0.46
RTN4-201ENST00000317610 FGBP02675 491 aa17.95■□□□□ 0.46
RTN4-201ENST00000317610 HNRNPCL4P0DMR1 293 aa17.95■□□□□ 0.46
RTN4-201ENST00000317610 AVPR1BP47901 424 aa17.95■□□□□ 0.46
RTN4-201ENST00000317610 CDH11P55287 796 aa17.95■□□□□ 0.46
RTN4-201ENST00000317610 MAB21L1Q13394 359 aa17.95■□□□□ 0.46
RTN4-201ENST00000317610 BTBD16Q32M84 506 aa17.95■□□□□ 0.46
RTN4-201ENST00000317610 VASNQ6EMK4 673 aa17.95■□□□□ 0.46
RTN4-201ENST00000317610 MEX3DQ86XN8 651 aaKnown RBP17.95■□□□□ 0.46
RTN4-201ENST00000317610 TP53I13Q8NBR0 393 aaPredicted RBP17.95■□□□□ 0.46
RTN4-201ENST00000317610 OR4M1Q8NGD0 313 aa17.95■□□□□ 0.46
RTN4-201ENST00000317610 OR52N1Q8NH53 320 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms