RNA–Protein interactions for RNA: ENST00000315544.6

CNOT4-201, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 3,783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-201ENST00000315544 OR1E2P47887 323 aa7.31□□□□□ -1.24
CNOT4-201ENST00000315544 PREPP48147 710 aa7.31□□□□□ -1.24
CNOT4-201ENST00000315544 GPR143P51810 404 aa7.31□□□□□ -1.24
CNOT4-201ENST00000315544 EPHA4P54764 986 aa7.31□□□□□ -1.24
CNOT4-201ENST00000315544 INSL4Q14641 139 aa7.31□□□□□ -1.24
CNOT4-201ENST00000315544 SIRT6Q8N6T7 355 aa7.31□□□□□ -1.24
CNOT4-201ENST00000315544 OR10G2Q8NGC3 310 aa7.31□□□□□ -1.24
CNOT4-201ENST00000315544 OR6T1Q8NGN1 323 aa7.31□□□□□ -1.24
CNOT4-201ENST00000315544 NFKBIDQ8NI38 313 aa7.31□□□□□ -1.24
CNOT4-201ENST00000315544 GEMIN6Q8WXD5 167 aaKnown RBP7.31□□□□□ -1.24
CNOT4-201ENST00000315544 APOLD1Q96LR9 279 aa7.31□□□□□ -1.24
CNOT4-201ENST00000315544 COPS8Q99627 209 aa7.31□□□□□ -1.24
CNOT4-201ENST00000315544 COPS4Q9BT78 406 aa7.31□□□□□ -1.24
CNOT4-201ENST00000315544 MARCH7Q9H992 704 aa7.31□□□□□ -1.24
CNOT4-201ENST00000315544 EVA1BQ9NVM1 165 aa7.31□□□□□ -1.24
CNOT4-201ENST00000315544 MPDZO75970 2070 aa7.31□□□□□ -1.24
CNOT4-201ENST00000315544 BDP1A6H8Y1 2624 aa7.31□□□□□ -1.24
CNOT4-201ENST00000315544 PLPP2O43688 288 aa7.31□□□□□ -1.24
CNOT4-201ENST00000315544 GSTZ1O43708 216 aaPredicted RBP7.31□□□□□ -1.24
CNOT4-201ENST00000315544 HS6ST1O60243 411 aa7.31□□□□□ -1.24
CNOT4-201ENST00000315544 CNOT3O75175 753 aaKnown RBP7.31□□□□□ -1.24
CNOT4-201ENST00000315544 FADS2O95864 444 aaKnown RBP7.31□□□□□ -1.24
CNOT4-201ENST00000315544 SOX3P41225 446 aa7.31□□□□□ -1.24
CNOT4-201ENST00000315544 TSFMP43897 325 aaKnown RBP7.31□□□□□ -1.24
CNOT4-201ENST00000315544 ASMTP46597 345 aa7.31□□□□□ -1.24
CNOT4-201ENST00000315544 BCL2L1Q07817 233 aa7.31□□□□□ -1.24
CNOT4-201ENST00000315544 MINDY4Q4G0A6 757 aa7.31□□□□□ -1.24
CNOT4-201ENST00000315544 TPRG1LQ5T0D9 272 aa7.31□□□□□ -1.24
CNOT4-201ENST00000315544 DMKNQ6E0U4 476 aaPredicted RBP7.31□□□□□ -1.24
CNOT4-201ENST00000315544 TYW3Q6IPR3 259 aaKnown RBP7.31□□□□□ -1.24
CNOT4-201ENST00000315544 Q6ZVU0 165 aa7.31□□□□□ -1.24
CNOT4-201ENST00000315544 KLBQ86Z14 1044 aa7.31□□□□□ -1.24
CNOT4-201ENST00000315544 GABPB2Q8TAK5 448 aaPredicted RBP7.31□□□□□ -1.24
CNOT4-201ENST00000315544 C9orf43Q8TAL5 461 aaPredicted RBP7.31□□□□□ -1.24
CNOT4-201ENST00000315544 SSC4DQ8WTU2 575 aa7.31□□□□□ -1.24
CNOT4-201ENST00000315544 MGLLQ99685 303 aa7.31□□□□□ -1.24
CNOT4-201ENST00000315544 C2orf49Q9BVC5 232 aaPredicted RBP7.31□□□□□ -1.24
CNOT4-201ENST00000315544 BARX1Q9HBU1 254 aaPredicted RBP7.31□□□□□ -1.24
CNOT4-201ENST00000315544 HMG20AQ9NP66 347 aa7.31□□□□□ -1.24
CNOT4-201ENST00000315544 MEPEQ9NQ76 525 aaPredicted RBP7.31□□□□□ -1.24
CNOT4-201ENST00000315544 PLSCR3Q9NRY6 295 aa7.31□□□□□ -1.24
CNOT4-201ENST00000315544 PIPOXQ9P0Z9 390 aa7.31□□□□□ -1.24
CNOT4-201ENST00000315544 EIF3KQ9UBQ5 218 aaKnown RBP7.31□□□□□ -1.24
CNOT4-201ENST00000315544 DNMT3AQ9Y6K1 912 aaPredicted RBP7.31□□□□□ -1.24
CNOT4-201ENST00000315544 CCDC160A6NGH7 325 aa7.3□□□□□ -1.24
CNOT4-201ENST00000315544 CTDSPLO15194 276 aa7.3□□□□□ -1.24
CNOT4-201ENST00000315544 MTX2O75431 263 aa7.3□□□□□ -1.24
CNOT4-201ENST00000315544 EPN2O95208 641 aa7.3□□□□□ -1.24
CNOT4-201ENST00000315544 EIF2S1P05198 315 aaKnown RBP7.3□□□□□ -1.24
CNOT4-201ENST00000315544 S100A3P33764 101 aa7.3□□□□□ -1.24
CNOT4-201ENST00000315544 ACAA2P42765 397 aaKnown RBP7.3□□□□□ -1.24
CNOT4-201ENST00000315544 RHOAP61586 193 aa7.3□□□□□ -1.24
CNOT4-201ENST00000315544 P2RY14Q15391 338 aa7.3□□□□□ -1.24
CNOT4-201ENST00000315544 ARMC4Q5T2S8 1044 aa7.3□□□□□ -1.24
CNOT4-201ENST00000315544 KHDRBS2Q5VWX1 349 aaKnown RBP7.3□□□□□ -1.24
CNOT4-201ENST00000315544 PODNL1Q6PEZ8 512 aa7.3□□□□□ -1.24
CNOT4-201ENST00000315544 RFLNBQ8N5W9 214 aa7.3□□□□□ -1.24
CNOT4-201ENST00000315544 PPP1R16AQ96I34 528 aa7.3□□□□□ -1.24
CNOT4-201ENST00000315544 TMEM43Q9BTV4 400 aa7.3□□□□□ -1.24
CNOT4-201ENST00000315544 TBC1D23Q9NUY8 699 aa7.3□□□□□ -1.24
CNOT4-201ENST00000315544 CUEDC1Q9NWM3 386 aaPredicted RBP7.3□□□□□ -1.24
CNOT4-201ENST00000315544 SERGEFQ9UGK8 458 aa7.3□□□□□ -1.24
CNOT4-201ENST00000315544 NDRG2Q9UN36 371 aaKnown RBP7.3□□□□□ -1.24
CNOT4-201ENST00000315544 CORO2BQ9UQ03 480 aa7.3□□□□□ -1.24
CNOT4-201ENST00000315544 GRIP1Q9Y3R0 1128 aa7.3□□□□□ -1.24
CNOT4-201ENST00000315544 A0A1W2PQF6 199 aa7.3□□□□□ -1.24
CNOT4-201ENST00000315544 H3BM21 787 aa7.3□□□□□ -1.24
CNOT4-201ENST00000315544 CYR61O00622 381 aa7.3□□□□□ -1.24
CNOT4-201ENST00000315544 ADAMDEC1O15204 470 aa7.3□□□□□ -1.24
CNOT4-201ENST00000315544 AKAP8O43823 692 aaKnown RBP7.3□□□□□ -1.24
CNOT4-201ENST00000315544 CLEC2LP0C7M8 214 aa7.3□□□□□ -1.24
CNOT4-201ENST00000315544 ACP2P11117 423 aa7.3□□□□□ -1.24
CNOT4-201ENST00000315544 F3P13726 295 aa7.3□□□□□ -1.24
CNOT4-201ENST00000315544 ITGA2P17301 1181 aa7.3□□□□□ -1.24
CNOT4-201ENST00000315544 GJA1P17302 382 aa7.3□□□□□ -1.24
CNOT4-201ENST00000315544 MAPK9P45984 424 aa7.3□□□□□ -1.24
CNOT4-201ENST00000315544 MAPK10P53779 464 aa7.3□□□□□ -1.24
CNOT4-201ENST00000315544 ELP6Q0PNE2 266 aa7.3□□□□□ -1.24
CNOT4-201ENST00000315544 ITGADQ13349 1161 aa7.3□□□□□ -1.24
CNOT4-201ENST00000315544 SCARB2Q14108 478 aa7.3□□□□□ -1.24
CNOT4-201ENST00000315544 CACHD1Q5VU97 1274 aa7.3□□□□□ -1.24
CNOT4-201ENST00000315544 SMARCD3Q6STE5 483 aa7.3□□□□□ -1.24
CNOT4-201ENST00000315544 PRR23CQ6ZRP0 262 aa7.3□□□□□ -1.24
CNOT4-201ENST00000315544 GRAMD2AQ8IUY3 354 aa7.3□□□□□ -1.24
CNOT4-201ENST00000315544 EXT2Q93063 718 aa7.3□□□□□ -1.24
CNOT4-201ENST00000315544 NECAB3Q96P71 396 aaPredicted RBP7.3□□□□□ -1.24
CNOT4-201ENST00000315544 RIOK2Q9BVS4 552 aaKnown RBP7.3□□□□□ -1.24
CNOT4-201ENST00000315544 TM6SF2Q9BZW4 377 aa7.3□□□□□ -1.24
CNOT4-201ENST00000315544 C11orf54Q9H0W9 315 aaPredicted RBP7.3□□□□□ -1.24
CNOT4-201ENST00000315544 TP63Q9H3D4 680 aaPredicted RBP7.3□□□□□ -1.24
CNOT4-201ENST00000315544 MTG2Q9H4K7 406 aa7.3□□□□□ -1.24
CNOT4-201ENST00000315544 CERS4Q9HA82 394 aa7.3□□□□□ -1.24
CNOT4-201ENST00000315544 CYSLTR2Q9NS75 346 aa7.3□□□□□ -1.24
CNOT4-201ENST00000315544 TM7SF3Q9NS93 570 aa7.3□□□□□ -1.24
CNOT4-201ENST00000315544 SEMA4GQ9NTN9 838 aa7.3□□□□□ -1.24
CNOT4-201ENST00000315544 STUB1Q9UNE7 303 aa7.3□□□□□ -1.24
CNOT4-201ENST00000315544 A0A087WV48 116 aa7.3□□□□□ -1.24
CNOT4-201ENST00000315544 HMX3A6NHT5 357 aa7.3□□□□□ -1.24
CNOT4-201ENST00000315544 SAGE2PA6NJ88 616 aa7.3□□□□□ -1.24
CNOT4-201ENST00000315544 CCRL2O00421 344 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms