RNA–Protein interactions for RNA: ENST00000312413.10

CLCN6-201, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 2 BASIC

Gene CLCN6, Length 5,631 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-201ENST00000312413 NPIPA2E9PIF3 369 aa13.03□□□□□ -0.32
CLCN6-201ENST00000312413 NPIPA3F8WFD2 350 aa13.03□□□□□ -0.32
CLCN6-201ENST00000312413 TYRP1P17643 537 aa13.03□□□□□ -0.32
CLCN6-201ENST00000312413 GDI1P31150 447 aa13.03□□□□□ -0.32
CLCN6-201ENST00000312413 NKX3-2P78367 333 aa13.03□□□□□ -0.32
CLCN6-201ENST00000312413 BORAQ6PGQ7 559 aa13.03□□□□□ -0.32
CLCN6-201ENST00000312413 DTWD1Q8N5C7 304 aa13.03□□□□□ -0.32
CLCN6-201ENST00000312413 OR4K13Q8NH42 304 aa13.03□□□□□ -0.32
CLCN6-201ENST00000312413 HUS1BQ8NHY5 278 aa13.03□□□□□ -0.32
CLCN6-201ENST00000312413 TFAP2CQ92754 450 aa13.03□□□□□ -0.32
CLCN6-201ENST00000312413 SDR39U1Q9NRG7 319 aaPredicted RBP13.03□□□□□ -0.32
CLCN6-201ENST00000312413 C19orf12Q9NSK7 152 aa13.03□□□□□ -0.32
CLCN6-201ENST00000312413 ANKMY1Q9P2S6 941 aa13.03□□□□□ -0.32
CLCN6-201ENST00000312413 RBPJLQ9UBG7 517 aa13.03□□□□□ -0.32
CLCN6-201ENST00000312413 PCTPQ9UKL6 214 aa13.03□□□□□ -0.32
CLCN6-201ENST00000312413 A8MU76 341 aa13.02□□□□□ -0.32
CLCN6-201ENST00000312413 CDK1P06493 297 aa13.02□□□□□ -0.32
CLCN6-201ENST00000312413 CHRNB1P11230 501 aa13.02□□□□□ -0.32
CLCN6-201ENST00000312413 GMPRP36959 345 aa13.02□□□□□ -0.32
CLCN6-201ENST00000312413 RNF144AP50876 292 aaPredicted RBP13.02□□□□□ -0.32
CLCN6-201ENST00000312413 AKR1C2P52895 323 aa13.02□□□□□ -0.32
CLCN6-201ENST00000312413 AGAP6Q5VW22 663 aa13.02□□□□□ -0.32
CLCN6-201ENST00000312413 FAM83FQ8NEG4 500 aaPredicted RBP13.02□□□□□ -0.32
CLCN6-201ENST00000312413 OR5AK2Q8NH90 309 aa13.02□□□□□ -0.32
CLCN6-201ENST00000312413 SETD7Q8WTS6 366 aaKnown RBP13.02□□□□□ -0.32
CLCN6-201ENST00000312413 NT5C3BQ969T7 300 aa13.02□□□□□ -0.32
CLCN6-201ENST00000312413 ECHDC3Q96DC8 303 aa13.02□□□□□ -0.32
CLCN6-201ENST00000312413 MMABQ96EY8 250 aaPredicted RBP13.02□□□□□ -0.32
CLCN6-201ENST00000312413 RRNAD1Q96FB5 475 aaKnown RBP13.02□□□□□ -0.32
CLCN6-201ENST00000312413 AGAP4Q96P64 663 aa13.02□□□□□ -0.32
CLCN6-201ENST00000312413 TCEAL7Q9BRU2 100 aa13.02□□□□□ -0.32
CLCN6-201ENST00000312413 SYNPO2LQ9H987 977 aa13.02□□□□□ -0.32
CLCN6-201ENST00000312413 NMNAT1Q9HAN9 279 aaPredicted RBP13.02□□□□□ -0.32
CLCN6-201ENST00000312413 TUBG2Q9NRH3 451 aa13.02□□□□□ -0.32
CLCN6-201ENST00000312413 B3GNT3Q9Y2A9 372 aa13.02□□□□□ -0.32
CLCN6-201ENST00000312413 MEGF11A6BM72 1044 aa13.02□□□□□ -0.32
CLCN6-201ENST00000312413 PIRO00625 290 aa13.02□□□□□ -0.32
CLCN6-201ENST00000312413 UGT2B7P16662 529 aa13.02□□□□□ -0.32
CLCN6-201ENST00000312413 ETV3P41162 512 aa13.02□□□□□ -0.32
CLCN6-201ENST00000312413 POU3F4P49335 361 aa13.02□□□□□ -0.32
CLCN6-201ENST00000312413 TMEM164Q5U3C3 297 aa13.02□□□□□ -0.32
CLCN6-201ENST00000312413 PLAG1Q6DJT9 500 aa13.02□□□□□ -0.32
CLCN6-201ENST00000312413 DPY19L2P1Q6NXN4 242 aa13.02□□□□□ -0.32
CLCN6-201ENST00000312413 IQCF1Q8N6M8 205 aa13.02□□□□□ -0.32
CLCN6-201ENST00000312413 MAPK15Q8TD08 544 aa13.02□□□□□ -0.32
CLCN6-201ENST00000312413 GIMAP5Q96F15 307 aa13.02□□□□□ -0.32
CLCN6-201ENST00000312413 LIN37Q96GY3 246 aaPredicted RBP13.02□□□□□ -0.32
CLCN6-201ENST00000312413 ZNF597Q96LX8 424 aa13.02□□□□□ -0.32
CLCN6-201ENST00000312413 KCNJ16Q9NPI9 418 aa13.02□□□□□ -0.32
CLCN6-201ENST00000312413 ZNF705FA8MVS1 300 aaPredicted RBP13.02□□□□□ -0.33
CLCN6-201ENST00000312413 ZNF705DP0CH99 300 aaPredicted RBP13.02□□□□□ -0.33
CLCN6-201ENST00000312413 ZNF705BP0CI00 300 aaPredicted RBP13.02□□□□□ -0.33
CLCN6-201ENST00000312413 BDKRB2P30411 391 aa13.02□□□□□ -0.33
CLCN6-201ENST00000312413 SLC18B1Q6NT16 456 aa13.02□□□□□ -0.33
CLCN6-201ENST00000312413 KIAA1211LQ6NV74 962 aa13.02□□□□□ -0.33
CLCN6-201ENST00000312413 ISCA2Q86U28 154 aa13.02□□□□□ -0.33
CLCN6-201ENST00000312413 NRMQ8IXM6 262 aa13.02□□□□□ -0.33
CLCN6-201ENST00000312413 PTCHD1Q96NR3 888 aa13.02□□□□□ -0.33
CLCN6-201ENST00000312413 ZNF559Q9BR84 538 aa13.02□□□□□ -0.33
CLCN6-201ENST00000312413 TXLNGYQ9BZA5 131 aa13.02□□□□□ -0.33
CLCN6-201ENST00000312413 RETREG1Q9H6L5 497 aa13.02□□□□□ -0.33
CLCN6-201ENST00000312413 VRTNQ9H8Y1 702 aa13.02□□□□□ -0.33
CLCN6-201ENST00000312413 HRASLS2Q9NWW9 162 aa13.02□□□□□ -0.33
CLCN6-201ENST00000312413 LOC105369274A0A096LPK9 316 aa13.02□□□□□ -0.33
CLCN6-201ENST00000312413 G3V2L1 256 aa13.02□□□□□ -0.33
CLCN6-201ENST00000312413 FAM189BP81408 668 aa13.02□□□□□ -0.33
CLCN6-201ENST00000312413 POU4F3Q15319 338 aa13.02□□□□□ -0.33
CLCN6-201ENST00000312413 SIX1Q15475 284 aaPredicted RBP13.02□□□□□ -0.33
CLCN6-201ENST00000312413 FAM69AQ5T7M9 428 aa13.02□□□□□ -0.33
CLCN6-201ENST00000312413 SPRYD7Q5W111 196 aa13.02□□□□□ -0.33
CLCN6-201ENST00000312413 GPR149Q86SP6 731 aa13.02□□□□□ -0.33
CLCN6-201ENST00000312413 ZNF440Q8IYI8 595 aa13.02□□□□□ -0.33
CLCN6-201ENST00000312413 ALDH16A1Q8IZ83 802 aa13.02□□□□□ -0.33
CLCN6-201ENST00000312413 OR4N4Q8N0Y3 316 aa13.02□□□□□ -0.33
CLCN6-201ENST00000312413 OR7G1Q8NGA0 311 aa13.02□□□□□ -0.33
CLCN6-201ENST00000312413 MAL2Q969L2 176 aa13.02□□□□□ -0.33
CLCN6-201ENST00000312413 SAMD11Q96NU1 681 aa13.02□□□□□ -0.33
CLCN6-201ENST00000312413 GON7Q9BXV9 100 aa13.02□□□□□ -0.33
CLCN6-201ENST00000312413 OR51E2Q9H255 320 aa13.02□□□□□ -0.33
CLCN6-201ENST00000312413 IRS2Q9Y4H2 1338 aa13.02□□□□□ -0.33
CLCN6-201ENST00000312413 NUPL2O15504 423 aaKnown RBP13.02□□□□□ -0.33
CLCN6-201ENST00000312413 SLC16A8O95907 504 aa13.02□□□□□ -0.33
CLCN6-201ENST00000312413 DEFB134Q4QY38 66 aa13.02□□□□□ -0.33
CLCN6-201ENST00000312413 C14orf28Q4W4Y0 310 aa13.02□□□□□ -0.33
CLCN6-201ENST00000312413 OR52E8Q6IFG1 317 aa13.02□□□□□ -0.33
CLCN6-201ENST00000312413 C3P1Q6ZMU1 363 aa13.02□□□□□ -0.33
CLCN6-201ENST00000312413 TMEM150AQ86TG1 271 aa13.02□□□□□ -0.33
CLCN6-201ENST00000312413 LMF1Q96S06 567 aa13.02□□□□□ -0.33
CLCN6-201ENST00000312413 XYLT2Q9H1B5 865 aa13.02□□□□□ -0.33
CLCN6-201ENST00000312413 A0A1B0GVG6 124 aa13.01□□□□□ -0.33
CLCN6-201ENST00000312413 C2orf74A8MZ97 194 aa13.01□□□□□ -0.33
CLCN6-201ENST00000312413 SCO2O43819 266 aa13.01□□□□□ -0.33
CLCN6-201ENST00000312413 RAB3DO95716 219 aa13.01□□□□□ -0.33
CLCN6-201ENST00000312413 LAMP1P11279 417 aa13.01□□□□□ -0.33
CLCN6-201ENST00000312413 PGCP20142 388 aa13.01□□□□□ -0.33
CLCN6-201ENST00000312413 NR0B1P51843 470 aaKnown RBP13.01□□□□□ -0.33
CLCN6-201ENST00000312413 VSX2P58304 361 aaPredicted RBP13.01□□□□□ -0.33
CLCN6-201ENST00000312413 GALK2Q01415 458 aa13.01□□□□□ -0.33
CLCN6-201ENST00000312413 NXPE4Q6UWF7 544 aa13.01□□□□□ -0.33
CLCN6-201ENST00000312413 REM2Q8IYK8 340 aaPredicted RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms