RNA–Protein interactions for RNA: ENST00000311943.11

SCFD1-201, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 2,016 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-201ENST00000311943 GAB1Q13480 694 aa11.06□□□□□ -0.64
SCFD1-201ENST00000311943 CMPK2Q5EBM0 449 aa11.06□□□□□ -0.64
SCFD1-201ENST00000311943 CCNJQ5T5M9 372 aa11.06□□□□□ -0.64
SCFD1-201ENST00000311943 HLA-DQA1Q5Y7H0 255 aa11.06□□□□□ -0.64
SCFD1-201ENST00000311943 NXNQ6DKJ4 435 aa11.06□□□□□ -0.64
SCFD1-201ENST00000311943 IKBIPQ70UQ0 350 aa11.06□□□□□ -0.64
SCFD1-201ENST00000311943 SLC44A2Q8IWA5 706 aaPredicted RBP11.06□□□□□ -0.64
SCFD1-201ENST00000311943 OR2L13Q8N349 312 aa11.06□□□□□ -0.64
SCFD1-201ENST00000311943 ARSGQ96EG1 525 aa11.06□□□□□ -0.64
SCFD1-201ENST00000311943 GIMAP5Q96F15 307 aa11.06□□□□□ -0.64
SCFD1-201ENST00000311943 ADOQ96SZ5 270 aa11.06□□□□□ -0.64
SCFD1-201ENST00000311943 TTTY12Q9BZ98 90 aa11.06□□□□□ -0.64
SCFD1-201ENST00000311943 INTS9Q9NV88 658 aaKnown RBP11.06□□□□□ -0.64
SCFD1-201ENST00000311943 DDX18Q9NVP1 670 aaKnown RBP11.06□□□□□ -0.64
SCFD1-201ENST00000311943 ATP6V1HQ9UI12 483 aa11.06□□□□□ -0.64
SCFD1-201ENST00000311943 TINAGQ9UJW2 476 aa11.06□□□□□ -0.64
SCFD1-201ENST00000311943 CNOT11Q9UKZ1 510 aaKnown RBP11.06□□□□□ -0.64
SCFD1-201ENST00000311943 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.06□□□□□ -0.64
SCFD1-201ENST00000311943 LRRC3CA6NJW4 275 aa11.06□□□□□ -0.64
SCFD1-201ENST00000311943 HDAC3O15379 428 aa11.06□□□□□ -0.64
SCFD1-201ENST00000311943 GMFGO60234 142 aa11.06□□□□□ -0.64
SCFD1-201ENST00000311943 PLOD3O60568 738 aa11.06□□□□□ -0.64
SCFD1-201ENST00000311943 PSMG1O95456 288 aa11.06□□□□□ -0.64
SCFD1-201ENST00000311943 TCEA1P23193 301 aaKnown RBP11.06□□□□□ -0.64
SCFD1-201ENST00000311943 GPC1P35052 558 aa11.06□□□□□ -0.64
SCFD1-201ENST00000311943 HBA1P69905 142 aa11.06□□□□□ -0.64
SCFD1-201ENST00000311943 ALDH6A1Q02252 535 aaKnown RBP11.06□□□□□ -0.64
SCFD1-201ENST00000311943 ZNF155Q12901 538 aaPredicted RBP11.06□□□□□ -0.64
SCFD1-201ENST00000311943 BIKQ13323 160 aa11.06□□□□□ -0.64
SCFD1-201ENST00000311943 SPANXN4Q5MJ08 99 aa11.06□□□□□ -0.64
SCFD1-201ENST00000311943 OPN5Q6U736 354 aa11.06□□□□□ -0.64
SCFD1-201ENST00000311943 RTL4Q6ZR62 310 aa11.06□□□□□ -0.64
SCFD1-201ENST00000311943 RPRMLQ8N4K4 120 aa11.06□□□□□ -0.64
SCFD1-201ENST00000311943 TMEM178AQ8NBL3 297 aa11.06□□□□□ -0.64
SCFD1-201ENST00000311943 SLC16A11Q8NCK7 471 aa11.06□□□□□ -0.64
SCFD1-201ENST00000311943 GALNT11Q8NCW6 608 aa11.06□□□□□ -0.64
SCFD1-201ENST00000311943 OR7G1Q8NGA0 311 aa11.06□□□□□ -0.64
SCFD1-201ENST00000311943 PAQR8Q8TEZ7 354 aa11.06□□□□□ -0.64
SCFD1-201ENST00000311943 DIO2Q92813 273 aa11.06□□□□□ -0.64
SCFD1-201ENST00000311943 LCORQ96JN0 433 aaPredicted RBP11.06□□□□□ -0.64
SCFD1-201ENST00000311943 GNRHR2Q96P88 292 aa11.06□□□□□ -0.64
SCFD1-201ENST00000311943 AGPAT4Q9NRZ5 378 aa11.06□□□□□ -0.64
SCFD1-201ENST00000311943 GIMAP4Q9NUV9 329 aa11.06□□□□□ -0.64
SCFD1-201ENST00000311943 TMED5Q9Y3A6 229 aa11.06□□□□□ -0.64
SCFD1-201ENST00000311943 SNX8Q9Y5X2 465 aa11.06□□□□□ -0.64
SCFD1-201ENST00000311943 POLEQ07864 2286 aa11.06□□□□□ -0.64
SCFD1-201ENST00000311943 DOPEY2Q9Y3R5 2298 aa11.06□□□□□ -0.64
SCFD1-201ENST00000311943 PCNX3Q9H6A9 2034 aa11.05□□□□□ -0.64
SCFD1-201ENST00000311943 A0A1B0GTH9 108 aa11.05□□□□□ -0.64
SCFD1-201ENST00000311943 A0A1W2PRB8 838 aa11.05□□□□□ -0.64
SCFD1-201ENST00000311943 OR6C76A6NM76 312 aa11.05□□□□□ -0.64
SCFD1-201ENST00000311943 HMGB1P1B2RPK0 211 aaPredicted RBP11.05□□□□□ -0.64
SCFD1-201ENST00000311943 ADAM10O14672 748 aa11.05□□□□□ -0.64
SCFD1-201ENST00000311943 DIAPH2O60879 1101 aa11.05□□□□□ -0.64
SCFD1-201ENST00000311943 SCN2BO60939 215 aa11.05□□□□□ -0.64
SCFD1-201ENST00000311943 ACP2P11117 423 aa11.05□□□□□ -0.64
SCFD1-201ENST00000311943 ZNF24P17028 368 aa11.05□□□□□ -0.64
SCFD1-201ENST00000311943 LBPP18428 481 aa11.05□□□□□ -0.64
SCFD1-201ENST00000311943 NTSP30990 170 aa11.05□□□□□ -0.64
SCFD1-201ENST00000311943 ZFP36L2P47974 494 aaKnown RBP11.05□□□□□ -0.64
SCFD1-201ENST00000311943 NTRK2Q16620 822 aa11.05□□□□□ -0.64
SCFD1-201ENST00000311943 LSM12Q3MHD2 195 aaKnown RBP11.05□□□□□ -0.64
SCFD1-201ENST00000311943 ATG16L1Q676U5 607 aa11.05□□□□□ -0.64
SCFD1-201ENST00000311943 GFRALQ6UXV0 394 aa11.05□□□□□ -0.64
SCFD1-201ENST00000311943 TMEM251Q8N6I4 163 aa11.05□□□□□ -0.64
SCFD1-201ENST00000311943 GOLGA6L1Q8N7Z2 621 aa11.05□□□□□ -0.64
SCFD1-201ENST00000311943 ZFP62Q8NB50 900 aaPredicted RBP11.05□□□□□ -0.64
SCFD1-201ENST00000311943 RFWD2Q8NHY2 731 aa11.05□□□□□ -0.64
SCFD1-201ENST00000311943 PIWIL2Q8TC59 973 aaKnown RBP11.05□□□□□ -0.64
SCFD1-201ENST00000311943 SLC22A8Q8TCC7 542 aa11.05□□□□□ -0.64
SCFD1-201ENST00000311943 HGDQ93099 445 aa11.05□□□□□ -0.64
SCFD1-201ENST00000311943 FAM120BQ96EK7 910 aaKnown RBP11.05□□□□□ -0.64
SCFD1-201ENST00000311943 SERHL2Q9H4I8 314 aa11.05□□□□□ -0.64
SCFD1-201ENST00000311943 CLMPQ9H6B4 373 aa11.05□□□□□ -0.64
SCFD1-201ENST00000311943 SLC6A13Q9NSD5 602 aa11.05□□□□□ -0.64
SCFD1-201ENST00000311943 NOP53Q9NZM5 478 aaKnown RBP11.05□□□□□ -0.64
SCFD1-201ENST00000311943 C19orf53Q9UNZ5 99 aaPredicted RBP11.05□□□□□ -0.64
SCFD1-201ENST00000311943 USH1CQ9Y6N9 552 aa11.05□□□□□ -0.64
SCFD1-201ENST00000311943 NBPF19A0A087WUL8 3843 aa11.05□□□□□ -0.64
SCFD1-201ENST00000311943 CYSRT1A8MQ03 144 aa11.04□□□□□ -0.64
SCFD1-201ENST00000311943 GNB5O14775 395 aa11.04□□□□□ -0.64
SCFD1-201ENST00000311943 ASNA1O43681 348 aa11.04□□□□□ -0.64
SCFD1-201ENST00000311943 REM1O75628 298 aa11.04□□□□□ -0.64
SCFD1-201ENST00000311943 CNR1P21554 472 aa11.04□□□□□ -0.64
SCFD1-201ENST00000311943 CASP3P42574 277 aa11.04□□□□□ -0.64
SCFD1-201ENST00000311943 CDKN2CP42773 168 aa11.04□□□□□ -0.64
SCFD1-201ENST00000311943 PPICP45877 212 aa11.04□□□□□ -0.64
SCFD1-201ENST00000311943 CLDN8P56748 225 aa11.04□□□□□ -0.64
SCFD1-201ENST00000311943 PPIAP62937 165 aaKnown RBP11.04□□□□□ -0.64
SCFD1-201ENST00000311943 KCNJ2P63252 427 aa11.04□□□□□ -0.64
SCFD1-201ENST00000311943 PLCXD2Q0VAA5 305 aa11.04□□□□□ -0.64
SCFD1-201ENST00000311943 RPS6KA2Q15349 733 aa11.04□□□□□ -0.64
SCFD1-201ENST00000311943 CDSNQ15517 529 aa11.04□□□□□ -0.64
SCFD1-201ENST00000311943 CPTPQ5TA50 214 aa11.04□□□□□ -0.64
SCFD1-201ENST00000311943 C6orf163Q5TEZ5 329 aa11.04□□□□□ -0.64
SCFD1-201ENST00000311943 SLC22A10Q63ZE4 541 aa11.04□□□□□ -0.64
SCFD1-201ENST00000311943 PLXDC2Q6UX71 529 aa11.04□□□□□ -0.64
SCFD1-201ENST00000311943 HMGN2P46Q86SG4 172 aa11.04□□□□□ -0.64
SCFD1-201ENST00000311943 ATCAYQ86WG3 371 aa11.04□□□□□ -0.64
SCFD1-201ENST00000311943 SPPL2CQ8IUH8 684 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms