RNA–Protein interactions for RNA: ENST00000310301.8

VPS41-202, Transcript of VPS41, HOPS complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS41, Length 5,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-202ENST00000310301 KCNJ8Q15842 424 aa7.8□□□□□ -1.16
VPS41-202ENST00000310301 GPR33Q49SQ1 333 aa7.8□□□□□ -1.16
VPS41-202ENST00000310301 ATG9BQ674R7 924 aa7.8□□□□□ -1.16
VPS41-202ENST00000310301 ASTLQ6HA08 431 aaPredicted RBP7.8□□□□□ -1.16
VPS41-202ENST00000310301 TMPRSS12Q86WS5 348 aa7.8□□□□□ -1.16
VPS41-202ENST00000310301 SH3YL1Q96HL8 342 aaPredicted RBP7.8□□□□□ -1.16
VPS41-202ENST00000310301 CDKN2AIPNLQ96HQ2 116 aa7.8□□□□□ -1.16
VPS41-202ENST00000310301 DERL2Q9GZP9 239 aa7.8□□□□□ -1.16
VPS41-202ENST00000310301 PDE7BQ9NP56 450 aa7.8□□□□□ -1.16
VPS41-202ENST00000310301 FANCFQ9NPI8 374 aa7.8□□□□□ -1.16
VPS41-202ENST00000310301 MARCH5Q9NX47 278 aa7.8□□□□□ -1.16
VPS41-202ENST00000310301 APOBEC3BQ9UH17 382 aaKnown RBP7.8□□□□□ -1.16
VPS41-202ENST00000310301 SERTAD3Q9UJW9 196 aa7.8□□□□□ -1.16
VPS41-202ENST00000310301 NPIPA1Q9UND3 350 aa7.8□□□□□ -1.16
VPS41-202ENST00000310301 PRSS51A0A1B0GVH4 220 aa7.8□□□□□ -1.16
VPS41-202ENST00000310301 CAPN14A8MX76 684 aa7.8□□□□□ -1.16
VPS41-202ENST00000310301 SDHDO14521 159 aa7.8□□□□□ -1.16
VPS41-202ENST00000310301 BCAS1O75363 584 aaPredicted RBP7.8□□□□□ -1.16
VPS41-202ENST00000310301 SC5DO75845 299 aa7.8□□□□□ -1.16
VPS41-202ENST00000310301 ABLIM3O94929 683 aa7.8□□□□□ -1.16
VPS41-202ENST00000310301 OR8U9P0C7N5 309 aa7.8□□□□□ -1.16
VPS41-202ENST00000310301 TRIM61Q5EBN2 209 aa7.8□□□□□ -1.16
VPS41-202ENST00000310301 REEP3Q6NUK4 255 aa7.8□□□□□ -1.16
VPS41-202ENST00000310301 TMPRSS9Q7Z410 1059 aa7.8□□□□□ -1.16
VPS41-202ENST00000310301 RTN4RL1Q86UN2 441 aaPredicted RBP7.8□□□□□ -1.16
VPS41-202ENST00000310301 NR4A3Q92570 626 aa7.8□□□□□ -1.16
VPS41-202ENST00000310301 THRSPQ92748 146 aa7.8□□□□□ -1.16
VPS41-202ENST00000310301 EFCAB11Q9BUY7 163 aa7.8□□□□□ -1.16
VPS41-202ENST00000310301 ZNF701Q9NV72 531 aaPredicted RBP7.8□□□□□ -1.16
VPS41-202ENST00000310301 TMEM181Q9P2C4 612 aa7.8□□□□□ -1.16
VPS41-202ENST00000310301 HS3ST4Q9Y661 456 aa7.8□□□□□ -1.16
VPS41-202ENST00000310301 F5H5P2 479 aa7.79□□□□□ -1.16
VPS41-202ENST00000310301 WDPCPO95876 746 aa7.79□□□□□ -1.16
VPS41-202ENST00000310301 ARSAP15289 507 aa7.79□□□□□ -1.16
VPS41-202ENST00000310301 HOXC12P31275 282 aa7.79□□□□□ -1.16
VPS41-202ENST00000310301 FRKP42685 505 aaPredicted RBP7.79□□□□□ -1.16
VPS41-202ENST00000310301 RAB5CP51148 216 aa7.79□□□□□ -1.16
VPS41-202ENST00000310301 GRB7Q14451 532 aa7.79□□□□□ -1.16
VPS41-202ENST00000310301 SLC36A3Q495N2 470 aa7.79□□□□□ -1.16
VPS41-202ENST00000310301 SLC22A10Q63ZE4 541 aa7.79□□□□□ -1.16
VPS41-202ENST00000310301 SLC27A4Q6P1M0 643 aa7.79□□□□□ -1.16
VPS41-202ENST00000310301 ZNF550Q7Z398 422 aa7.79□□□□□ -1.16
VPS41-202ENST00000310301 ZFP90Q8TF47 636 aa7.79□□□□□ -1.16
VPS41-202ENST00000310301 C3orf49Q96BT1 292 aa7.79□□□□□ -1.16
VPS41-202ENST00000310301 PIP5K1AQ99755 562 aa7.79□□□□□ -1.16
VPS41-202ENST00000310301 BCL7BQ9BQE9 202 aa7.79□□□□□ -1.16
VPS41-202ENST00000310301 FAAHO00519 579 aa7.79□□□□□ -1.16
VPS41-202ENST00000310301 KCNJ13O60928 360 aa7.79□□□□□ -1.16
VPS41-202ENST00000310301 SLC16A8O95907 504 aa7.79□□□□□ -1.16
VPS41-202ENST00000310301 EBLN1P0CF75 366 aa7.79□□□□□ -1.16
VPS41-202ENST00000310301 CA5AP35218 305 aa7.79□□□□□ -1.16
VPS41-202ENST00000310301 PTH2RP49190 550 aa7.79□□□□□ -1.16
VPS41-202ENST00000310301 FAM214AQ32MH5 1076 aa7.79□□□□□ -1.16
VPS41-202ENST00000310301 FAM122CQ6P4D5 195 aa7.79□□□□□ -1.16
VPS41-202ENST00000310301 PRSS48Q7RTY5 328 aa7.79□□□□□ -1.16
VPS41-202ENST00000310301 TICAM1Q8IUC6 712 aa7.79□□□□□ -1.16
VPS41-202ENST00000310301 TTLQ8NG68 377 aa7.79□□□□□ -1.16
VPS41-202ENST00000310301 NRG4Q8WWG1 115 aa7.79□□□□□ -1.16
VPS41-202ENST00000310301 GATA6Q92908 595 aa7.79□□□□□ -1.16
VPS41-202ENST00000310301 OR2AG1Q9H205 316 aa7.79□□□□□ -1.16
VPS41-202ENST00000310301 TMEM248Q9NWD8 314 aa7.79□□□□□ -1.16
VPS41-202ENST00000310301 CEPT1Q9Y6K0 416 aa7.79□□□□□ -1.16
VPS41-202ENST00000310301 HSPE1-MOB4S4R3N1 261 aa7.79□□□□□ -1.16
VPS41-202ENST00000310301 ZBTB42B2RXF5 422 aa7.79□□□□□ -1.16
VPS41-202ENST00000310301 C2CD4DB7Z1M9 353 aa7.79□□□□□ -1.16
VPS41-202ENST00000310301 PROS1P07225 676 aa7.79□□□□□ -1.16
VPS41-202ENST00000310301 TMEM205Q6UW68 189 aa7.79□□□□□ -1.16
VPS41-202ENST00000310301 OR6N2Q8NGY6 317 aa7.79□□□□□ -1.16
VPS41-202ENST00000310301 DOHHQ9BU89 302 aa7.79□□□□□ -1.16
VPS41-202ENST00000310301 MEAF6Q9HAF1 191 aa7.79□□□□□ -1.16
VPS41-202ENST00000310301 PRDM9Q9NQV7 894 aa7.79□□□□□ -1.16
VPS41-202ENST00000310301 ARMC1Q9NVT9 282 aa7.79□□□□□ -1.16
VPS41-202ENST00000310301 ZNF223Q9UK11 482 aaPredicted RBP7.79□□□□□ -1.16
VPS41-202ENST00000310301 ACSL6Q9UKU0 697 aa7.79□□□□□ -1.16
VPS41-202ENST00000310301 PSAT1Q9Y617 370 aa7.79□□□□□ -1.16
VPS41-202ENST00000310301 CIB4A0PJX0 185 aa7.79□□□□□ -1.16
VPS41-202ENST00000310301 A8MVJ9 347 aa7.79□□□□□ -1.16
VPS41-202ENST00000310301 AGPAT2O15120 278 aa7.79□□□□□ -1.16
VPS41-202ENST00000310301 LCMT2O60294 686 aaKnown RBP7.79□□□□□ -1.16
VPS41-202ENST00000310301 PRKCGP05129 697 aa7.79□□□□□ -1.16
VPS41-202ENST00000310301 CDK1P06493 297 aa7.79□□□□□ -1.16
VPS41-202ENST00000310301 CBLP22681 906 aa7.79□□□□□ -1.16
VPS41-202ENST00000310301 CRISP1P54107 249 aa7.79□□□□□ -1.16
VPS41-202ENST00000310301 RPS13P62277 151 aaKnown RBP7.79□□□□□ -1.16
VPS41-202ENST00000310301 KCNC4Q03721 635 aa7.79□□□□□ -1.16
VPS41-202ENST00000310301 MFSD13AQ14CX5 517 aa7.79□□□□□ -1.16
VPS41-202ENST00000310301 PRAMEF14Q5SWL7 426 aa7.79□□□□□ -1.16
VPS41-202ENST00000310301 NDUFAF5Q5TEU4 345 aa7.79□□□□□ -1.16
VPS41-202ENST00000310301 C3orf33Q6P1S2 294 aa7.79□□□□□ -1.16
VPS41-202ENST00000310301 ENPP6Q6UWR7 440 aa7.79□□□□□ -1.16
VPS41-202ENST00000310301 PRSS58Q8IYP2 241 aa7.79□□□□□ -1.16
VPS41-202ENST00000310301 OR5H6Q8NGV6 325 aa7.79□□□□□ -1.16
VPS41-202ENST00000310301 TOE1Q96GM8 510 aaKnown RBP7.79□□□□□ -1.16
VPS41-202ENST00000310301 OR2M4Q96R27 311 aa7.79□□□□□ -1.16
VPS41-202ENST00000310301 EPYCQ99645 322 aa7.79□□□□□ -1.16
VPS41-202ENST00000310301 TBL1XR1Q9BZK7 514 aa7.79□□□□□ -1.16
VPS41-202ENST00000310301 KCNH6Q9H252 994 aa7.79□□□□□ -1.16
VPS41-202ENST00000310301 LTB4R2Q9NPC1 389 aa7.79□□□□□ -1.16
VPS41-202ENST00000310301 ZDHHC3Q9NYG2 299 aa7.79□□□□□ -1.16
VPS41-202ENST00000310301 MUTYHQ9UIF7 546 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 105.8 ms