RNA–Protein interactions for RNA: ENST00000309017.7

PTPN7-201, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPN7, Length 3,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-201ENST00000309017 THAP7Q9BT49 309 aaPredicted RBP10.52□□□□□ -0.72
PTPN7-201ENST00000309017 MRPL9Q9BYD2 267 aaKnown RBP10.52□□□□□ -0.72
PTPN7-201ENST00000309017 OR51I1Q9H343 314 aa10.52□□□□□ -0.72
PTPN7-201ENST00000309017 PIGUQ9H490 435 aa10.52□□□□□ -0.72
PTPN7-201ENST00000309017 MRPL17Q9NRX2 175 aaKnown RBP10.52□□□□□ -0.72
PTPN7-201ENST00000309017 TRDV1A0A1B0GX56 115 aa10.52□□□□□ -0.73
PTPN7-201ENST00000309017 TMEM129A0AVI4 362 aa10.52□□□□□ -0.73
PTPN7-201ENST00000309017 CPSF4LA6NMK7 179 aaKnown RBP10.52□□□□□ -0.73
PTPN7-201ENST00000309017 NEDD8-MDP1E9PL57 170 aa10.52□□□□□ -0.73
PTPN7-201ENST00000309017 SERPINI2O75830 405 aa10.52□□□□□ -0.73
PTPN7-201ENST00000309017 RB1P06400 928 aa10.52□□□□□ -0.73
PTPN7-201ENST00000309017 ELK1P19419 428 aa10.52□□□□□ -0.73
PTPN7-201ENST00000309017 VIPR1P32241 457 aa10.52□□□□□ -0.73
PTPN7-201ENST00000309017 RPL6Q02878 288 aaKnown RBP10.52□□□□□ -0.73
PTPN7-201ENST00000309017 DSG2Q14126 1118 aa10.52□□□□□ -0.73
PTPN7-201ENST00000309017 NXPE4Q6UWF7 544 aa10.52□□□□□ -0.73
PTPN7-201ENST00000309017 NPAS4Q8IUM7 802 aa10.52□□□□□ -0.73
PTPN7-201ENST00000309017 OR51G2Q8NGK0 314 aa10.52□□□□□ -0.73
PTPN7-201ENST00000309017 NEURL3Q96EH8 262 aa10.52□□□□□ -0.73
PTPN7-201ENST00000309017 BBS4Q96RK4 519 aa10.52□□□□□ -0.73
PTPN7-201ENST00000309017 NEUROD4Q9HD90 331 aa10.52□□□□□ -0.73
PTPN7-201ENST00000309017 EQTNQ9NQ60 294 aa10.52□□□□□ -0.73
PTPN7-201ENST00000309017 ZSCAN32Q9NX65 697 aa10.52□□□□□ -0.73
PTPN7-201ENST00000309017 CIB4A0PJX0 185 aa10.52□□□□□ -0.73
PTPN7-201ENST00000309017 SLC19A2O60779 497 aa10.52□□□□□ -0.73
PTPN7-201ENST00000309017 GSTM3P21266 225 aa10.52□□□□□ -0.73
PTPN7-201ENST00000309017 NNMTP40261 264 aa10.52□□□□□ -0.73
PTPN7-201ENST00000309017 PDE7AQ13946 482 aa10.52□□□□□ -0.73
PTPN7-201ENST00000309017 ARSIQ5FYB1 569 aa10.52□□□□□ -0.73
PTPN7-201ENST00000309017 FAM26DQ5JW98 314 aa10.52□□□□□ -0.73
PTPN7-201ENST00000309017 CDC73Q6P1J9 531 aa10.52□□□□□ -0.73
PTPN7-201ENST00000309017 BHLHB9Q6PI77 547 aa10.52□□□□□ -0.73
PTPN7-201ENST00000309017 C17orf99Q6UX52 265 aa10.52□□□□□ -0.73
PTPN7-201ENST00000309017 PLEKHM3Q6ZWE6 761 aa10.52□□□□□ -0.73
PTPN7-201ENST00000309017 DDX53Q86TM3 631 aaKnown RBP10.52□□□□□ -0.73
PTPN7-201ENST00000309017 COMMD7Q86VX2 200 aa10.52□□□□□ -0.73
PTPN7-201ENST00000309017 ZNF366Q8N895 744 aa10.52□□□□□ -0.73
PTPN7-201ENST00000309017 BEST4Q8NFU0 473 aa10.52□□□□□ -0.73
PTPN7-201ENST00000309017 OR6T1Q8NGN1 323 aa10.52□□□□□ -0.73
PTPN7-201ENST00000309017 OR9A1PQ8NGU1 263 aa10.52□□□□□ -0.73
PTPN7-201ENST00000309017 GLYATL1Q969I3 302 aa10.52□□□□□ -0.73
PTPN7-201ENST00000309017 FAM46AQ96IP4 442 aaKnown RBP10.52□□□□□ -0.73
PTPN7-201ENST00000309017 C19orf43Q9BQ61 176 aa10.52□□□□□ -0.73
PTPN7-201ENST00000309017 OR2AG1Q9H205 316 aa10.52□□□□□ -0.73
PTPN7-201ENST00000309017 RANBP3Q9H6Z4 567 aaPredicted RBP10.52□□□□□ -0.73
PTPN7-201ENST00000309017 GLOD5A6NK44 160 aa10.51□□□□□ -0.73
PTPN7-201ENST00000309017 FOXE1O00358 373 aaPredicted RBP10.51□□□□□ -0.73
PTPN7-201ENST00000309017 C1orf105O95561 183 aa10.51□□□□□ -0.73
PTPN7-201ENST00000309017 SOD1P00441 154 aa10.51□□□□□ -0.73
PTPN7-201ENST00000309017 LALBAP00709 142 aa10.51□□□□□ -0.73
PTPN7-201ENST00000309017 ACSL1P33121 698 aa10.51□□□□□ -0.73
PTPN7-201ENST00000309017 IRS1P35568 1242 aa10.51□□□□□ -0.73
PTPN7-201ENST00000309017 SLC6A11P48066 632 aa10.51□□□□□ -0.73
PTPN7-201ENST00000309017 AP2S1P53680 142 aaPredicted RBP10.51□□□□□ -0.73
PTPN7-201ENST00000309017 PRAMEF14Q5SWL7 426 aa10.51□□□□□ -0.73
PTPN7-201ENST00000309017 PRAMEF13Q5VWM6 474 aa10.51□□□□□ -0.73
PTPN7-201ENST00000309017 RAET1GQ6H3X3 334 aa10.51□□□□□ -0.73
PTPN7-201ENST00000309017 ARL9Q6T311 187 aa10.51□□□□□ -0.73
PTPN7-201ENST00000309017 IDO2Q6ZQW0 420 aa10.51□□□□□ -0.73
PTPN7-201ENST00000309017 C9orf62Q8N4C0 152 aa10.51□□□□□ -0.73
PTPN7-201ENST00000309017 SLC43A3Q8NBI5 491 aa10.51□□□□□ -0.73
PTPN7-201ENST00000309017 ZNF680Q8NEM1 530 aa10.51□□□□□ -0.73
PTPN7-201ENST00000309017 BTBD1Q9H0C5 482 aa10.51□□□□□ -0.73
PTPN7-201ENST00000309017 QRSL1Q9H0R6 528 aaKnown RBP10.51□□□□□ -0.73
PTPN7-201ENST00000309017 DPAGT1Q9H3H5 408 aa10.51□□□□□ -0.73
PTPN7-201ENST00000309017 SLAMF7Q9NQ25 335 aa10.51□□□□□ -0.73
PTPN7-201ENST00000309017 TNFRSF10DQ9UBN6 386 aa10.51□□□□□ -0.73
PTPN7-201ENST00000309017 CDH10Q9Y6N8 788 aa10.51□□□□□ -0.73
PTPN7-201ENST00000309017 GRM6O15303 877 aa10.51□□□□□ -0.73
PTPN7-201ENST00000309017 STATHP02808 62 aa10.51□□□□□ -0.73
PTPN7-201ENST00000309017 LIMS3P0CW19 117 aa10.51□□□□□ -0.73
PTPN7-201ENST00000309017 LIMS4P0CW20 117 aa10.51□□□□□ -0.73
PTPN7-201ENST00000309017 NAT1P18440 290 aa10.51□□□□□ -0.73
PTPN7-201ENST00000309017 HLA-FP30511 346 aa10.51□□□□□ -0.73
PTPN7-201ENST00000309017 OPRD1P41143 372 aa10.51□□□□□ -0.73
PTPN7-201ENST00000309017 SRP9P49458 86 aaKnown RBP10.51□□□□□ -0.73
PTPN7-201ENST00000309017 LASP1Q14847 261 aaKnown RBP10.51□□□□□ -0.73
PTPN7-201ENST00000309017 MINDY4Q4G0A6 757 aa10.51□□□□□ -0.73
PTPN7-201ENST00000309017 BPHLQ86WA6 291 aaPredicted RBP10.51□□□□□ -0.73
PTPN7-201ENST00000309017 PIAS4Q8N2W9 510 aaPredicted RBP10.51□□□□□ -0.73
PTPN7-201ENST00000309017 FIBINQ8TAL6 211 aa10.51□□□□□ -0.73
PTPN7-201ENST00000309017 TTC9Q92623 222 aa10.51□□□□□ -0.73
PTPN7-201ENST00000309017 ZC3HAV1LQ96H79 300 aaKnown RBP10.51□□□□□ -0.73
PTPN7-201ENST00000309017 ARHGAP9Q9BRR9 750 aa10.51□□□□□ -0.73
PTPN7-201ENST00000309017 SPATA5L1Q9BVQ7 753 aa10.51□□□□□ -0.73
PTPN7-201ENST00000309017 KCNN2Q9H2S1 579 aa10.51□□□□□ -0.73
PTPN7-201ENST00000309017 MTG2Q9H4K7 406 aa10.51□□□□□ -0.73
PTPN7-201ENST00000309017 ZNF334Q9HCZ1 680 aaPredicted RBP10.51□□□□□ -0.73
PTPN7-201ENST00000309017 A4GALTQ9NPC4 353 aa10.51□□□□□ -0.73
PTPN7-201ENST00000309017 IMP3Q9NV31 184 aaKnown RBP10.51□□□□□ -0.73
PTPN7-201ENST00000309017 TESQ9UGI8 421 aaKnown RBP10.51□□□□□ -0.73
PTPN7-201ENST00000309017 A4GNTQ9UNA3 340 aa10.51□□□□□ -0.73
PTPN7-201ENST00000309017 CSNK1G3Q9Y6M4 447 aa10.51□□□□□ -0.73
PTPN7-201ENST00000309017 TEX13CA0A0J9YWL9 993 aa10.51□□□□□ -0.73
PTPN7-201ENST00000309017 A8MUA0 341 aa10.51□□□□□ -0.73
PTPN7-201ENST00000309017 HMGN4O00479 90 aa10.51□□□□□ -0.73
PTPN7-201ENST00000309017 KPNA3O00505 521 aaPredicted RBP10.51□□□□□ -0.73
PTPN7-201ENST00000309017 LEFTY1O75610 366 aa10.51□□□□□ -0.73
PTPN7-201ENST00000309017 GNSP15586 552 aa10.51□□□□□ -0.73
PTPN7-201ENST00000309017 ZNF30P17039 623 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms