RNA–Protein interactions for RNA: ENST00000306549.5

PCDHB1-201, Transcript of protocadherin beta 1, humanhuman

APPRIS P1 BASIC

Gene PCDHB1, Length 8,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1-201ENST00000306549 KIAA1024LP59773 190 aa7.92□□□□□ -1.14
PCDHB1-201ENST00000306549 DEFA5Q01523 94 aa7.92□□□□□ -1.14
PCDHB1-201ENST00000306549 SLC3A1Q07837 685 aa7.92□□□□□ -1.14
PCDHB1-201ENST00000306549 AQP12AQ8IXF9 295 aa7.92□□□□□ -1.14
PCDHB1-201ENST00000306549 CD320Q9NPF0 282 aa7.92□□□□□ -1.14
PCDHB1-201ENST00000306549 TMEM9BQ9NQ34 198 aa7.92□□□□□ -1.14
PCDHB1-201ENST00000306549 MMP17Q9ULZ9 603 aa7.92□□□□□ -1.14
PCDHB1-201ENST00000306549 CARD8Q9Y2G2 431 aa7.92□□□□□ -1.14
PCDHB1-201ENST00000306549 ANKRD33BA6NCL7 494 aa7.92□□□□□ -1.14
PCDHB1-201ENST00000306549 EMC8O43402 210 aa7.92□□□□□ -1.14
PCDHB1-201ENST00000306549 BCAS1O75363 584 aaPredicted RBP7.92□□□□□ -1.14
PCDHB1-201ENST00000306549 BANF1O75531 89 aa7.92□□□□□ -1.14
PCDHB1-201ENST00000306549 SPARCP09486 303 aa7.92□□□□□ -1.14
PCDHB1-201ENST00000306549 ARSAP15289 507 aa7.92□□□□□ -1.14
PCDHB1-201ENST00000306549 SLC18A2Q05940 514 aa7.92□□□□□ -1.14
PCDHB1-201ENST00000306549 TRAM2Q15035 370 aa7.92□□□□□ -1.14
PCDHB1-201ENST00000306549 TMEM201Q5SNT2 666 aa7.92□□□□□ -1.14
PCDHB1-201ENST00000306549 TMEM69Q5SWH9 247 aa7.92□□□□□ -1.14
PCDHB1-201ENST00000306549 RANBP10Q6VN20 620 aa7.92□□□□□ -1.14
PCDHB1-201ENST00000306549 SMIM15Q7Z3B0 74 aa7.92□□□□□ -1.14
PCDHB1-201ENST00000306549 SLC51AQ86UW1 340 aa7.92□□□□□ -1.14
PCDHB1-201ENST00000306549 GALNT15Q8N3T1 639 aa7.92□□□□□ -1.14
PCDHB1-201ENST00000306549 WDTC1Q8N5D0 677 aa7.92□□□□□ -1.14
PCDHB1-201ENST00000306549 MDGA1Q8NFP4 955 aa7.92□□□□□ -1.14
PCDHB1-201ENST00000306549 DDIT4LQ96D03 193 aa7.92□□□□□ -1.14
PCDHB1-201ENST00000306549 SLC39A13Q96H72 371 aa7.92□□□□□ -1.14
PCDHB1-201ENST00000306549 SH3YL1Q96HL8 342 aaPredicted RBP7.92□□□□□ -1.14
PCDHB1-201ENST00000306549 DPH7Q9BTV6 452 aa7.92□□□□□ -1.14
PCDHB1-201ENST00000306549 ZNF701Q9NV72 531 aaPredicted RBP7.92□□□□□ -1.14
PCDHB1-201ENST00000306549 MARCH5Q9NX47 278 aa7.92□□□□□ -1.14
PCDHB1-201ENST00000306549 TP53TG5Q9Y2B4 290 aa7.92□□□□□ -1.14
PCDHB1-201ENST00000306549 TIA1P31483 386 aaKnown RBP eCLIP7.92□□□□□ -1.14
PCDHB1-201ENST00000306549 APLNRP35414 380 aa7.92□□□□□ -1.14
PCDHB1-201ENST00000306549 DLSTP36957 453 aa7.92□□□□□ -1.14
PCDHB1-201ENST00000306549 MAGEA6P43360 314 aa7.92□□□□□ -1.14
PCDHB1-201ENST00000306549 PRLHRP49683 370 aa7.92□□□□□ -1.14
PCDHB1-201ENST00000306549 CDH11P55287 796 aa7.92□□□□□ -1.14
PCDHB1-201ENST00000306549 LRRN1Q6UXK5 716 aa7.92□□□□□ -1.14
PCDHB1-201ENST00000306549 SLC16A9Q7RTY1 509 aa7.92□□□□□ -1.14
PCDHB1-201ENST00000306549 GOLGA7Q7Z5G4 137 aa7.92□□□□□ -1.14
PCDHB1-201ENST00000306549 OR56B2PQ8NGI1 322 aa7.92□□□□□ -1.14
PCDHB1-201ENST00000306549 BBS10Q8TAM1 723 aa7.92□□□□□ -1.14
PCDHB1-201ENST00000306549 RAB2BQ8WUD1 216 aa7.92□□□□□ -1.14
PCDHB1-201ENST00000306549 GAB3Q8WWW8 586 aa7.92□□□□□ -1.14
PCDHB1-201ENST00000306549 RHBDF1Q96CC6 855 aa7.92□□□□□ -1.14
PCDHB1-201ENST00000306549 FBXL8Q96CD0 374 aa7.92□□□□□ -1.14
PCDHB1-201ENST00000306549 MSI2Q96DH6 328 aaKnown RBP7.92□□□□□ -1.14
PCDHB1-201ENST00000306549 S100A14Q9HCY8 104 aa7.92□□□□□ -1.14
PCDHB1-201ENST00000306549 ACTR3BQ9P1U1 418 aa7.92□□□□□ -1.14
PCDHB1-201ENST00000306549 COPZ2Q9P299 210 aa7.92□□□□□ -1.14
PCDHB1-201ENST00000306549 A8MT66 165 aa7.92□□□□□ -1.14
PCDHB1-201ENST00000306549 HSBP1L1C9JCN9 74 aa7.92□□□□□ -1.14
PCDHB1-201ENST00000306549 ALDOBP05062 364 aa7.92□□□□□ -1.14
PCDHB1-201ENST00000306549 PORP16435 677 aaPredicted RBP7.92□□□□□ -1.14
PCDHB1-201ENST00000306549 TUBG1P23258 451 aa7.92□□□□□ -1.14
PCDHB1-201ENST00000306549 BLMHQ13867 455 aa7.92□□□□□ -1.14
PCDHB1-201ENST00000306549 COQ5Q5HYK3 327 aa7.92□□□□□ -1.14
PCDHB1-201ENST00000306549 TMEM53Q6P2H8 277 aa7.92□□□□□ -1.14
PCDHB1-201ENST00000306549 ZNF584Q8IVC4 421 aa7.92□□□□□ -1.14
PCDHB1-201ENST00000306549 LGI4Q8N135 537 aa7.92□□□□□ -1.14
PCDHB1-201ENST00000306549 GALNT11Q8NCW6 608 aa7.92□□□□□ -1.14
PCDHB1-201ENST00000306549 FANK1Q8TC84 345 aa7.92□□□□□ -1.14
PCDHB1-201ENST00000306549 SIGLEC10Q96LC7 697 aa7.92□□□□□ -1.14
PCDHB1-201ENST00000306549 TXN2Q99757 166 aa7.92□□□□□ -1.14
PCDHB1-201ENST00000306549 HINT2Q9BX68 163 aa7.92□□□□□ -1.14
PCDHB1-201ENST00000306549 CTPS2Q9NRF8 586 aa7.92□□□□□ -1.14
PCDHB1-201ENST00000306549 ZFP57Q9NU63 452 aa7.92□□□□□ -1.14
PCDHB1-201ENST00000306549 THAP10Q9P2Z0 257 aaPredicted RBP7.92□□□□□ -1.14
PCDHB1-201ENST00000306549 HIF3AQ9Y2N7 669 aa7.92□□□□□ -1.14
PCDHB1-201ENST00000306549 PMF1-BGLAPU3KQ54 211 aa7.92□□□□□ -1.14
PCDHB1-201ENST00000306549 TCRBV7S2A1N4TA0A589 114 aa7.92□□□□□ -1.14
PCDHB1-201ENST00000306549 MEIS3P2A8K0S8 358 aa7.92□□□□□ -1.14
PCDHB1-201ENST00000306549 GNAO1P09471 354 aa7.92□□□□□ -1.14
PCDHB1-201ENST00000306549 HTRA4P83105 476 aaPredicted RBP7.92□□□□□ -1.14
PCDHB1-201ENST00000306549 ARL6IP1Q15041 203 aa7.92□□□□□ -1.14
PCDHB1-201ENST00000306549 RAB11BQ15907 218 aa7.92□□□□□ -1.14
PCDHB1-201ENST00000306549 GPR153Q6NV75 609 aa7.92□□□□□ -1.14
PCDHB1-201ENST00000306549 ISLR2Q6UXK2 745 aa7.92□□□□□ -1.14
PCDHB1-201ENST00000306549 MARCH9Q86YJ5 346 aa7.92□□□□□ -1.14
PCDHB1-201ENST00000306549 CLDN19Q8N6F1 224 aa7.92□□□□□ -1.14
PCDHB1-201ENST00000306549 LENG8Q96PV6 779 aaPredicted RBP7.92□□□□□ -1.14
PCDHB1-201ENST00000306549 CCNL2Q96S94 520 aaPredicted RBP7.92□□□□□ -1.14
PCDHB1-201ENST00000306549 WDR55Q9H6Y2 383 aaPredicted RBP7.92□□□□□ -1.14
PCDHB1-201ENST00000306549 PHYHO14832 338 aa7.92□□□□□ -1.14
PCDHB1-201ENST00000306549 SLC34A2O95436 690 aa7.92□□□□□ -1.14
PCDHB1-201ENST00000306549 ERP29P30040 261 aaKnown RBP7.92□□□□□ -1.14
PCDHB1-201ENST00000306549 ACTC1P68032 377 aa7.92□□□□□ -1.14
PCDHB1-201ENST00000306549 ACTA1P68133 377 aa7.92□□□□□ -1.14
PCDHB1-201ENST00000306549 PTPRCAPQ14761 206 aa7.92□□□□□ -1.14
PCDHB1-201ENST00000306549 LIN52Q52LA3 116 aa7.92□□□□□ -1.14
PCDHB1-201ENST00000306549 GALNT12Q8IXK2 581 aa7.92□□□□□ -1.14
PCDHB1-201ENST00000306549 PLD6Q8N2A8 252 aaKnown RBP7.92□□□□□ -1.14
PCDHB1-201ENST00000306549 DCBLD1Q8N8Z6 715 aa7.92□□□□□ -1.14
PCDHB1-201ENST00000306549 ZNF442Q9H7R0 627 aa7.92□□□□□ -1.14
PCDHB1-201ENST00000306549 FNDC1Q4ZHG4 1894 aaPredicted RBP7.91□□□□□ -1.14
PCDHB1-201ENST00000306549 VILLO15195 856 aa7.91□□□□□ -1.14
PCDHB1-201ENST00000306549 TMEM63AO94886 807 aa7.91□□□□□ -1.14
PCDHB1-201ENST00000306549 ZNF28P17035 718 aa7.91□□□□□ -1.14
PCDHB1-201ENST00000306549 FMO3P31513 532 aa7.91□□□□□ -1.14
PCDHB1-201ENST00000306549 SLAMF1Q13291 335 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms