RNA–Protein interactions for RNA: ENST00000303531.11

PRKCB-201, Transcript of protein kinase C beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKCB, Length 7,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-201ENST00000303531 TMEM184CQ9NVA4 438 aa13.24□□□□□ -0.29
PRKCB-201ENST00000303531 IL17CQ9P0M4 197 aa13.24□□□□□ -0.29
PRKCB-201ENST00000303531 CHD2O14647 1828 aaKnown RBP13.24□□□□□ -0.29
PRKCB-201ENST00000303531 TRIM64CA6NLI5 447 aa13.24□□□□□ -0.29
PRKCB-201ENST00000303531 FMO6PO60774 539 aa13.24□□□□□ -0.29
PRKCB-201ENST00000303531 RAB3BP20337 219 aa13.24□□□□□ -0.29
PRKCB-201ENST00000303531 SELENOWP63302 87 aa13.24□□□□□ -0.29
PRKCB-201ENST00000303531 LEG1Q6P5S2 330 aa13.24□□□□□ -0.29
PRKCB-201ENST00000303531 URM1Q9BTM9 101 aaKnown RBP13.24□□□□□ -0.29
PRKCB-201ENST00000303531 KDM3BQ7LBC6 1761 aa13.24□□□□□ -0.29
PRKCB-201ENST00000303531 AGAP5A6NIR3 686 aa13.24□□□□□ -0.29
PRKCB-201ENST00000303531 CDKN2CP42773 168 aa13.24□□□□□ -0.29
PRKCB-201ENST00000303531 RHEBQ15382 184 aa13.24□□□□□ -0.29
PRKCB-201ENST00000303531 HAGHLQ6PII5 290 aaPredicted RBP13.24□□□□□ -0.29
PRKCB-201ENST00000303531 PAPD5Q8NDF8 572 aaKnown RBP13.24□□□□□ -0.29
PRKCB-201ENST00000303531 SNIP1Q8TAD8 396 aaKnown RBP13.24□□□□□ -0.29
PRKCB-201ENST00000303531 PGAM5Q96HS1 289 aa13.24□□□□□ -0.29
PRKCB-201ENST00000303531 MTHFD2LQ9H903 347 aaPredicted RBP13.24□□□□□ -0.29
PRKCB-201ENST00000303531 SLC39A1Q9NY26 324 aa13.24□□□□□ -0.29
PRKCB-201ENST00000303531 NAV1Q8NEY1 1877 aa13.24□□□□□ -0.29
PRKCB-201ENST00000303531 H3BMQ9 156 aa13.24□□□□□ -0.29
PRKCB-201ENST00000303531 PRDX3P30048 256 aaKnown RBP13.24□□□□□ -0.29
PRKCB-201ENST00000303531 GALK2Q01415 458 aa13.24□□□□□ -0.29
PRKCB-201ENST00000303531 CLLU1OSQ5K130 101 aa13.24□□□□□ -0.29
PRKCB-201ENST00000303531 ZER1Q7Z7L7 766 aa13.24□□□□□ -0.29
PRKCB-201ENST00000303531 MS4A15Q8N5U1 240 aa13.24□□□□□ -0.29
PRKCB-201ENST00000303531 ABHD11Q8NFV4 315 aa13.24□□□□□ -0.29
PRKCB-201ENST00000303531 SLC25A44Q96H78 314 aaPredicted RBP13.24□□□□□ -0.29
PRKCB-201ENST00000303531 COG8Q96MW5 612 aa13.24□□□□□ -0.29
PRKCB-201ENST00000303531 MTG2Q9H4K7 406 aa13.24□□□□□ -0.29
PRKCB-201ENST00000303531 ENY2Q9NPA8 101 aa13.24□□□□□ -0.29
PRKCB-201ENST00000303531 NLKQ9UBE8 527 aa13.24□□□□□ -0.29
PRKCB-201ENST00000303531 M0R3H8 397 aa13.24□□□□□ -0.29
PRKCB-201ENST00000303531 FOSL2P15408 326 aa13.24□□□□□ -0.29
PRKCB-201ENST00000303531 CD40LGP29965 261 aa13.24□□□□□ -0.29
PRKCB-201ENST00000303531 ZNF440Q8IYI8 595 aa13.24□□□□□ -0.29
PRKCB-201ENST00000303531 OR7G3Q8NG95 312 aa13.24□□□□□ -0.29
PRKCB-201ENST00000303531 CREBZFQ9NS37 354 aa13.24□□□□□ -0.29
PRKCB-201ENST00000303531 CREBL2O60519 120 aaPredicted RBP13.23□□□□□ -0.29
PRKCB-201ENST00000303531 SYNGR4O95473 234 aa13.23□□□□□ -0.29
PRKCB-201ENST00000303531 CD3GP09693 182 aa13.23□□□□□ -0.29
PRKCB-201ENST00000303531 AMY2BP19961 511 aa13.23□□□□□ -0.29
PRKCB-201ENST00000303531 ART1P52961 327 aa13.23□□□□□ -0.29
PRKCB-201ENST00000303531 HSD11B2P80365 405 aa13.23□□□□□ -0.29
PRKCB-201ENST00000303531 RAB33AQ14088 237 aa13.23□□□□□ -0.29
PRKCB-201ENST00000303531 OR5AR1Q8NGP9 310 aa13.23□□□□□ -0.29
PRKCB-201ENST00000303531 CREB3L4Q8TEY5 395 aa13.23□□□□□ -0.29
PRKCB-201ENST00000303531 ARL6Q9H0F7 186 aa13.23□□□□□ -0.29
PRKCB-201ENST00000303531 PELI2Q9HAT8 420 aa13.23□□□□□ -0.29
PRKCB-201ENST00000303531 OR2S2Q9NQN1 319 aa13.23□□□□□ -0.29
PRKCB-201ENST00000303531 SLC7A11Q9UPY5 501 aa13.23□□□□□ -0.29
PRKCB-201ENST00000303531 TRAPPC13A5PLN9 417 aa13.23□□□□□ -0.29
PRKCB-201ENST00000303531 C5AR1P21730 350 aa13.23□□□□□ -0.29
PRKCB-201ENST00000303531 MAP4K2Q12851 820 aa13.23□□□□□ -0.29
PRKCB-201ENST00000303531 FIGLAQ6QHK4 219 aa13.23□□□□□ -0.29
PRKCB-201ENST00000303531 NEDD4LQ96PU5 975 aa13.23□□□□□ -0.29
PRKCB-201ENST00000303531 DPCDQ9BVM2 203 aaPredicted RBP13.23□□□□□ -0.29
PRKCB-201ENST00000303531 MYNNQ9NPC7 610 aa13.23□□□□□ -0.29
PRKCB-201ENST00000303531 EMCNQ9ULC0 261 aa13.23□□□□□ -0.29
PRKCB-201ENST00000303531 COL2A1P02458 1487 aaPredicted RBP13.23□□□□□ -0.29
PRKCB-201ENST00000303531 H7C417 338 aa13.23□□□□□ -0.29
PRKCB-201ENST00000303531 DUX1O43812 170 aa13.23□□□□□ -0.29
PRKCB-201ENST00000303531 RPS17P08708 135 aaKnown RBP13.23□□□□□ -0.29
PRKCB-201ENST00000303531 GBX1Q14549 363 aa13.23□□□□□ -0.29
PRKCB-201ENST00000303531 COL28A1Q2UY09 1125 aa13.23□□□□□ -0.29
PRKCB-201ENST00000303531 SFRP4Q6FHJ7 346 aaPredicted RBP13.23□□□□□ -0.29
PRKCB-201ENST00000303531 ZNF611Q8N823 705 aa13.23□□□□□ -0.29
PRKCB-201ENST00000303531 ZBTB20Q9HC78 741 aaPredicted RBP13.23□□□□□ -0.29
PRKCB-201ENST00000303531 VAPAQ9P0L0 249 aa13.23□□□□□ -0.29
PRKCB-201ENST00000303531 BORCS7-ASMTA0A0B4J1R7 106 aa13.23□□□□□ -0.29
PRKCB-201ENST00000303531 PLATP00750 562 aa13.23□□□□□ -0.29
PRKCB-201ENST00000303531 JMJD7P0C870 316 aa13.23□□□□□ -0.29
PRKCB-201ENST00000303531 RUNX3Q13761 415 aa13.23□□□□□ -0.29
PRKCB-201ENST00000303531 TMEM168Q9H0V1 697 aa13.23□□□□□ -0.29
PRKCB-201ENST00000303531 ACOT13Q9NPJ3 140 aa13.23□□□□□ -0.29
PRKCB-201ENST00000303531 PRELID1Q9Y255 219 aa13.23□□□□□ -0.29
PRKCB-201ENST00000303531 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.23□□□□□ -0.29
PRKCB-201ENST00000303531 A0A1W2PQL4 384 aaPredicted RBP13.23□□□□□ -0.29
PRKCB-201ENST00000303531 UGDHO60701 494 aa13.23□□□□□ -0.29
PRKCB-201ENST00000303531 IL4RP24394 825 aa13.23□□□□□ -0.29
PRKCB-201ENST00000303531 PER3P56645 1201 aa13.23□□□□□ -0.29
PRKCB-201ENST00000303531 LAS2Q8IYD9 372 aa13.23□□□□□ -0.29
PRKCB-201ENST00000303531 CACNG6Q9BXT2 260 aa13.23□□□□□ -0.29
PRKCB-201ENST00000303531 SLC17A9Q9BYT1 436 aa13.23□□□□□ -0.29
PRKCB-201ENST00000303531 ERCC1P07992 297 aaPredicted RBP13.23□□□□□ -0.29
PRKCB-201ENST00000303531 MAGEA6P43360 314 aa13.23□□□□□ -0.29
PRKCB-201ENST00000303531 NKX2-5P52952 324 aaPredicted RBP13.23□□□□□ -0.29
PRKCB-201ENST00000303531 PIN1Q13526 163 aaPredicted RBP13.23□□□□□ -0.29
PRKCB-201ENST00000303531 PIANPQ8IYJ0 282 aa13.23□□□□□ -0.29
PRKCB-201ENST00000303531 SYNPOQ8N3V7 929 aa13.23□□□□□ -0.29
PRKCB-201ENST00000303531 SAMD8Q96LT4 415 aa13.23□□□□□ -0.29
PRKCB-201ENST00000303531 H7C2Y5 167 aa13.22□□□□□ -0.29
PRKCB-201ENST00000303531 APBB3O95704 486 aa13.22□□□□□ -0.29
PRKCB-201ENST00000303531 ZNF33BQ06732 778 aa13.22□□□□□ -0.29
PRKCB-201ENST00000303531 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.22□□□□□ -0.293e-11■■□□□ 12.1
PRKCB-201ENST00000303531 TMEM173Q86WV6 379 aaPredicted RBP13.22□□□□□ -0.29
PRKCB-201ENST00000303531 ANKK1Q8NFD2 765 aa13.22□□□□□ -0.29
PRKCB-201ENST00000303531 CCDC86Q9H6F5 360 aaKnown RBP13.22□□□□□ -0.29
PRKCB-201ENST00000303531 B3GNT9Q6UX72 402 aa13.22□□□□□ -0.29
PRKCB-201ENST00000303531 DRAXINQ8NBI3 349 aaPredicted RBP13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms