RNA–Protein interactions for RNA: ENST00000303354.10

SCN9A-201, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN9A, Length 9,786 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-201ENST00000303354 MRPL21Q7Z2W9 205 aaKnown RBP7.4□□□□□ -1.23
SCN9A-201ENST00000303354 GRAMD2AQ8IUY3 354 aa7.4□□□□□ -1.23
SCN9A-201ENST00000303354 TMEM151AQ8N4L1 468 aa7.4□□□□□ -1.23
SCN9A-201ENST00000303354 IFI44Q8TCB0 444 aa7.4□□□□□ -1.23
SCN9A-201ENST00000303354 HERPUD2Q9BSE4 406 aa7.4□□□□□ -1.23
SCN9A-201ENST00000303354 NARFLQ9H6Q4 476 aa7.4□□□□□ -1.23
SCN9A-201ENST00000303354 POLE3Q9NRF9 147 aa7.4□□□□□ -1.23
SCN9A-201ENST00000303354 PCDHGA1Q9Y5H4 931 aa7.4□□□□□ -1.23
SCN9A-201ENST00000303354 A0A0J9YY10 115 aa7.4□□□□□ -1.23
SCN9A-201ENST00000303354 SLC1A7O00341 560 aa7.4□□□□□ -1.23
SCN9A-201ENST00000303354 RAD51DO75771 328 aa7.4□□□□□ -1.23
SCN9A-201ENST00000303354 S1PR1P21453 382 aa7.4□□□□□ -1.23
SCN9A-201ENST00000303354 IGFBP6P24592 240 aaPredicted RBP7.4□□□□□ -1.23
SCN9A-201ENST00000303354 TNFRSF4P43489 277 aa7.4□□□□□ -1.23
SCN9A-201ENST00000303354 VASPP50552 380 aaPredicted RBP7.4□□□□□ -1.23
SCN9A-201ENST00000303354 TRAM2Q15035 370 aa7.4□□□□□ -1.23
SCN9A-201ENST00000303354 GRK1Q15835 563 aa7.4□□□□□ -1.23
SCN9A-201ENST00000303354 MTFR2Q6P444 385 aa7.4□□□□□ -1.23
SCN9A-201ENST00000303354 OR51T1Q8NGJ9 327 aa7.4□□□□□ -1.23
SCN9A-201ENST00000303354 PROKR1Q8TCW9 393 aa7.4□□□□□ -1.23
SCN9A-201ENST00000303354 ARSGQ96EG1 525 aa7.4□□□□□ -1.23
SCN9A-201ENST00000303354 SGTBQ96EQ0 304 aa7.4□□□□□ -1.23
SCN9A-201ENST00000303354 GPR22Q99680 433 aa7.4□□□□□ -1.23
SCN9A-201ENST00000303354 SLC6A15Q9H2J7 730 aa7.4□□□□□ -1.23
SCN9A-201ENST00000303354 ZDHHC7Q9NXF8 308 aa7.4□□□□□ -1.23
SCN9A-201ENST00000303354 MYO5BQ9ULV0 1848 aa7.4□□□□□ -1.23
SCN9A-201ENST00000303354 PLIN4Q96Q06 1357 aa7.4□□□□□ -1.23
SCN9A-201ENST00000303354 LINC01553A4QN01 128 aa7.4□□□□□ -1.23
SCN9A-201ENST00000303354 ANKRD34BA5PLL1 514 aa7.4□□□□□ -1.23
SCN9A-201ENST00000303354 SORBS2O94875 1100 aaKnown RBP7.4□□□□□ -1.23
SCN9A-201ENST00000303354 HMGN1P05114 100 aa7.4□□□□□ -1.23
SCN9A-201ENST00000303354 RHDQ02161 417 aa7.4□□□□□ -1.23
SCN9A-201ENST00000303354 ZNF33AQ06730 810 aa7.4□□□□□ -1.23
SCN9A-201ENST00000303354 HES5Q5TA89 166 aa7.4□□□□□ -1.23
SCN9A-201ENST00000303354 ZNF554Q86TJ5 538 aa7.4□□□□□ -1.23
SCN9A-201ENST00000303354 AVL9Q8NBF6 648 aa7.4□□□□□ -1.23
SCN9A-201ENST00000303354 OR13H1Q8NG92 308 aa7.4□□□□□ -1.23
SCN9A-201ENST00000303354 NEDD4LQ96PU5 975 aa7.4□□□□□ -1.23
SCN9A-201ENST00000303354 MNTQ99583 582 aa7.4□□□□□ -1.23
SCN9A-201ENST00000303354 MROQ9BYG7 248 aa7.4□□□□□ -1.23
SCN9A-201ENST00000303354 TIA1P31483 386 aaKnown RBP eCLIP7.39□□□□□ -1.238e-10■■■■□ 22.6
SCN9A-201ENST00000303354 PSMD7P51665 324 aa7.39□□□□□ -1.23
SCN9A-201ENST00000303354 ADAM17P78536 824 aa7.39□□□□□ -1.23
SCN9A-201ENST00000303354 PATE1Q8WXA2 126 aa7.39□□□□□ -1.23
SCN9A-201ENST00000303354 SAMD8Q96LT4 415 aa7.39□□□□□ -1.23
SCN9A-201ENST00000303354 CXorf21Q9HAI6 301 aa7.39□□□□□ -1.23
SCN9A-201ENST00000303354 ZNF160Q9HCG1 818 aa7.39□□□□□ -1.23
SCN9A-201ENST00000303354 OR2S2Q9NQN1 319 aa7.39□□□□□ -1.23
SCN9A-201ENST00000303354 CNIH4Q9P003 139 aa7.39□□□□□ -1.23
SCN9A-201ENST00000303354 SOCS7O14512 581 aa7.39□□□□□ -1.23
SCN9A-201ENST00000303354 GPR37L1O60883 481 aa7.39□□□□□ -1.23
SCN9A-201ENST00000303354 CBX7O95931 251 aa7.39□□□□□ -1.23
SCN9A-201ENST00000303354 S100A6P06703 90 aa7.39□□□□□ -1.23
SCN9A-201ENST00000303354 CELP19835 753 aa7.39□□□□□ -1.23
SCN9A-201ENST00000303354 XIAPP98170 497 aa7.39□□□□□ -1.23
SCN9A-201ENST00000303354 RBPJQ06330 500 aa7.39□□□□□ -1.23
SCN9A-201ENST00000303354 DCTN2Q13561 401 aaKnown RBP7.39□□□□□ -1.23
SCN9A-201ENST00000303354 DRICH1Q6PGQ1 229 aaPredicted RBP7.39□□□□□ -1.23
SCN9A-201ENST00000303354 CEACAM19Q7Z692 300 aa7.39□□□□□ -1.23
SCN9A-201ENST00000303354 SCCPDHQ8NBX0 429 aa7.39□□□□□ -1.23
SCN9A-201ENST00000303354 MFSD8Q8NHS3 518 aa7.39□□□□□ -1.23
SCN9A-201ENST00000303354 FAM174AQ8TBP5 190 aa7.39□□□□□ -1.23
SCN9A-201ENST00000303354 KAT8Q9H7Z6 458 aaKnown RBP7.39□□□□□ -1.23
SCN9A-201ENST00000303354 ANKRA2Q9H9E1 313 aa7.39□□□□□ -1.23
SCN9A-201ENST00000303354 PARP4Q9UKK3 1724 aaKnown RBP7.39□□□□□ -1.23
SCN9A-201ENST00000303354 TRBV2A0A0J9YWF9 115 aa7.39□□□□□ -1.23
SCN9A-201ENST00000303354 NRG2O14511 850 aaPredicted RBP7.39□□□□□ -1.23
SCN9A-201ENST00000303354 TAS2R38P59533 333 aa7.39□□□□□ -1.23
SCN9A-201ENST00000303354 ASRGL1Q7L266 308 aa7.39□□□□□ -1.23
SCN9A-201ENST00000303354 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.39□□□□□ -1.23
SCN9A-201ENST00000303354 VRK2Q86Y07 508 aa7.39□□□□□ -1.23
SCN9A-201ENST00000303354 KDM1BQ8NB78 822 aa7.39□□□□□ -1.23
SCN9A-201ENST00000303354 GCDHQ92947 438 aaPredicted RBP7.39□□□□□ -1.23
SCN9A-201ENST00000303354 SLC41A3Q96GZ6 507 aa7.39□□□□□ -1.23
SCN9A-201ENST00000303354 PDLIM7Q9NR12 457 aa7.39□□□□□ -1.23
SCN9A-201ENST00000303354 PLEK2Q9NYT0 353 aa7.39□□□□□ -1.23
SCN9A-201ENST00000303354 OR14I1A6ND48 311 aa7.39□□□□□ -1.23
SCN9A-201ENST00000303354 TVP23AA6NH52 213 aa7.39□□□□□ -1.23
SCN9A-201ENST00000303354 CD3GP09693 182 aa7.39□□□□□ -1.23
SCN9A-201ENST00000303354 MPC1LP0DKB6 136 aa7.39□□□□□ -1.23
SCN9A-201ENST00000303354 AGFG1P52594 562 aaKnown RBP7.39□□□□□ -1.23
SCN9A-201ENST00000303354 RIDAP52758 137 aaKnown RBP7.39□□□□□ -1.23
SCN9A-201ENST00000303354 AP3S2P59780 193 aa7.39□□□□□ -1.23
SCN9A-201ENST00000303354 MFSD13AQ14CX5 517 aa7.39□□□□□ -1.23
SCN9A-201ENST00000303354 TP53I3Q53FA7 332 aa7.39□□□□□ -1.23
SCN9A-201ENST00000303354 SLC44A3Q8N4M1 653 aa7.39□□□□□ -1.23
SCN9A-201ENST00000303354 OR4C15Q8NGM1 316 aa7.39□□□□□ -1.23
SCN9A-201ENST00000303354 C7orf34Q96L11 122 aa7.39□□□□□ -1.23
SCN9A-201ENST00000303354 MND1Q9BWT6 205 aa7.39□□□□□ -1.23
SCN9A-201ENST00000303354 TTYH1Q9H313 450 aaPredicted RBP7.39□□□□□ -1.23
SCN9A-201ENST00000303354 TM9SF3Q9HD45 589 aa7.39□□□□□ -1.23
SCN9A-201ENST00000303354 MBD2Q9UBB5 411 aa7.39□□□□□ -1.23
SCN9A-201ENST00000303354 ZNF221Q9UK13 617 aa7.39□□□□□ -1.23
SCN9A-201ENST00000303354 KIAA0355O15063 1070 aa7.39□□□□□ -1.23
SCN9A-201ENST00000303354 HRGP04196 525 aa7.39□□□□□ -1.23
SCN9A-201ENST00000303354 ANXA8P13928 327 aa7.39□□□□□ -1.23
SCN9A-201ENST00000303354 IFNGR1P15260 489 aa7.39□□□□□ -1.23
SCN9A-201ENST00000303354 AMY2BP19961 511 aa7.39□□□□□ -1.23
SCN9A-201ENST00000303354 RGRP47804 291 aa7.39□□□□□ -1.23
SCN9A-201ENST00000303354 REEP3Q6NUK4 255 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms