RNA–Protein interactions for RNA: ENST00000302528.11

CLIP1-201, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene CLIP1, Length 5,833 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-201ENST00000302528 INSL6Q9Y581 213 aa9.9□□□□□ -0.82
CLIP1-201ENST00000302528 HTRA2O43464 458 aaPredicted RBP9.9□□□□□ -0.82
CLIP1-201ENST00000302528 BCAS2O75934 225 aaPredicted RBP9.9□□□□□ -0.82
CLIP1-201ENST00000302528 SLC22A5O76082 557 aa9.9□□□□□ -0.82
CLIP1-201ENST00000302528 AHSGP02765 367 aa9.9□□□□□ -0.82
CLIP1-201ENST00000302528 SLC2A1P11166 492 aa9.9□□□□□ -0.82
CLIP1-201ENST00000302528 P2RX1P51575 399 aa9.9□□□□□ -0.82
CLIP1-201ENST00000302528 TAS2R30P59541 319 aa9.9□□□□□ -0.82
CLIP1-201ENST00000302528 SNRPD2P62316 118 aaKnown RBP9.9□□□□□ -0.82
CLIP1-201ENST00000302528 TAP2Q03519 686 aa9.9□□□□□ -0.82
CLIP1-201ENST00000302528 TLE1Q04724 770 aa9.9□□□□□ -0.82
CLIP1-201ENST00000302528 TMEM115Q12893 351 aaPredicted RBP9.9□□□□□ -0.82
CLIP1-201ENST00000302528 FGL2Q14314 439 aa9.9□□□□□ -0.82
CLIP1-201ENST00000302528 GRM2Q14416 872 aa9.9□□□□□ -0.82
CLIP1-201ENST00000302528 SPHARQ15513 63 aa9.9□□□□□ -0.82
CLIP1-201ENST00000302528 RAB30Q15771 203 aa9.9□□□□□ -0.82
CLIP1-201ENST00000302528 AGAP7PQ5VUJ5 663 aa9.9□□□□□ -0.82
CLIP1-201ENST00000302528 AGAP6Q5VW22 663 aa9.9□□□□□ -0.82
CLIP1-201ENST00000302528 SLC22A10Q63ZE4 541 aa9.9□□□□□ -0.82
CLIP1-201ENST00000302528 NCBP2-AS2Q69YL0 99 aa9.9□□□□□ -0.82
CLIP1-201ENST00000302528 TMEM150AQ86TG1 271 aa9.9□□□□□ -0.82
CLIP1-201ENST00000302528 LRRC25Q8N386 305 aaPredicted RBP9.9□□□□□ -0.82
CLIP1-201ENST00000302528 ZFP41Q8N8Y5 198 aa9.9□□□□□ -0.82
CLIP1-201ENST00000302528 OR7G1Q8NGA0 311 aa9.9□□□□□ -0.82
CLIP1-201ENST00000302528 ST7LQ8TDW4 575 aa9.9□□□□□ -0.82
CLIP1-201ENST00000302528 SLAMF9Q96A28 289 aa9.9□□□□□ -0.82
CLIP1-201ENST00000302528 LRIG1Q96JA1 1093 aa9.9□□□□□ -0.82
CLIP1-201ENST00000302528 MUS81Q96NY9 551 aa9.9□□□□□ -0.82
CLIP1-201ENST00000302528 AGAP4Q96P64 663 aa9.9□□□□□ -0.82
CLIP1-201ENST00000302528 MGLLQ99685 303 aa9.9□□□□□ -0.82
CLIP1-201ENST00000302528 KCNK13Q9HB14 408 aa9.9□□□□□ -0.82
CLIP1-201ENST00000302528 ARHGAP23Q9P227 1491 aa9.9□□□□□ -0.82
CLIP1-201ENST00000302528 C20orf202A1L168 122 aa9.9□□□□□ -0.82
CLIP1-201ENST00000302528 F5H5P2 479 aa9.9□□□□□ -0.82
CLIP1-201ENST00000302528 ARPC5O15511 151 aa9.9□□□□□ -0.82
CLIP1-201ENST00000302528 ARAFP10398 606 aa9.9□□□□□ -0.82
CLIP1-201ENST00000302528 RNH1P13489 461 aaKnown RBP9.9□□□□□ -0.82
CLIP1-201ENST00000302528 TMEM11P17152 192 aa9.9□□□□□ -0.82
CLIP1-201ENST00000302528 NPBWR1P48145 328 aa9.9□□□□□ -0.82
CLIP1-201ENST00000302528 MC2RQ01718 297 aa9.9□□□□□ -0.82
CLIP1-201ENST00000302528 SLAMF1Q13291 335 aa9.9□□□□□ -0.82
CLIP1-201ENST00000302528 KCNJ11Q14654 390 aa9.9□□□□□ -0.82
CLIP1-201ENST00000302528 DEFB134Q4QY38 66 aa9.9□□□□□ -0.82
CLIP1-201ENST00000302528 TMEM107Q6UX40 140 aa9.9□□□□□ -0.82
CLIP1-201ENST00000302528 MS4A15Q8N5U1 240 aa9.9□□□□□ -0.82
CLIP1-201ENST00000302528 OR5AK2Q8NH90 309 aa9.9□□□□□ -0.82
CLIP1-201ENST00000302528 KIAA1191Q96A73 305 aa9.9□□□□□ -0.82
CLIP1-201ENST00000302528 SNX18Q96RF0 628 aa9.9□□□□□ -0.82
CLIP1-201ENST00000302528 ZNF334Q9HCZ1 680 aaPredicted RBP9.9□□□□□ -0.82
CLIP1-201ENST00000302528 TEX10Q9NXF1 929 aaPredicted RBP9.9□□□□□ -0.82
CLIP1-201ENST00000302528 MYEF2Q9P2K5 600 aaKnown RBP9.9□□□□□ -0.82
CLIP1-201ENST00000302528 GLSO94925 669 aaPredicted RBP9.9□□□□□ -0.82
CLIP1-201ENST00000302528 SMPD1P17405 629 aa9.9□□□□□ -0.82
CLIP1-201ENST00000302528 PRMT2P55345 433 aa9.9□□□□□ -0.82
CLIP1-201ENST00000302528 KCNAB2Q13303 367 aa9.9□□□□□ -0.82
CLIP1-201ENST00000302528 PCGF3Q3KNV8 242 aa9.9□□□□□ -0.82
CLIP1-201ENST00000302528 UGT3A2Q3SY77 523 aa9.9□□□□□ -0.82
CLIP1-201ENST00000302528 EEF1AKMT2Q5JPI9 291 aaKnown RBP9.9□□□□□ -0.82
CLIP1-201ENST00000302528 STEAP3Q658P3 488 aa9.9□□□□□ -0.82
CLIP1-201ENST00000302528 CCBE1Q6UXH8 406 aaPredicted RBP9.9□□□□□ -0.82
CLIP1-201ENST00000302528 DCP2Q8IU60 420 aaKnown RBP9.9□□□□□ -0.82
CLIP1-201ENST00000302528 OR2A12Q8NGT7 310 aa9.9□□□□□ -0.82
CLIP1-201ENST00000302528 C3orf49Q96BT1 292 aa9.9□□□□□ -0.82
CLIP1-201ENST00000302528 ST6GALNAC5Q9BVH7 336 aa9.9□□□□□ -0.82
CLIP1-201ENST00000302528 PLEKHJ1Q9NW61 149 aa9.9□□□□□ -0.82
CLIP1-201ENST00000302528 COQ3Q9NZJ6 369 aa9.9□□□□□ -0.82
CLIP1-201ENST00000302528 FMN2Q9NZ56 1722 aa9.9□□□□□ -0.83
CLIP1-201ENST00000302528 A0A1W2PS29 197 aa9.9□□□□□ -0.83
CLIP1-201ENST00000302528 FAM155AB1AL88 458 aaPredicted RBP9.9□□□□□ -0.83
CLIP1-201ENST00000302528 SCGB1D1O95968 90 aa9.9□□□□□ -0.83
CLIP1-201ENST00000302528 CD79AP11912 226 aa9.9□□□□□ -0.83
CLIP1-201ENST00000302528 BPIP17213 487 aa9.9□□□□□ -0.83
CLIP1-201ENST00000302528 PRKACAP17612 351 aa9.9□□□□□ -0.83
CLIP1-201ENST00000302528 DRD5P21918 477 aa9.9□□□□□ -0.83
CLIP1-201ENST00000302528 CD9P21926 228 aa9.9□□□□□ -0.83
CLIP1-201ENST00000302528 HRH2P25021 359 aa9.9□□□□□ -0.83
CLIP1-201ENST00000302528 THBS3P49746 956 aa9.9□□□□□ -0.83
CLIP1-201ENST00000302528 AFF3P51826 1226 aaKnown RBP9.9□□□□□ -0.83
CLIP1-201ENST00000302528 TAS2R31P59538 309 aa9.9□□□□□ -0.83
CLIP1-201ENST00000302528 ADARB1P78563 741 aaKnown RBP9.9□□□□□ -0.83
CLIP1-201ENST00000302528 GBX1Q14549 363 aa9.9□□□□□ -0.83
CLIP1-201ENST00000302528 CATSPEREQ5SY80 951 aa9.9□□□□□ -0.83
CLIP1-201ENST00000302528 HES5Q5TA89 166 aa9.9□□□□□ -0.83
CLIP1-201ENST00000302528 MCATQ8IVS2 390 aaKnown RBP9.9□□□□□ -0.83
CLIP1-201ENST00000302528 RAB39BQ96DA2 213 aa9.9□□□□□ -0.83
CLIP1-201ENST00000302528 LRR1Q96L50 414 aa9.9□□□□□ -0.83
CLIP1-201ENST00000302528 FBXL18Q96ME1 805 aa9.9□□□□□ -0.83
CLIP1-201ENST00000302528 CCDC106Q9BWC9 280 aa9.9□□□□□ -0.83
CLIP1-201ENST00000302528 RBM24Q9BX46 236 aaKnown RBP9.9□□□□□ -0.83
CLIP1-201ENST00000302528 SMCO4Q9NRQ5 59 aa9.9□□□□□ -0.83
CLIP1-201ENST00000302528 FAM118AQ9NWS6 357 aa9.9□□□□□ -0.83
CLIP1-201ENST00000302528 FAM53CQ9NYF3 392 aa9.9□□□□□ -0.83
CLIP1-201ENST00000302528 KLHL42Q9P2K6 505 aa9.9□□□□□ -0.83
CLIP1-201ENST00000302528 TNS2Q63HR2 1409 aa9.89□□□□□ -0.83
CLIP1-201ENST00000302528 SOBPA7XYQ1 873 aa9.89□□□□□ -0.83
CLIP1-201ENST00000302528 CEBPZOSA8MTT3 80 aa9.89□□□□□ -0.83
CLIP1-201ENST00000302528 ALDOBP05062 364 aa9.89□□□□□ -0.83
CLIP1-201ENST00000302528 TFPTP0C1Z6 253 aa9.89□□□□□ -0.83
CLIP1-201ENST00000302528 GPR4P46093 362 aa9.89□□□□□ -0.83
CLIP1-201ENST00000302528 PIGFQ07326 219 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 208.6 ms