RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 A0A0U1RQF3 1178 aa7.28□□□□□ -1.24
SF3B3-201ENST00000302516 ZNF850A8MQ14 1090 aa7.28□□□□□ -1.24
SF3B3-201ENST00000302516 KRBOX1C9JBD0 128 aa7.28□□□□□ -1.24
SF3B3-201ENST00000302516 AMY2AP04746 511 aa7.28□□□□□ -1.24
SF3B3-201ENST00000302516 FCER2P06734 321 aa7.28□□□□□ -1.24
SF3B3-201ENST00000302516 RNH1P13489 461 aaKnown RBP7.28□□□□□ -1.24
SF3B3-201ENST00000302516 THBS2P35442 1172 aa7.28□□□□□ -1.24
SF3B3-201ENST00000302516 ADH7P40394 386 aa7.28□□□□□ -1.24
SF3B3-201ENST00000302516 SLC26A5P58743 744 aa7.28□□□□□ -1.24
SF3B3-201ENST00000302516 RELAQ04206 551 aa7.28□□□□□ -1.24
SF3B3-201ENST00000302516 TMEM115Q12893 351 aaPredicted RBP7.28□□□□□ -1.24
SF3B3-201ENST00000302516 CDK5R2Q13319 367 aa7.28□□□□□ -1.24
SF3B3-201ENST00000302516 PEA15Q15121 130 aa7.28□□□□□ -1.24
SF3B3-201ENST00000302516 UPP1Q16831 310 aa7.28□□□□□ -1.24
SF3B3-201ENST00000302516 ZNF691Q5VV52 312 aa7.28□□□□□ -1.24
SF3B3-201ENST00000302516 AWAT2Q6E213 333 aa7.28□□□□□ -1.24
SF3B3-201ENST00000302516 DPY19L2P1Q6NXN4 242 aa7.28□□□□□ -1.24
SF3B3-201ENST00000302516 NIPAL3Q6P499 406 aa7.28□□□□□ -1.24
SF3B3-201ENST00000302516 C6orf120Q7Z4R8 191 aa7.28□□□□□ -1.24
SF3B3-201ENST00000302516 LMO3Q8TAP4 145 aa7.28□□□□□ -1.24
SF3B3-201ENST00000302516 SMPDL3BQ92485 455 aa7.28□□□□□ -1.24
SF3B3-201ENST00000302516 FOXRED1Q96CU9 486 aaPredicted RBP7.28□□□□□ -1.24
SF3B3-201ENST00000302516 TXN2Q99757 166 aa7.28□□□□□ -1.24
SF3B3-201ENST00000302516 IGSF5Q9NSI5 407 aa7.28□□□□□ -1.24
SF3B3-201ENST00000302516 TVP23AA6NH52 213 aa7.27□□□□□ -1.25
SF3B3-201ENST00000302516 A6NIZ1 184 aa7.27□□□□□ -1.25
SF3B3-201ENST00000302516 A8MXE2 369 aa7.27□□□□□ -1.25
SF3B3-201ENST00000302516 KLK3P07288 261 aaPredicted RBP7.27□□□□□ -1.25
SF3B3-201ENST00000302516 HAPLN1P10915 354 aaPredicted RBP7.27□□□□□ -1.25
SF3B3-201ENST00000302516 RAC2P15153 192 aa7.27□□□□□ -1.25
SF3B3-201ENST00000302516 RAP1BP61224 184 aa7.27□□□□□ -1.25
SF3B3-201ENST00000302516 RAP1AP62834 184 aa7.27□□□□□ -1.25
SF3B3-201ENST00000302516 LRRC37A5PQ49AS3 106 aa7.27□□□□□ -1.25
SF3B3-201ENST00000302516 CLVS2Q5SYC1 327 aa7.27□□□□□ -1.25
SF3B3-201ENST00000302516 SPRYD7Q5W111 196 aa7.27□□□□□ -1.25
SF3B3-201ENST00000302516 CNKSR3Q6P9H4 555 aa7.27□□□□□ -1.25
SF3B3-201ENST00000302516 SHDQ96IW2 340 aa7.27□□□□□ -1.25
SF3B3-201ENST00000302516 GAS2L1Q99501 681 aaPredicted RBP7.27□□□□□ -1.25
SF3B3-201ENST00000302516 SMOQ99835 787 aa7.27□□□□□ -1.25
SF3B3-201ENST00000302516 MKRN2Q9H000 416 aaKnown RBP7.27□□□□□ -1.25
SF3B3-201ENST00000302516 ZNF175Q9Y473 711 aa7.27□□□□□ -1.25
SF3B3-201ENST00000302516 NRAPQ86VF7 1730 aa7.27□□□□□ -1.25
SF3B3-201ENST00000302516 FOCADQ5VW36 1801 aa7.27□□□□□ -1.25
SF3B3-201ENST00000302516 MAT2AP31153 395 aaKnown RBP7.27□□□□□ -1.25
SF3B3-201ENST00000302516 CDKN2DP55273 166 aa7.27□□□□□ -1.25
SF3B3-201ENST00000302516 SLC35F2Q8IXU6 374 aa7.27□□□□□ -1.25
SF3B3-201ENST00000302516 OR2T35Q8NGX2 323 aa7.27□□□□□ -1.25
SF3B3-201ENST00000302516 DAZLQ92904 295 aaKnown RBP7.27□□□□□ -1.25
SF3B3-201ENST00000302516 OR2M4Q96R27 311 aa7.27□□□□□ -1.25
SF3B3-201ENST00000302516 ZNF587Q96SQ5 575 aaPredicted RBP7.27□□□□□ -1.25
SF3B3-201ENST00000302516 TSPAN10Q9H1Z9 355 aaPredicted RBP7.27□□□□□ -1.25
SF3B3-201ENST00000302516 SAV1Q9H4B6 383 aaPredicted RBP7.27□□□□□ -1.25
SF3B3-201ENST00000302516 ZNF226Q9NYT6 803 aa7.27□□□□□ -1.25
SF3B3-201ENST00000302516 FZD1Q9UP38 647 aa7.27□□□□□ -1.25
SF3B3-201ENST00000302516 UBE2J1Q9Y385 318 aaPredicted RBP7.27□□□□□ -1.25
SF3B3-201ENST00000302516 EFCAB7A8K855 629 aa7.27□□□□□ -1.25
SF3B3-201ENST00000302516 ZNF736B4DX44 427 aaPredicted RBP7.27□□□□□ -1.25
SF3B3-201ENST00000302516 SOX1O00570 391 aaPredicted RBP7.27□□□□□ -1.25
SF3B3-201ENST00000302516 POLR1CO15160 346 aaPredicted RBP7.27□□□□□ -1.25
SF3B3-201ENST00000302516 BEST1O76090 585 aa7.27□□□□□ -1.25
SF3B3-201ENST00000302516 CDK1P06493 297 aa7.27□□□□□ -1.25
SF3B3-201ENST00000302516 RAP2BP61225 183 aa7.27□□□□□ -1.25
SF3B3-201ENST00000302516 PLGLB1Q02325 96 aa7.27□□□□□ -1.25
SF3B3-201ENST00000302516 PCGF3Q3KNV8 242 aa7.27□□□□□ -1.25
SF3B3-201ENST00000302516 ACTBL2Q562R1 376 aa7.27□□□□□ -1.25
SF3B3-201ENST00000302516 ZNF461Q8TAF7 563 aa7.27□□□□□ -1.25
SF3B3-201ENST00000302516 C2orf42Q9NWW7 574 aa7.27□□□□□ -1.25
SF3B3-201ENST00000302516 FBXL12Q9NXK8 326 aa7.27□□□□□ -1.25
SF3B3-201ENST00000302516 KCNIP1Q9NZI2 227 aa7.27□□□□□ -1.25
SF3B3-201ENST00000302516 KLHL42Q9P2K6 505 aa7.27□□□□□ -1.25
SF3B3-201ENST00000302516 KIF25Q9UIL4 384 aa7.27□□□□□ -1.25
SF3B3-201ENST00000302516 NAALAD2Q9Y3Q0 740 aa7.27□□□□□ -1.25
SF3B3-201ENST00000302516 PCDHAC2Q9Y5I4 1007 aa7.27□□□□□ -1.25
SF3B3-201ENST00000302516 DNMT3AQ9Y6K1 912 aaPredicted RBP7.27□□□□□ -1.25
SF3B3-201ENST00000302516 PRSS3P35030 304 aa7.27□□□□□ -1.25
SF3B3-201ENST00000302516 LUMP51884 338 aaPredicted RBP7.27□□□□□ -1.25
SF3B3-201ENST00000302516 SSTP61278 116 aa7.27□□□□□ -1.25
SF3B3-201ENST00000302516 CDK3Q00526 305 aa7.27□□□□□ -1.25
SF3B3-201ENST00000302516 IRF4Q15306 451 aa7.27□□□□□ -1.25
SF3B3-201ENST00000302516 ODF4Q2M2E3 257 aa7.27□□□□□ -1.25
SF3B3-201ENST00000302516 EEF1AKMT2Q5JPI9 291 aaKnown RBP7.27□□□□□ -1.25
SF3B3-201ENST00000302516 SLC35F1Q5T1Q4 408 aa7.27□□□□□ -1.25
SF3B3-201ENST00000302516 OR10Q1Q8NGQ4 319 aa7.27□□□□□ -1.25
SF3B3-201ENST00000302516 OR5W2Q8NH69 310 aa7.27□□□□□ -1.25
SF3B3-201ENST00000302516 FAM46AQ96IP4 442 aaKnown RBP7.27□□□□□ -1.25
SF3B3-201ENST00000302516 FEVQ99581 238 aa7.27□□□□□ -1.25
SF3B3-201ENST00000302516 GFOD1Q9NXC2 390 aa7.27□□□□□ -1.25
SF3B3-201ENST00000302516 CKMT1AP12532 417 aa7.27□□□□□ -1.25
SF3B3-201ENST00000302516 HTR3AP46098 478 aa7.27□□□□□ -1.25
SF3B3-201ENST00000302516 OR4D2P58180 307 aa7.27□□□□□ -1.25
SF3B3-201ENST00000302516 LAPTM4AQ15012 233 aa7.27□□□□□ -1.25
SF3B3-201ENST00000302516 AMZ1Q400G9 498 aa7.27□□□□□ -1.25
SF3B3-201ENST00000302516 KCTD20Q7Z5Y7 419 aa7.27□□□□□ -1.25
SF3B3-201ENST00000302516 IGFN1Q86VF2 1251 aa7.27□□□□□ -1.25
SF3B3-201ENST00000302516 ZNF366Q8N895 744 aa7.27□□□□□ -1.25
SF3B3-201ENST00000302516 DLEC1Q9Y238 1755 aa7.27□□□□□ -1.25
SF3B3-201ENST00000302516 A0A0D9SG52 128 aa7.27□□□□□ -1.25
SF3B3-201ENST00000302516 SLC35F4A4IF30 521 aa7.27□□□□□ -1.25
SF3B3-201ENST00000302516 G3V2L1 256 aa7.27□□□□□ -1.25
SF3B3-201ENST00000302516 GALTP07902 379 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 149.1 ms