RNA–Protein interactions for RNA: ENST00000301475.1

ZNF558-201, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF558, Length 3,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-201ENST00000301475 ST3GAL2Q16842 350 aa10.26□□□□□ -0.77
ZNF558-201ENST00000301475 TUSC1Q2TAM9 212 aa10.26□□□□□ -0.77
ZNF558-201ENST00000301475 MINDY4Q4G0A6 757 aa10.26□□□□□ -0.77
ZNF558-201ENST00000301475 ADGRF1Q5T601 910 aa10.26□□□□□ -0.77
ZNF558-201ENST00000301475 BHLHB9Q6PI77 547 aa10.26□□□□□ -0.77
ZNF558-201ENST00000301475 AGTRAPQ6RW13 159 aa10.26□□□□□ -0.77
ZNF558-201ENST00000301475 IQCHQ86VS3 1027 aa10.26□□□□□ -0.77
ZNF558-201ENST00000301475 OR4K5Q8NGD3 323 aa10.26□□□□□ -0.77
ZNF558-201ENST00000301475 C16orf78Q8WTQ4 265 aa10.26□□□□□ -0.77
ZNF558-201ENST00000301475 NXPE2Q96DL1 559 aa10.26□□□□□ -0.77
ZNF558-201ENST00000301475 TEFMQ96QE5 360 aaKnown RBP10.26□□□□□ -0.77
ZNF558-201ENST00000301475 OR2M2Q96R28 347 aa10.26□□□□□ -0.77
ZNF558-201ENST00000301475 ABHD1Q96SE0 405 aa10.26□□□□□ -0.77
ZNF558-201ENST00000301475 TMEM175Q9BSA9 504 aa10.26□□□□□ -0.77
ZNF558-201ENST00000301475 SYNDIG1Q9H7V2 258 aa10.26□□□□□ -0.77
ZNF558-201ENST00000301475 MAN2C1Q9NTJ4 1040 aa10.26□□□□□ -0.77
ZNF558-201ENST00000301475 LYARQ9NX58 379 aaKnown RBP10.26□□□□□ -0.77
ZNF558-201ENST00000301475 STOX2Q9P2F5 926 aaPredicted RBP10.26□□□□□ -0.77
ZNF558-201ENST00000301475 EXOSC1Q9Y3B2 195 aaKnown RBP10.26□□□□□ -0.77
ZNF558-201ENST00000301475 TMEM88BA6NKF7 163 aa10.26□□□□□ -0.77
ZNF558-201ENST00000301475 PCP4L1A6NKN8 68 aa10.26□□□□□ -0.77
ZNF558-201ENST00000301475 SLC38A8A6NNN8 435 aa10.26□□□□□ -0.77
ZNF558-201ENST00000301475 M0R3H8 397 aa10.26□□□□□ -0.77
ZNF558-201ENST00000301475 SLC16A5O15375 505 aa10.26□□□□□ -0.77
ZNF558-201ENST00000301475 SULT1A3P0DMM9 295 aa10.26□□□□□ -0.77
ZNF558-201ENST00000301475 SULT1A4P0DMN0 295 aa10.26□□□□□ -0.77
ZNF558-201ENST00000301475 TAP2Q03519 686 aa10.26□□□□□ -0.77
ZNF558-201ENST00000301475 SLC36A2Q495M3 483 aa10.26□□□□□ -0.77
ZNF558-201ENST00000301475 CLLU1OSQ5K130 101 aa10.26□□□□□ -0.77
ZNF558-201ENST00000301475 FAM71E1Q6IPT2 247 aa10.26□□□□□ -0.77
ZNF558-201ENST00000301475 LYPD4Q6UWN0 246 aa10.26□□□□□ -0.77
ZNF558-201ENST00000301475 TMPRSS11BQ86T26 416 aa10.26□□□□□ -0.77
ZNF558-201ENST00000301475 SERINC5Q86VE9 423 aa10.26□□□□□ -0.77
ZNF558-201ENST00000301475 RASGRP3Q8IV61 690 aa10.26□□□□□ -0.77
ZNF558-201ENST00000301475 ZNF687Q8N1G0 1237 aa10.26□□□□□ -0.77
ZNF558-201ENST00000301475 LMNTD1Q8N9Z9 388 aa10.26□□□□□ -0.77
ZNF558-201ENST00000301475 OR8D4Q8NGM9 314 aa10.26□□□□□ -0.77
ZNF558-201ENST00000301475 OR8K5Q8NH50 307 aa10.26□□□□□ -0.77
ZNF558-201ENST00000301475 NEIL2Q969S2 332 aa10.26□□□□□ -0.77
ZNF558-201ENST00000301475 ZNF649Q9BS31 505 aa10.26□□□□□ -0.77
ZNF558-201ENST00000301475 OR51B5Q9H339 312 aa10.26□□□□□ -0.77
ZNF558-201ENST00000301475 DPAGT1Q9H3H5 408 aa10.26□□□□□ -0.77
ZNF558-201ENST00000301475 TNFRSF10DQ9UBN6 386 aa10.26□□□□□ -0.77
ZNF558-201ENST00000301475 PPIEQ9UNP9 301 aaKnown RBP10.26□□□□□ -0.77
ZNF558-201ENST00000301475 SH2B3Q9UQQ2 575 aa10.26□□□□□ -0.77
ZNF558-201ENST00000301475 MAB21L2Q9Y586 359 aa10.26□□□□□ -0.77
ZNF558-201ENST00000301475 CDH23Q9H251 3354 aa10.26□□□□□ -0.77
ZNF558-201ENST00000301475 hCG_1807616A0A1W2PRN6 198 aa10.25□□□□□ -0.77
ZNF558-201ENST00000301475 GSAPA4D1B5 854 aa10.25□□□□□ -0.77
ZNF558-201ENST00000301475 C5orf58C9J3I9 102 aa10.25□□□□□ -0.77
ZNF558-201ENST00000301475 TBL1XO60907 577 aa10.25□□□□□ -0.77
ZNF558-201ENST00000301475 ATG13O75143 517 aa10.25□□□□□ -0.77
ZNF558-201ENST00000301475 CFL1P23528 166 aaKnown RBP10.25□□□□□ -0.77
ZNF558-201ENST00000301475 HOXD10P28358 340 aa10.25□□□□□ -0.77
ZNF558-201ENST00000301475 CCND3P30281 292 aaPredicted RBP10.25□□□□□ -0.77
ZNF558-201ENST00000301475 CCR6P51684 374 aa10.25□□□□□ -0.77
ZNF558-201ENST00000301475 SREBF2Q12772 1141 aa10.25□□□□□ -0.77
ZNF558-201ENST00000301475 FZD5Q13467 585 aa10.25□□□□□ -0.77
ZNF558-201ENST00000301475 ZNF273Q14593 569 aa10.25□□□□□ -0.77
ZNF558-201ENST00000301475 RNASE12Q5GAN4 147 aaKnown RBP10.25□□□□□ -0.77
ZNF558-201ENST00000301475 LRRC73Q5JTD7 316 aa10.25□□□□□ -0.77
ZNF558-201ENST00000301475 SLC36A4Q6YBV0 504 aa10.25□□□□□ -0.77
ZNF558-201ENST00000301475 LRRC28Q86X40 367 aaPredicted RBP10.25□□□□□ -0.77
ZNF558-201ENST00000301475 LSM14AQ8ND56 463 aaKnown RBP10.25□□□□□ -0.77
ZNF558-201ENST00000301475 SRFBP1Q8NEF9 429 aaKnown RBP10.25□□□□□ -0.77
ZNF558-201ENST00000301475 TRPV1Q8NER1 839 aa10.25□□□□□ -0.77
ZNF558-201ENST00000301475 OR2T4Q8NH00 348 aa10.25□□□□□ -0.77
ZNF558-201ENST00000301475 VOPP1Q96AW1 172 aa10.25□□□□□ -0.77
ZNF558-201ENST00000301475 SLC6A16Q9GZN6 736 aa10.25□□□□□ -0.77
ZNF558-201ENST00000301475 SLAMF7Q9NQ25 335 aa10.25□□□□□ -0.77
ZNF558-201ENST00000301475 CTPS2Q9NRF8 586 aa10.25□□□□□ -0.77
ZNF558-201ENST00000301475 CD84Q9UIB8 345 aa10.25□□□□□ -0.77
ZNF558-201ENST00000301475 ZFR2Q9UPR6 939 aaKnown RBP10.25□□□□□ -0.77
ZNF558-201ENST00000301475 RANBP2P49792 3224 aaKnown RBP10.25□□□□□ -0.77
ZNF558-201ENST00000301475 NUPL2O15504 423 aaKnown RBP10.25□□□□□ -0.77
ZNF558-201ENST00000301475 NDUFA2O43678 99 aa10.25□□□□□ -0.77
ZNF558-201ENST00000301475 SLC16A8O95907 504 aa10.25□□□□□ -0.77
ZNF558-201ENST00000301475 TGFB1P01137 390 aa10.25□□□□□ -0.77
ZNF558-201ENST00000301475 GAAP10253 952 aa10.25□□□□□ -0.77
ZNF558-201ENST00000301475 GIFP27352 417 aa10.25□□□□□ -0.77
ZNF558-201ENST00000301475 IMPA1P29218 277 aa10.25□□□□□ -0.77
ZNF558-201ENST00000301475 THBS2P35442 1172 aa10.25□□□□□ -0.77
ZNF558-201ENST00000301475 RAB14P61106 215 aa10.25□□□□□ -0.77
ZNF558-201ENST00000301475 COX10Q12887 443 aa10.25□□□□□ -0.77
ZNF558-201ENST00000301475 GSG1Q2KHT4 349 aa10.25□□□□□ -0.77
ZNF558-201ENST00000301475 PLEKHS1Q5SXH7 462 aa10.25□□□□□ -0.77
ZNF558-201ENST00000301475 OLIG3Q7RTU3 272 aa10.25□□□□□ -0.77
ZNF558-201ENST00000301475 KANSL1Q7Z3B3 1105 aa10.25□□□□□ -0.77
ZNF558-201ENST00000301475 OAFQ86UD1 273 aa10.25□□□□□ -0.77
ZNF558-201ENST00000301475 LSRQ86X29 649 aaPredicted RBP10.25□□□□□ -0.77
ZNF558-201ENST00000301475 APCDD1Q8J025 514 aa10.25□□□□□ -0.77
ZNF558-201ENST00000301475 LILRA3Q8N6C8 439 aaPredicted RBP10.25□□□□□ -0.77
ZNF558-201ENST00000301475 SAMD12Q8N8I0 201 aa10.25□□□□□ -0.77
ZNF558-201ENST00000301475 C7orf57Q8NEG2 295 aa10.25□□□□□ -0.77
ZNF558-201ENST00000301475 OR6M1Q8NGM8 313 aa10.25□□□□□ -0.77
ZNF558-201ENST00000301475 GIMAP1Q8WWP7 306 aa10.25□□□□□ -0.77
ZNF558-201ENST00000301475 SMG7Q92540 1137 aaKnown RBP10.25□□□□□ -0.77
ZNF558-201ENST00000301475 ALG14Q96F25 216 aa10.25□□□□□ -0.77
ZNF558-201ENST00000301475 SECISBP2Q96T21 854 aaKnown RBP10.25□□□□□ -0.77
ZNF558-201ENST00000301475 GPR62Q9BZJ7 368 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms