RNA–Protein interactions for RNA: ENST00000299333.7

SCN3B-201, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-201ENST00000299333 J3QR89 54 aa14.16□□□□□ -0.14
SCN3B-201ENST00000299333 SHOXO15266 292 aa14.16□□□□□ -0.14
SCN3B-201ENST00000299333 PMM2O15305 246 aa14.16□□□□□ -0.14
SCN3B-201ENST00000299333 RIDAP52758 137 aaKnown RBP14.16□□□□□ -0.14
SCN3B-201ENST00000299333 CDK3Q00526 305 aa14.16□□□□□ -0.14
SCN3B-201ENST00000299333 PLGLB1Q02325 96 aa14.16□□□□□ -0.14
SCN3B-201ENST00000299333 GALNT2Q10471 571 aa14.16□□□□□ -0.14
SCN3B-201ENST00000299333 IGSF11Q5DX21 431 aa14.16□□□□□ -0.14
SCN3B-201ENST00000299333 OR52E2Q8NGJ4 325 aa14.16□□□□□ -0.14
SCN3B-201ENST00000299333 FAM46AQ96IP4 442 aaKnown RBP14.16□□□□□ -0.14
SCN3B-201ENST00000299333 RDH14Q9HBH5 336 aa14.16□□□□□ -0.14
SCN3B-201ENST00000299333 POPDC3Q9HBV1 291 aa14.16□□□□□ -0.14
SCN3B-201ENST00000299333 NLE1Q9NVX2 485 aaPredicted RBP14.16□□□□□ -0.14
SCN3B-201ENST00000299333 GPRC5BQ9NZH0 403 aa14.16□□□□□ -0.14
SCN3B-201ENST00000299333 IL20RAQ9UHF4 553 aa14.16□□□□□ -0.14
SCN3B-201ENST00000299333 MEIS3P2A8K0S8 358 aa14.16□□□□□ -0.14
SCN3B-201ENST00000299333 ZNF701M0R085 212 aaPredicted RBP14.16□□□□□ -0.14
SCN3B-201ENST00000299333 B4GAT1O43505 415 aa14.16□□□□□ -0.14
SCN3B-201ENST00000299333 PRSS3P35030 304 aa14.16□□□□□ -0.14
SCN3B-201ENST00000299333 BIDP55957 195 aa14.16□□□□□ -0.14
SCN3B-201ENST00000299333 MS4A2Q01362 244 aa14.16□□□□□ -0.14
SCN3B-201ENST00000299333 CRYZQ08257 329 aaKnown RBP14.16□□□□□ -0.14
SCN3B-201ENST00000299333 BCL7AQ4VC05 210 aa14.16□□□□□ -0.14
SCN3B-201ENST00000299333 TIGD5Q53EQ6 642 aa14.16□□□□□ -0.14
SCN3B-201ENST00000299333 ZNF585AQ6P3V2 769 aa14.16□□□□□ -0.14
SCN3B-201ENST00000299333 CHFRQ96EP1 664 aa14.16□□□□□ -0.14
SCN3B-201ENST00000299333 PGAM5Q96HS1 289 aa14.16□□□□□ -0.14
SCN3B-201ENST00000299333 PEBP4Q96S96 227 aa14.16□□□□□ -0.14
SCN3B-201ENST00000299333 SMIM3Q9BZL3 60 aa14.16□□□□□ -0.14
SCN3B-201ENST00000299333 SERTAD4Q9NUC0 356 aa14.16□□□□□ -0.14
SCN3B-201ENST00000299333 MSRAQ9UJ68 235 aa14.16□□□□□ -0.14
SCN3B-201ENST00000299333 EPHA1P21709 976 aa14.16□□□□□ -0.14
SCN3B-201ENST00000299333 GABRA3P34903 492 aa14.16□□□□□ -0.14
SCN3B-201ENST00000299333 TPMTP51580 245 aa14.16□□□□□ -0.14
SCN3B-201ENST00000299333 LRIF1Q5T3J3 769 aa14.16□□□□□ -0.14
SCN3B-201ENST00000299333 TMEM150AQ86TG1 271 aa14.16□□□□□ -0.14
SCN3B-201ENST00000299333 SLAIN1Q8ND83 568 aa14.16□□□□□ -0.14
SCN3B-201ENST00000299333 OR9A1PQ8NGU1 263 aa14.16□□□□□ -0.14
SCN3B-201ENST00000299333 CYB5D2Q8WUJ1 264 aa14.16□□□□□ -0.14
SCN3B-201ENST00000299333 SORCS1Q8WY21 1168 aa14.16□□□□□ -0.14
SCN3B-201ENST00000299333 KCNJ9Q92806 393 aa14.16□□□□□ -0.14
SCN3B-201ENST00000299333 MOAP1Q96BY2 351 aa14.16□□□□□ -0.14
SCN3B-201ENST00000299333 ZBED3Q96IU2 234 aaPredicted RBP14.16□□□□□ -0.14
SCN3B-201ENST00000299333 HEBP1Q9NRV9 189 aa14.16□□□□□ -0.14
SCN3B-201ENST00000299333 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.16□□□□□ -0.14
SCN3B-201ENST00000299333 SAGE1Q9NXZ1 904 aa14.16□□□□□ -0.14
SCN3B-201ENST00000299333 ASB4Q9Y574 426 aa14.16□□□□□ -0.14
SCN3B-201ENST00000299333 PRAF2O60831 178 aa14.16□□□□□ -0.14
SCN3B-201ENST00000299333 PIGRP01833 764 aa14.16□□□□□ -0.14
SCN3B-201ENST00000299333 HRGP04196 525 aa14.16□□□□□ -0.14
SCN3B-201ENST00000299333 GMPRP36959 345 aa14.16□□□□□ -0.14
SCN3B-201ENST00000299333 CSNK2A1P68400 391 aaPredicted RBP14.16□□□□□ -0.14
SCN3B-201ENST00000299333 PEA15Q15121 130 aa14.16□□□□□ -0.14
SCN3B-201ENST00000299333 AWAT2Q6E213 333 aa14.16□□□□□ -0.14
SCN3B-201ENST00000299333 TMEM225Q6GV28 225 aa14.16□□□□□ -0.14
SCN3B-201ENST00000299333 CSNK2A3Q8NEV1 391 aa14.16□□□□□ -0.14
SCN3B-201ENST00000299333 SGTBQ96EQ0 304 aa14.16□□□□□ -0.14
SCN3B-201ENST00000299333 TLE6Q9H808 572 aa14.16□□□□□ -0.14
SCN3B-201ENST00000299333 MEIS3P1A6NDR6 274 aa14.15□□□□□ -0.14
SCN3B-201ENST00000299333 ATE1O95260 518 aa14.15□□□□□ -0.14
SCN3B-201ENST00000299333 IL33O95760 270 aa14.15□□□□□ -0.14
SCN3B-201ENST00000299333 NDUFS1P28331 727 aa14.15□□□□□ -0.14
SCN3B-201ENST00000299333 BEX5Q5H9J7 111 aa14.15□□□□□ -0.14
SCN3B-201ENST00000299333 OR52E8Q6IFG1 317 aa14.15□□□□□ -0.14
SCN3B-201ENST00000299333 ZNF439Q8NDP4 499 aa14.15□□□□□ -0.14
SCN3B-201ENST00000299333 FBXL18Q96ME1 805 aa14.15□□□□□ -0.14
SCN3B-201ENST00000299333 TMEM98Q9Y2Y6 226 aa14.15□□□□□ -0.14
SCN3B-201ENST00000299333 NME4O00746 187 aa14.15□□□□□ -0.14
SCN3B-201ENST00000299333 MT-ND4P03905 459 aa14.15□□□□□ -0.14
SCN3B-201ENST00000299333 TNFRSF1BP20333 461 aa14.15□□□□□ -0.14
SCN3B-201ENST00000299333 FXYD4P59646 89 aa14.15□□□□□ -0.14
SCN3B-201ENST00000299333 ZNF679Q8IYX0 411 aa14.15□□□□□ -0.14
SCN3B-201ENST00000299333 FBXO22Q8NEZ5 403 aa14.15□□□□□ -0.14
SCN3B-201ENST00000299333 NUP43Q8NFH3 380 aa14.15□□□□□ -0.14
SCN3B-201ENST00000299333 HMGB4Q8WW32 186 aa14.15□□□□□ -0.14
SCN3B-201ENST00000299333 TXN2Q99757 166 aa14.15□□□□□ -0.14
SCN3B-201ENST00000299333 COL5A2P05997 1499 aaPredicted RBP14.15□□□□□ -0.14
SCN3B-201ENST00000299333 A0A1W2PQ09 198 aa14.15□□□□□ -0.14
SCN3B-201ENST00000299333 RAB3DO95716 219 aa14.15□□□□□ -0.14
SCN3B-201ENST00000299333 HSD17B1P14061 328 aa14.15□□□□□ -0.14
SCN3B-201ENST00000299333 RSU1Q15404 277 aa14.15□□□□□ -0.14
SCN3B-201ENST00000299333 LCN10Q6JVE6 187 aa14.15□□□□□ -0.14
SCN3B-201ENST00000299333 Q6ZVU0 165 aa14.15□□□□□ -0.14
SCN3B-201ENST00000299333 SSX7Q7RTT5 188 aa14.15□□□□□ -0.14
SCN3B-201ENST00000299333 DCP2Q8IU60 420 aaKnown RBP14.15□□□□□ -0.14
SCN3B-201ENST00000299333 TOMM40LQ969M1 308 aa14.15□□□□□ -0.14
SCN3B-201ENST00000299333 ZNF578Q96N58 590 aaPredicted RBP14.15□□□□□ -0.14
SCN3B-201ENST00000299333 TMEM248Q9NWD8 314 aa14.15□□□□□ -0.14
SCN3B-201ENST00000299333 TRAV20A0A0B4J274 112 aa14.15□□□□□ -0.14
SCN3B-201ENST00000299333 FAM230AA0A1W2PPH8 454 aa14.15□□□□□ -0.14
SCN3B-201ENST00000299333 A8MXE2 369 aa14.15□□□□□ -0.14
SCN3B-201ENST00000299333 CSTAP01040 98 aa14.15□□□□□ -0.14
SCN3B-201ENST00000299333 HOXA10P31260 410 aaPredicted RBP14.15□□□□□ -0.14
SCN3B-201ENST00000299333 HNF1BP35680 557 aa14.15□□□□□ -0.14
SCN3B-201ENST00000299333 HYAL4Q2M3T9 481 aa14.15□□□□□ -0.14
SCN3B-201ENST00000299333 TRAM1L1Q8N609 369 aa14.15□□□□□ -0.14
SCN3B-201ENST00000299333 OR52P1PQ8NH57 321 aa14.15□□□□□ -0.14
SCN3B-201ENST00000299333 SYT3Q9BQG1 590 aa14.15□□□□□ -0.14
SCN3B-201ENST00000299333 ZDHHC4Q9NPG8 344 aa14.15□□□□□ -0.14
SCN3B-201ENST00000299333 MEPEQ9NQ76 525 aaPredicted RBP14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms